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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT4G00238.1 Thale cress nucleus 65.83 60.87
AT1G44810.1 Thale cress nucleus 38.56 41.55
CDY01140 Canola nucleus 31.66 36.59
CDY68087 Canola nucleus 31.97 33.12
Bra034488.1-P Field mustard nucleus 32.92 32.61
Bra032717.1-P Field mustard nucleus 32.92 31.63
AT1G61730.1 Thale cress nucleus 32.92 27.93
AT4G00390.1 Thale cress nucleus 31.66 27.75
CDY18747 Canola nucleus 30.09 26.89
AT1G66420.1 Thale cress nucleus 22.57 25.53
AT2G01370.1 Thale cress mitochondrion 19.75 25.0
AT4G00610.1 Thale cress plastid 25.71 25.0
AT4G00130.1 Thale cress mitochondrion 13.48 22.16
AT1G11510.1 Thale cress nucleus 22.88 20.74
AT1G55950.1 Thale cress mitochondrion 13.79 20.09
AT4G01260.1 Thale cress nucleus 19.75 19.38
AT4G25210.1 Thale cress nucleus 21.63 18.75
Os09t0451700-00 Rice nucleus 9.72 17.22
KRH10688 Soybean nucleus 23.2 16.93
KRH21647 Soybean nucleus 22.26 15.85
PGSC0003DMT400079215 Potato nucleus 18.81 15.04
KXG25358 Sorghum nucleus, plastid 18.18 13.33
KRH57853 Soybean nucleus 15.99 13.18
Zm00001d005865_P001 Maize nucleus 17.55 12.79
GSMUA_AchrUn_... Banana nucleus 15.67 12.14
EER96833 Sorghum nucleus 16.61 11.99
TraesCS5D01G241400.1 Wheat nucleus 17.55 11.43
AT5G28040.2 Thale cress nucleus 15.05 11.24
TraesCS5A01G234500.1 Wheat nucleus 17.24 11.22
AT3G04930.1 Thale cress nucleus 15.99 11.18
TraesCS5B01G233000.1 Wheat nucleus 16.93 11.04
Zm00001d020688_P001 Maize nucleus 14.42 10.75
Zm00001d049991_P001 Maize nucleus, plastid 15.36 10.75
HORVU5Hr1G067630.1 Barley nucleus 15.99 10.41
Os08t0467600-00 Rice nucleus 16.3 9.77
VIT_00s0999g00010.t01 Wine grape cytosol, nucleus 4.08 2.15
Protein Annotations
MapMan:15.5.28EntrezGene:828046ProteinID:AAB62832.1ProteinID:AAF02790.1ProteinID:AEE81846.1ArrayExpress:AT4G00250
EnsemblPlantsGene:AT4G00250RefSeq:AT4G00250TAIR:AT4G00250RefSeq:AT4G00250-TAIR-GEnsemblPlants:AT4G00250.1TAIR:AT4G00250.1
Unigene:At.34582EMBL:BT003961EMBL:BT005666ProteinID:CAB80783.1InterPro:GEBPGO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0010629GO:GO:0019725GO:GO:0044212
GO:GO:0071333RefSeq:NP_567161.1UniProt:O23077PFAM:PF04504PANTHER:PTHR31662PANTHER:PTHR31662:SF1
UniParc:UPI000000C207SEG:seg::::
Description
STKL2Transcription factor STKL2 [Source:UniProtKB/Swiss-Prot;Acc:O23077]
Coordinates
chr4:-:112705..113982
Molecular Weight (calculated)
35515.0 Da
IEP (calculated)
9.426
GRAVY (calculated)
-0.721
Length
319 amino acids
Sequence
(BLAST)
001: MAPLESPATA SSSEVESSSE EIFKSSSEES KPKDPVTVPS SKTLKSPSAA VNSKTDSSDD SEKQSFVLTR RKKKEGAAES PAVKSGKKRA GEGSTSRDMH
101: VKRVKKEDDN KKANPQRVWS EEDEISLLQA VIDFKAETGT SPWDHKNAFF DIAKKSISFD VSHVQFFDKI RRLKNKYFVN RKNKSGESNH DKKCLGLAVL
201: IWGSDGMNVE SPVKKDESIL VKGKANSKEK KVEKPLVIED EQVILGADSE WFEESFLVPV IANLGLDEYS VKKKWSKVSL ETKKKIQEKM KVVDAKKCEL
301: LLAEMDVLKD VTSVLAQTN
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.