Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020688_P001 | Maize | nucleus | 57.69 | 59.58 |
| Os09t0451700-00 | Rice | nucleus | 17.42 | 42.78 |
| HORVU5Hr1G067630.1 | Barley | nucleus | 46.15 | 41.63 |
| TraesCS5B01G233000.1 | Wheat | nucleus | 45.25 | 40.9 |
| TraesCS5D01G241400.1 | Wheat | nucleus | 45.25 | 40.82 |
| TraesCS5A01G234500.1 | Wheat | nucleus | 43.21 | 38.98 |
| KXG25358 | Sorghum | nucleus, plastid | 32.81 | 33.33 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.76 | 25.49 |
| CDX94469 | Canola | nucleus | 6.79 | 22.22 |
| EER97613 | Sorghum | nucleus | 17.42 | 20.53 |
| PGSC0003DMT400079215 | Potato | nucleus | 18.33 | 20.3 |
| CDY12911 | Canola | nucleus | 8.6 | 19.69 |
| AT4G00390.1 | Thale cress | nucleus | 16.06 | 19.51 |
| CDY32382 | Canola | nucleus | 12.22 | 19.15 |
| CDY07275 | Canola | nucleus | 15.16 | 18.72 |
| EES02686 | Sorghum | nucleus | 16.97 | 18.56 |
| EES02423 | Sorghum | nucleus | 16.97 | 18.47 |
| Bra021317.1-P | Field mustard | nucleus | 12.67 | 18.18 |
| Bra027078.1-P | Field mustard | nucleus | 15.38 | 17.89 |
| KRH10688 | Soybean | nucleus | 17.65 | 17.85 |
| AT1G61730.1 | Thale cress | nucleus | 15.16 | 17.82 |
| KRH21647 | Soybean | nucleus | 17.87 | 17.63 |
| EER92218 | Sorghum | nucleus | 14.93 | 17.51 |
| CDY61958 | Canola | nucleus | 14.25 | 17.36 |
| AT4G00130.1 | Thale cress | mitochondrion | 7.47 | 17.01 |
| Bra031402.1-P | Field mustard | nucleus | 12.67 | 16.87 |
| KRH57853 | Soybean | nucleus | 14.71 | 16.8 |
| AT1G66420.1 | Thale cress | nucleus | 10.63 | 16.67 |
| AT4G00250.1 | Thale cress | nucleus | 11.99 | 16.61 |
| CDY18747 | Canola | nucleus | 13.35 | 16.53 |
| CDX89436 | Canola | nucleus | 13.12 | 16.48 |
| AT4G25210.1 | Thale cress | nucleus | 13.57 | 16.3 |
| VIT_12s0059g02690.t01 | Wine grape | nucleus | 16.06 | 16.28 |
| CDX99698 | Canola | nucleus | 11.31 | 16.23 |
| CDX92682 | Canola | nucleus | 13.57 | 16.22 |
| CDY11061 | Canola | nucleus | 13.35 | 16.16 |
| CDX97966 | Canola | nucleus | 11.99 | 16.16 |
| AT4G00238.1 | Thale cress | nucleus | 12.44 | 15.94 |
| CDY68087 | Canola | nucleus | 11.09 | 15.91 |
| Bra019183.1-P | Field mustard | nucleus | 13.12 | 15.85 |
| Bra034488.1-P | Field mustard | nucleus | 11.54 | 15.84 |
| AT4G01260.1 | Thale cress | nucleus | 11.54 | 15.69 |
| Bra032717.1-P | Field mustard | nucleus | 11.76 | 15.66 |
| Bra025445.1-P | Field mustard | nucleus | 10.86 | 15.64 |
| CDY01140 | Canola | nucleus | 9.73 | 15.58 |
| AT1G44810.1 | Thale cress | nucleus | 10.41 | 15.54 |
| AT2G01370.1 | Thale cress | mitochondrion | 8.82 | 15.48 |
| Bra013873.1-P | Field mustard | nucleus | 12.44 | 15.36 |
| Bra038583.1-P | Field mustard | nucleus | 14.48 | 15.27 |
| VIT_00s0868g00010.t01 | Wine grape | nucleus | 14.93 | 15.1 |
| AT4G00610.1 | Thale cress | plastid | 11.09 | 14.94 |
| Bra019847.1-P | Field mustard | nucleus | 11.99 | 14.89 |
| CDY27657 | Canola | nucleus | 10.18 | 14.8 |
| CDY49787 | Canola | nucleus | 12.22 | 14.56 |
| AT1G11510.1 | Thale cress | nucleus | 10.86 | 13.64 |
| CDY26346 | Canola | nucleus | 12.44 | 13.35 |
| CDY52323 | Canola | nucleus | 4.98 | 13.02 |
| AT1G55950.1 | Thale cress | mitochondrion | 6.11 | 12.33 |
| VIT_00s0999g00010.t01 | Wine grape | cytosol, nucleus | 2.49 | 1.82 |
Protein Annotations
| EnsemblPlants:EER96833 | EnsemblPlantsGene:SORBI_3002G222300 | EntrezGene:8081034 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF15 |
| PFAM:PF04504 | ProteinID:EER96833 | ProteinID:EER96833.1 | RefSeq:XP_002460312.1 | SEG:seg | unigene:Sbi.19785 |
| UniParc:UPI0001A835A5 | UniProt:C5X278 | MapMan:15.5.28 | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:61395803..61397690
Molecular Weight (calculated)
47479.2 Da
IEP (calculated)
9.734
GRAVY (calculated)
-0.889
Length
442 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPKRPAAVA ASGSASEASD AEADAAHHQP SSPSPSKTPP PNPNPKSAAA GPTSAAEDST AAGSDSEAAY DSDADHRPAP RKAAAAAASS PSRKPRSPRP
101: RSRSRSPDAA SYSDVAASDA DPTAGDSADD DNASPLALRP PRPSRAEAAA IKPLSSRPMD PPRRSMVPSF SEPRPKRPRS AAVPSSVEQL KRPSRLWSLR
201: DEIVILRGLA TYRAKRGVLP GSMYDISKLH GHIQSELSVK VTPTQLSDKV RRLKQKYNLL SSRGKNGRDP DLPTQHEQSV YEIGKKVWGT TANGGGSTGG
301: DGYEIGGGGD DSEEDHEIAE SDDDVESGRD ERPRKNRRVM PIAMANGNGA GFGAMNANSR GKFDIEKGKD AYPYLWETVE DLSKEHPNGV AFKKAFELIE
401: GPKARGMEEK LRKFRLTEIR HQLRRMELMK ETVKMVLDAL EG
101: RSRSRSPDAA SYSDVAASDA DPTAGDSADD DNASPLALRP PRPSRAEAAA IKPLSSRPMD PPRRSMVPSF SEPRPKRPRS AAVPSSVEQL KRPSRLWSLR
201: DEIVILRGLA TYRAKRGVLP GSMYDISKLH GHIQSELSVK VTPTQLSDKV RRLKQKYNLL SSRGKNGRDP DLPTQHEQSV YEIGKKVWGT TANGGGSTGG
301: DGYEIGGGGD DSEEDHEIAE SDDDVESGRD ERPRKNRRVM PIAMANGNGA GFGAMNANSR GKFDIEKGKD AYPYLWETVE DLSKEHPNGV AFKKAFELIE
401: GPKARGMEEK LRKFRLTEIR HQLRRMELMK ETVKMVLDAL EG
001: MTKKLNPLED PPTATSSDED DVETSEAGEA SDDSSSSEED VPIKIRIKSP SATTAAAPPA KSTAVSTAAD SDSGSETETD SDSESTNPPN SGSGKTIALN
101: TVNLKKKEDP TSSSATLALP AMKSGTKRPA SEAAATTSTK RVKKDEESVK KPGGFQRLWS EEDEILVLQG MIDFKADTGK SPYVDTNAFY DFLKKSISFE
201: VSKNQFMDKI RSLRKKYIGK EGRNEPSFVK AHDKKAFELS KFIWGPKGIA LDSNVKSNGV SKKSVAKKKI DSVKQELVFA GGSSTNGKKV EEDGGDDGCD
301: WFDNSSLVRM IASLGVDEYY VKQQWSLVSV ESKKIVEEKY KLLQAKELEF VLEKTKFLNE VASMFVEASK NKPLDT
101: TVNLKKKEDP TSSSATLALP AMKSGTKRPA SEAAATTSTK RVKKDEESVK KPGGFQRLWS EEDEILVLQG MIDFKADTGK SPYVDTNAFY DFLKKSISFE
201: VSKNQFMDKI RSLRKKYIGK EGRNEPSFVK AHDKKAFELS KFIWGPKGIA LDSNVKSNGV SKKSVAKKKI DSVKQELVFA GGSSTNGKKV EEDGGDDGCD
301: WFDNSSLVRM IASLGVDEYY VKQQWSLVSV ESKKIVEEKY KLLQAKELEF VLEKTKFLNE VASMFVEASK NKPLDT
Arabidopsis Description
Probable transcription factor At1g61730 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.