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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT4G00250.1 Thale cress nucleus 41.55 38.56
CDY01140 Canola nucleus 35.47 38.04
CDY68087 Canola nucleus 39.53 37.99
AT4G00238.1 Thale cress nucleus 42.57 36.52
Bra034488.1-P Field mustard nucleus 38.51 35.4
Bra032717.1-P Field mustard nucleus 38.51 34.34
CDY18747 Canola nucleus 40.88 33.89
AT2G01370.1 Thale cress mitochondrion 28.04 32.94
AT4G00610.1 Thale cress plastid 33.11 29.88
AT1G61730.1 Thale cress nucleus 37.16 29.26
AT1G66420.1 Thale cress nucleus 25.0 26.24
AT4G00390.1 Thale cress nucleus 31.08 25.27
AT1G11510.1 Thale cress nucleus 28.38 23.86
AT1G55950.1 Thale cress mitochondrion 15.54 21.0
AT4G25210.1 Thale cress nucleus 24.66 19.84
AT4G01260.1 Thale cress nucleus 21.28 19.38
Os09t0451700-00 Rice nucleus 10.81 17.78
AT4G00130.1 Thale cress mitochondrion 10.81 16.49
KRH21647 Soybean nucleus 23.31 15.4
PGSC0003DMT400079215 Potato nucleus 20.61 15.29
KRH10688 Soybean nucleus 22.3 15.1
KRH57853 Soybean nucleus 18.58 14.21
AT5G28040.2 Thale cress nucleus 19.93 13.82
GSMUA_AchrUn_... Banana nucleus 17.91 12.86
Zm00001d020688_P001 Maize nucleus 16.89 11.68
AT3G04930.1 Thale cress nucleus 17.91 11.62
KXG25358 Sorghum nucleus, plastid 16.89 11.49
Zm00001d049991_P001 Maize nucleus, plastid 17.23 11.18
TraesCS5A01G234500.1 Wheat nucleus 18.24 11.02
TraesCS5D01G241400.1 Wheat nucleus 17.91 10.82
HORVU5Hr1G067630.1 Barley nucleus 17.57 10.61
Zm00001d005865_P001 Maize nucleus 15.54 10.5
EER96833 Sorghum nucleus 15.54 10.41
TraesCS5B01G233000.1 Wheat nucleus 16.22 9.82
Os08t0467600-00 Rice nucleus 17.23 9.59
VIT_00s0999g00010.t01 Wine grape cytosol, nucleus 6.42 3.15
Protein Annotations
MapMan:15.5.28EntrezGene:841045ProteinID:AAF78264.1ProteinID:AEE32054.1ArrayExpress:AT1G44810EnsemblPlantsGene:AT1G44810
RefSeq:AT1G44810TAIR:AT1G44810RefSeq:AT1G44810-TAIR-GEnsemblPlants:AT1G44810.1TAIR:AT1G44810.1EMBL:AY042861
EMBL:AY072504Unigene:At.14883InterPro:GEBPGO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0005515GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0043565RefSeq:NP_564491.1PFAM:PF04504
PO:PO:0000013PO:PO:0000037PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001054
PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022
PO:PO:0025281PANTHER:PTHR31662PANTHER:PTHR31662:SF1UniProt:Q9LPF0UniParc:UPI00000A7446SEG:seg
Description
Probable transcription factor At1g44810 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF0]
Coordinates
chr1:+:16923440..16924821
Molecular Weight (calculated)
32954.7 Da
IEP (calculated)
5.126
GRAVY (calculated)
-0.765
Length
296 amino acids
Sequence
(BLAST)
001: MNKKLLNPLE DPPTASSSED VDEEISSGED EKEHISNSSS SEEENELKDL STQTLNSPST EAPTLDSGSE TNSDSDKPIV LTSQKKKEGT DSSGTKRASE
101: GTSSKDIKRA KKVSGDDDNK KFQSLWTKED EISLLQGMID FKAETGTSAH DDMNGFFDIA KRYISFDVSK IQFGDKIRGL KKKYFGVRKK KGLDLDHDKK
201: CLGLAKSIWG LDGKEVVVLG GDSETSNWFE KSFLVRVVAR LGVDECIVKW KWSKVSKETK KRIEEKMKMV EAKELELLSQ KIDVLKEVAS VIAETI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.