Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013873.1-P | Field mustard | nucleus | 92.9 | 91.34 |
| CDX92682 | Canola | nucleus | 66.19 | 62.97 |
| CDY11061 | Canola | nucleus | 63.92 | 61.64 |
| CDX94469 | Canola | nucleus | 21.31 | 55.56 |
| AT4G25210.1 | Thale cress | nucleus | 44.6 | 42.66 |
| AT4G00130.1 | Thale cress | mitochondrion | 19.89 | 36.08 |
| CDY52323 | Canola | nucleus | 14.49 | 30.18 |
| CDY32382 | Canola | nucleus | 22.73 | 28.37 |
| CDY27657 | Canola | nucleus | 23.3 | 26.97 |
| CDX97966 | Canola | nucleus | 24.72 | 26.52 |
| CDY12911 | Canola | nucleus | 14.49 | 26.42 |
| CDY07275 | Canola | nucleus | 26.14 | 25.7 |
| CDY68087 | Canola | nucleus | 22.16 | 25.32 |
| CDY01140 | Canola | nucleus | 19.6 | 25.0 |
| CDY18747 | Canola | nucleus | 25.28 | 24.93 |
| CDY61958 | Canola | nucleus | 25.57 | 24.79 |
| CDX99698 | Canola | nucleus | 20.74 | 23.7 |
| CDY49787 | Canola | nucleus | 24.43 | 23.18 |
| KRH10688 | Soybean | nucleus | 25.85 | 20.82 |
| KRH57853 | Soybean | nucleus | 22.73 | 20.67 |
| KRH21647 | Soybean | nucleus | 25.0 | 19.64 |
| CDY21105 | Canola | nucleus | 19.6 | 19.38 |
| PGSC0003DMT400079215 | Potato | nucleus | 21.88 | 19.3 |
| CDY50767 | Canola | nucleus | 21.02 | 18.27 |
| CDY00009 | Canola | nucleus | 20.17 | 18.02 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.74 | 17.72 |
| CDX80681 | Canola | nucleus | 20.45 | 17.52 |
| CDY30023 | Canola | nucleus | 19.32 | 16.87 |
| CDY41910 | Canola | nucleus | 20.17 | 16.71 |
| Os09t0451700-00 | Rice | nucleus | 7.67 | 15.0 |
| CDY26346 | Canola | nucleus | 17.05 | 14.56 |
| KXG25358 | Sorghum | nucleus, plastid | 17.61 | 14.25 |
| CDY68986 | Canola | nucleus | 13.35 | 13.86 |
| EER96833 | Sorghum | nucleus | 16.48 | 13.12 |
| Zm00001d020688_P001 | Maize | nucleus | 15.06 | 12.38 |
| Zm00001d005865_P001 | Maize | nucleus | 15.34 | 12.33 |
| Zm00001d049991_P001 | Maize | nucleus, plastid | 15.91 | 12.28 |
| TraesCS5B01G233000.1 | Wheat | nucleus | 15.62 | 11.25 |
| TraesCS5D01G241400.1 | Wheat | nucleus | 15.34 | 11.02 |
| CDX86188 | Canola | cytosol | 18.75 | 10.96 |
| TraesCS5A01G234500.1 | Wheat | nucleus | 14.2 | 10.2 |
| HORVU5Hr1G067630.1 | Barley | nucleus | 13.92 | 10.0 |
| Os08t0467600-00 | Rice | nucleus | 14.2 | 9.4 |
| VIT_00s0999g00010.t01 | Wine grape | cytosol, nucleus | 5.4 | 3.15 |
Protein Annotations
| EnsemblPlants:CDX89436 | EnsemblPlantsGene:GSBRNA2T00149687001 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | ncoils:Coil | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF1 |
| PFAM:PF04504 | ProteinID:CDX89436 | ProteinID:CDX89436.1 | SEG:seg | UniParc:UPI0004EF0939 | MapMan:15.5.28 |
Description
BnaA01g14570D
Coordinates
chrLK031858:-:1599131..1600479
Molecular Weight (calculated)
38726.5 Da
IEP (calculated)
6.590
GRAVY (calculated)
-0.798
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPKDKIENP PAAASSSEEE EEEEESGSSV EASGSSSDDE AGHVQSKLTQ KPPKKKPDSD SEEDESDSDS APPTKTKPLN AVVTSGSVPE SSTAKRSLKQ
101: ADEEPKNKKV KTSATEQEVV KKISGEDAKK MFQRLFSETD EIAMLQGFLD FTSTRGDPYE NMDAFCDYVK TLIDFNASKA QIVTKLQRCK KKFVNIVKNA
201: LKKGRTEDKV TCSKDLDQKA FELSRKIWGA NGVLPAKPRK KFNDVVKSPP SPSHTPKKEV EKRKGSVVVD AQLSSSREVA LFFKAANVSV FGLDESTVSA
301: VWDMVEDGAK KREVEEKLKK LKDMQVELCL QRTALLDTTA KMIFKDNASS ST
101: ADEEPKNKKV KTSATEQEVV KKISGEDAKK MFQRLFSETD EIAMLQGFLD FTSTRGDPYE NMDAFCDYVK TLIDFNASKA QIVTKLQRCK KKFVNIVKNA
201: LKKGRTEDKV TCSKDLDQKA FELSRKIWGA NGVLPAKPRK KFNDVVKSPP SPSHTPKKEV EKRKGSVVVD AQLSSSREVA LFFKAANVSV FGLDESTVSA
301: VWDMVEDGAK KREVEEKLKK LKDMQVELCL QRTALLDTTA KMIFKDNASS ST
001: MAPKKAEEVV ESPPVSSEEE ESGSSGEESE SSAEVPKKVE SSQKPESDSE GESESESSSG PEPESEPAKT IKLKPVGTKP IPETSGSAAT VPESSTAKRP
101: LKEAAPEAIK KQKTSDTEHV KKPITNDEVK KISSEDAKKM FQRLFSETDE IALLQGIIDF TSTKGDPYED IDAFCIYVKK LIDFDATKNQ IVTKLQRLKK
201: KFNNAVKNSL KKGKTEDDIE FAKDLEQKGF ELSRKIWGSN GVLVTGKSSR KKVGGTPAPK EMKLVAHSTP KKQQEEAKKP ERTEAKVVNT GLSIGKEIAS
301: FLNADNGSSC GLDESTLTAV WAKVADGAEK REVEEKWKKL KAKQFELCLQ RSGLVNETAK MIFKAYES
101: LKEAAPEAIK KQKTSDTEHV KKPITNDEVK KISSEDAKKM FQRLFSETDE IALLQGIIDF TSTKGDPYED IDAFCIYVKK LIDFDATKNQ IVTKLQRLKK
201: KFNNAVKNSL KKGKTEDDIE FAKDLEQKGF ELSRKIWGSN GVLVTGKSSR KKVGGTPAPK EMKLVAHSTP KKQQEEAKKP ERTEAKVVNT GLSIGKEIAS
301: FLNADNGSSC GLDESTLTAV WAKVADGAEK REVEEKWKKL KAKQFELCLQ RSGLVNETAK MIFKAYES
Arabidopsis Description
GEBPLGLABROUS1 enhancer-binding protein-like [Source:UniProtKB/Swiss-Prot;Acc:Q9SB42]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.