Factsheet for Bra032717.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034488.1-P	Field mustard	nucleus	91.57	94.41
CDY01140	Canola	nucleus	60.24	72.46
AT1G44810.1	Thale cress	nucleus	34.34	38.51
Bra031402.1-P	Field mustard	nucleus	36.75	36.75
Bra021317.1-P	Field mustard	nucleus	31.93	34.42
AT4G00250.1	Thale cress	nucleus	31.63	32.92
Bra027078.1-P	Field mustard	nucleus	36.45	31.84
AT4G00238.1	Thale cress	nucleus	29.82	28.7
Bra025445.1-P	Field mustard	nucleus	24.7	26.71
Bra019847.1-P	Field mustard	nucleus	28.61	26.69
AT4G00610.1	Thale cress	plastid	25.3	25.61
Bra013873.1-P	Field mustard	nucleus	24.1	22.35
Bra019183.1-P	Field mustard	nucleus	24.4	22.13
Os09t0451700-00	Rice	nucleus	11.45	21.11
PGSC0003DMT400079215	Potato	nucleus	21.69	18.05
KRH57853	Soybean	nucleus	20.48	17.57
KRH10688	Soybean	nucleus	22.89	17.39
Bra038583.1-P	Field mustard	nucleus	21.08	16.71
KRH21647	Soybean	nucleus	19.58	14.51
KXG25358	Sorghum	nucleus, plastid	18.67	14.25
GSMUA_AchrUn_...	Banana	nucleus	17.47	14.08
Zm00001d049991_P001	Maize	nucleus, plastid	19.28	14.04
Bra009986.1-P	Field mustard	nucleus	17.47	14.01
Zm00001d005865_P001	Maize	nucleus	17.17	13.01
Bra040416.1-P	Field mustard	nucleus	15.96	12.47
HORVU5Hr1G067630.1	Barley	nucleus	18.07	12.24
TraesCS5B01G233000.1	Wheat	nucleus	17.77	12.07
TraesCS5A01G234500.1	Wheat	nucleus	17.77	12.04
TraesCS5D01G241400.1	Wheat	nucleus	17.77	12.04
Zm00001d020688_P001	Maize	nucleus	15.36	11.92
EER96833	Sorghum	nucleus	15.66	11.76
Bra040116.1-P	Field mustard	nucleus	12.95	11.59
Os08t0467600-00	Rice	nucleus	16.87	10.53
Bra036116.1-P	Field mustard	nucleus	9.94	9.22
VIT_00s0999g00010.t01	Wine grape	cytosol, nucleus	4.82	2.65

Protein Annotations

EnsemblPlants:Bra032717.1	EnsemblPlants:Bra032717.1-P	EnsemblPlantsGene:Bra032717	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:GEBP	PANTHER:PTHR31662	PANTHER:PTHR31662:SF1
PFAM:PF04504	SEG:seg	UniParc:UPI0002543DFF	UniProt:M4EV84	MapMan:15.5.28	:

Description

AT1G44810 (E=8e-037) | transcription regulator

Coordinates

chrA04:-:5236288..5237286

Molecular Weight (calculated)

36621.1 Da

IEP (calculated)

5.074

GRAVY (calculated)

-0.683

Length

332 amino acids

Sequence
(BLAST)

001: MTKKKLTPLE DPPTASSTDD DQVEALSGDD EKEQISDDSS PDDLTNPVAI PSAKRSKSEK PIAVTEPKAV KKRPIETTSV SAKRARTAEE AKKPSSFQRL
101: WSEEDEVSLL QGMIDFKADS GKSPYEDMDR FYELASKSIS FEASKIQFVD KIRSLKRKYM GKAKHGAESL TKAHDIDCLK LATCIWGLAL DSNSSAKKLG
201: KEEEEVVAPE SANGDKVEED REVLVSGDNG GEDRRVLAGG EKDKEVLING GGASKCHGVR ADDWFEDSFL VGSIAGLGVS EQFVKQKWSM VTVETKKRME
301: KKWKLLQAKE MELVLHKTDF MREIGSVIAE AS

Best Arabidopsis Sequence Match ( AT1G61730.1 )
(BLAST)

001: MTKKLNPLED PPTATSSDED DVETSEAGEA SDDSSSSEED VPIKIRIKSP SATTAAAPPA KSTAVSTAAD SDSGSETETD SDSESTNPPN SGSGKTIALN
101: TVNLKKKEDP TSSSATLALP AMKSGTKRPA SEAAATTSTK RVKKDEESVK KPGGFQRLWS EEDEILVLQG MIDFKADTGK SPYVDTNAFY DFLKKSISFE
201: VSKNQFMDKI RSLRKKYIGK EGRNEPSFVK AHDKKAFELS KFIWGPKGIA LDSNVKSNGV SKKSVAKKKI DSVKQELVFA GGSSTNGKKV EEDGGDDGCD
301: WFDNSSLVRM IASLGVDEYY VKQQWSLVSV ESKKIVEEKY KLLQAKELEF VLEKTKFLNE VASMFVEASK NKPLDT

Arabidopsis Description

Probable transcription factor At1g61730 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYA9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.