Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032717.1-P | Field mustard | nucleus | 94.41 | 91.57 |
| CDY01140 | Canola | nucleus | 60.25 | 70.29 |
| AT1G44810.1 | Thale cress | nucleus | 35.4 | 38.51 |
| Bra031402.1-P | Field mustard | nucleus | 38.82 | 37.65 |
| Bra021317.1-P | Field mustard | nucleus | 33.23 | 34.74 |
| AT4G00250.1 | Thale cress | nucleus | 32.61 | 32.92 |
| Bra027078.1-P | Field mustard | nucleus | 37.58 | 31.84 |
| AT4G00238.1 | Thale cress | nucleus | 30.43 | 28.41 |
| Bra025445.1-P | Field mustard | nucleus | 25.47 | 26.71 |
| Bra019847.1-P | Field mustard | nucleus | 29.19 | 26.4 |
| AT4G00610.1 | Thale cress | plastid | 25.78 | 25.3 |
| Bra013873.1-P | Field mustard | nucleus | 24.53 | 22.07 |
| Bra019183.1-P | Field mustard | nucleus | 24.84 | 21.86 |
| Os09t0451700-00 | Rice | nucleus | 12.11 | 21.67 |
| PGSC0003DMT400079215 | Potato | nucleus | 21.74 | 17.54 |
| KRH10688 | Soybean | nucleus | 23.6 | 17.39 |
| KRH57853 | Soybean | nucleus | 20.81 | 17.31 |
| Bra038583.1-P | Field mustard | nucleus | 21.74 | 16.71 |
| KRH21647 | Soybean | nucleus | 20.19 | 14.51 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.7 | 13.84 |
| KXG25358 | Sorghum | nucleus, plastid | 18.32 | 13.56 |
| Bra009986.1-P | Field mustard | nucleus | 17.39 | 13.53 |
| Zm00001d049991_P001 | Maize | nucleus, plastid | 18.94 | 13.38 |
| Zm00001d005865_P001 | Maize | nucleus | 17.39 | 12.79 |
| Bra040416.1-P | Field mustard | nucleus | 16.46 | 12.47 |
| HORVU5Hr1G067630.1 | Barley | nucleus | 18.63 | 12.24 |
| Zm00001d020688_P001 | Maize | nucleus | 16.15 | 12.15 |
| TraesCS5A01G234500.1 | Wheat | nucleus | 18.32 | 12.04 |
| TraesCS5D01G241400.1 | Wheat | nucleus | 18.32 | 12.04 |
| TraesCS5B01G233000.1 | Wheat | nucleus | 18.01 | 11.86 |
| Bra040116.1-P | Field mustard | nucleus | 13.66 | 11.86 |
| EER96833 | Sorghum | nucleus | 15.84 | 11.54 |
| Os08t0467600-00 | Rice | nucleus | 16.77 | 10.15 |
| Bra036116.1-P | Field mustard | nucleus | 10.25 | 9.22 |
| VIT_00s0999g00010.t01 | Wine grape | cytosol, nucleus | 5.59 | 2.98 |
Protein Annotations
| EnsemblPlants:Bra034488.1 | EnsemblPlants:Bra034488.1-P | EnsemblPlantsGene:Bra034488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF1 |
| PFAM:PF04504 | SEG:seg | UniParc:UPI000253E56A | UniProt:M4F095 | MapMan:15.5.28 | : |
Description
AT1G61730 (E=3e-057) | DNA-binding storekeeper protein-related
Coordinates
chrScaffold000096:+:356960..357928
Molecular Weight (calculated)
35636.1 Da
IEP (calculated)
5.145
GRAVY (calculated)
-0.668
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKKKLTPLE DPPTASSTDD DQVEALSGDD EKEQISDDSS SDHLMNPVAI PPAKRSKSEK PIAVTKPKAV KKRPIETTSA SAKRARIAEE AKKPSSFQRL
101: WSEEDEVSLL QGMIDFKADS GKSPYEDMDR FYELASKSIS FEASKIQFVD KIRSLKRKYM GKAKHGAESL TKAHDIDCLK LATCIWGLPL DSSAKKLGKE
201: EEQVVAPESA NGDKVEEDRE VLVSGDNGGE DRRVLAGGEK DNEVLINGGG ADDWFEDSFL VGSIAGLGVS EQFVKQKWSM VTVETKKRME DKWKLLQAKE
301: MELVLHKTHF MREIGSVIAE AS
101: WSEEDEVSLL QGMIDFKADS GKSPYEDMDR FYELASKSIS FEASKIQFVD KIRSLKRKYM GKAKHGAESL TKAHDIDCLK LATCIWGLPL DSSAKKLGKE
201: EEQVVAPESA NGDKVEEDRE VLVSGDNGGE DRRVLAGGEK DNEVLINGGG ADDWFEDSFL VGSIAGLGVS EQFVKQKWSM VTVETKKRME DKWKLLQAKE
301: MELVLHKTHF MREIGSVIAE AS
001: MTKKLNPLED PPTATSSDED DVETSEAGEA SDDSSSSEED VPIKIRIKSP SATTAAAPPA KSTAVSTAAD SDSGSETETD SDSESTNPPN SGSGKTIALN
101: TVNLKKKEDP TSSSATLALP AMKSGTKRPA SEAAATTSTK RVKKDEESVK KPGGFQRLWS EEDEILVLQG MIDFKADTGK SPYVDTNAFY DFLKKSISFE
201: VSKNQFMDKI RSLRKKYIGK EGRNEPSFVK AHDKKAFELS KFIWGPKGIA LDSNVKSNGV SKKSVAKKKI DSVKQELVFA GGSSTNGKKV EEDGGDDGCD
301: WFDNSSLVRM IASLGVDEYY VKQQWSLVSV ESKKIVEEKY KLLQAKELEF VLEKTKFLNE VASMFVEASK NKPLDT
101: TVNLKKKEDP TSSSATLALP AMKSGTKRPA SEAAATTSTK RVKKDEESVK KPGGFQRLWS EEDEILVLQG MIDFKADTGK SPYVDTNAFY DFLKKSISFE
201: VSKNQFMDKI RSLRKKYIGK EGRNEPSFVK AHDKKAFELS KFIWGPKGIA LDSNVKSNGV SKKSVAKKKI DSVKQELVFA GGSSTNGKKV EEDGGDDGCD
301: WFDNSSLVRM IASLGVDEYY VKQQWSLVSV ESKKIVEEKY KLLQAKELEF VLEKTKFLNE VASMFVEASK NKPLDT
Arabidopsis Description
Probable transcription factor At1g61730 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.