Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
23777608
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d005865_P001 | Maize | nucleus | 42.78 | 17.58 |
| EER96833 | Sorghum | nucleus | 42.78 | 17.42 |
| TraesCS5D01G241400.1 | Wheat | nucleus | 47.22 | 17.35 |
| TraesCS5A01G234500.1 | Wheat | nucleus | 47.22 | 17.35 |
| TraesCS5B01G233000.1 | Wheat | nucleus | 46.11 | 16.97 |
| HORVU5Hr1G067630.1 | Barley | nucleus | 45.56 | 16.73 |
| Zm00001d020688_P001 | Maize | nucleus | 38.33 | 16.12 |
| CDY32382 | Canola | nucleus | 24.44 | 15.6 |
| Os07t0636100-01 | Rice | nucleus | 21.67 | 15.54 |
| Os08t0467600-00 | Rice | nucleus | 42.78 | 14.47 |
| Bra021317.1-P | Field mustard | nucleus | 24.44 | 14.29 |
| CDY12911 | Canola | nucleus | 15.0 | 13.99 |
| CDX99698 | Canola | nucleus | 23.89 | 13.96 |
| Bra025445.1-P | Field mustard | nucleus | 22.78 | 13.36 |
| AT2G01370.1 | Thale cress | mitochondrion | 17.78 | 12.7 |
| CDY27657 | Canola | nucleus | 21.11 | 12.5 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.33 | 12.38 |
| Bra031402.1-P | Field mustard | nucleus | 22.78 | 12.35 |
| PGSC0003DMT400079215 | Potato | nucleus | 27.22 | 12.28 |
| CDX97966 | Canola | nucleus | 22.22 | 12.2 |
| Bra034488.1-P | Field mustard | nucleus | 21.67 | 12.11 |
| CDY01140 | Canola | nucleus | 18.33 | 11.96 |
| CDY18747 | Canola | nucleus | 23.33 | 11.76 |
| AT1G11510.1 | Thale cress | nucleus | 22.78 | 11.65 |
| Os01t0249900-01 | Rice | plastid | 20.0 | 11.54 |
| Bra019847.1-P | Field mustard | nucleus | 22.78 | 11.52 |
| Bra032717.1-P | Field mustard | nucleus | 21.11 | 11.45 |
| Os03t0370250-01 | Rice | cytosol | 26.11 | 11.38 |
| AT1G44810.1 | Thale cress | nucleus | 17.78 | 10.81 |
| AT4G00390.1 | Thale cress | nucleus | 21.67 | 10.71 |
| AT1G66420.1 | Thale cress | nucleus | 16.67 | 10.64 |
| KRH57853 | Soybean | nucleus | 22.78 | 10.59 |
| VIT_00s0868g00010.t01 | Wine grape | nucleus | 25.56 | 10.53 |
| CDY61958 | Canola | nucleus | 21.11 | 10.47 |
| AT4G01260.1 | Thale cress | nucleus | 18.89 | 10.46 |
| CDY68087 | Canola | nucleus | 17.78 | 10.39 |
| AT4G00130.1 | Thale cress | mitochondrion | 11.11 | 10.31 |
| CDY49787 | Canola | nucleus | 21.11 | 10.24 |
| AT1G61730.1 | Thale cress | nucleus | 21.11 | 10.11 |
| Bra038583.1-P | Field mustard | nucleus | 22.78 | 9.79 |
| AT4G00610.1 | Thale cress | plastid | 17.78 | 9.76 |
| AT4G00250.1 | Thale cress | nucleus | 17.22 | 9.72 |
| KRH21647 | Soybean | nucleus | 23.89 | 9.6 |
| CDY07275 | Canola | nucleus | 18.89 | 9.5 |
| CDY52323 | Canola | nucleus | 8.89 | 9.47 |
| CDY26346 | Canola | nucleus | 21.67 | 9.47 |
| KRH10688 | Soybean | nucleus | 22.78 | 9.38 |
| AT4G25210.1 | Thale cress | nucleus | 18.33 | 8.97 |
| Bra027078.1-P | Field mustard | nucleus | 18.89 | 8.95 |
| VIT_12s0059g02690.t01 | Wine grape | nucleus | 21.67 | 8.94 |
| AT1G55950.1 | Thale cress | mitochondrion | 10.56 | 8.68 |
| AT4G00238.1 | Thale cress | nucleus | 16.11 | 8.41 |
| CDX89436 | Canola | nucleus | 15.0 | 7.67 |
| Bra013873.1-P | Field mustard | nucleus | 15.0 | 7.54 |
| CDX94469 | Canola | nucleus | 5.56 | 7.41 |
| CDY11061 | Canola | nucleus | 15.0 | 7.4 |
| CDX92682 | Canola | nucleus | 14.44 | 7.03 |
| Bra019183.1-P | Field mustard | nucleus | 13.89 | 6.83 |
| VIT_00s0999g00010.t01 | Wine grape | cytosol, nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os09t0451700-00 | EnsemblPlantsGene:Os09g0451700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF15 | PFAM:PF04504 |
| ProteinID:BAF25246.1 | ProteinID:BAT08389.1 | SEG:seg | UniParc:UPI0000DD975A | UniProt:Q0J1B9 | MapMan:15.5.28 |
Description
Protein of unknown function DUF573 family protein. (Os09t0451700-00)
Coordinates
chr9:+:16941755..16943398
Molecular Weight (calculated)
20096.2 Da
IEP (calculated)
7.538
GRAVY (calculated)
-0.962
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: AEQHSAAAAE DGTRSSPPNP TRTCSAEHSK RPSRVWSQAD ELVILRGLIT YRTKRGVLPG STQDIGKLHS YIRGQLSAKV STTQLSDKVR RLKQKYQMLA
101: TRAKTGKEVF PTPHDHNIYQ LAKKVWGTMS TAGEGGGSGY DNADAGESEE EQESEISASH YGKWQWDWDR CCECHCEREE
101: TRAKTGKEVF PTPHDHNIYQ LAKKVWGTMS TAGEGGGSGY DNADAGESEE EQESEISASH YGKWQWDWDR CCECHCEREE
001: MSRRFNPLED PPSASSSDEE GKEIARNSSS DDEDDVSSEN PSPLKTTLDA VSDSESGSDE ETDSDSELEK KKDQVVTNPV DVKRAKKVSG EEEKKKSGGG
101: GEETKKTYFQ RLWTEDDEIV VLQGLIDDKK DTGVSNTNKV YELVKKSISF DVSKNQLMEK LRALKKKYEN NLGKAKDGVE PTFVKPHDRK AFELSKLVWG
201: GIRMALASGM KSNEKSKKSS KFESVKHELD SSLPNSKNNC EDEVMDEGEV SFTKSSLVRS IVGLGMDELT AQQGLSKLAS KDMKRFYEQW KAMQAREFEF
301: FLQKHGFLFE VLSKISEAFG SNA
101: GEETKKTYFQ RLWTEDDEIV VLQGLIDDKK DTGVSNTNKV YELVKKSISF DVSKNQLMEK LRALKKKYEN NLGKAKDGVE PTFVKPHDRK AFELSKLVWG
201: GIRMALASGM KSNEKSKKSS KFESVKHELD SSLPNSKNNC EDEVMDEGEV SFTKSSLVRS IVGLGMDELT AQQGLSKLAS KDMKRFYEQW KAMQAREFEF
301: FLQKHGFLFE VLSKISEAFG SNA
Arabidopsis Description
Probable transcription factor At1g11510 [Source:UniProtKB/Swiss-Prot;Acc:C0SUU6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.