Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52323 | Canola | nucleus | 38.25 | 75.15 |
| Bra021317.1-P | Field mustard | nucleus | 57.53 | 62.01 |
| Bra027078.1-P | Field mustard | nucleus | 58.43 | 51.05 |
| AT1G61730.1 | Thale cress | nucleus | 47.59 | 42.02 |
| Bra034488.1-P | Field mustard | nucleus | 37.65 | 38.82 |
| Bra032717.1-P | Field mustard | nucleus | 36.75 | 36.75 |
| AT4G00390.1 | Thale cress | nucleus | 37.95 | 34.62 |
| Bra025445.1-P | Field mustard | nucleus | 29.52 | 31.92 |
| Bra019847.1-P | Field mustard | nucleus | 34.04 | 31.74 |
| Bra013873.1-P | Field mustard | nucleus | 27.11 | 25.14 |
| Bra019183.1-P | Field mustard | nucleus | 27.11 | 24.59 |
| Os09t0451700-00 | Rice | nucleus | 12.35 | 22.78 |
| KRH10688 | Soybean | nucleus | 28.92 | 21.97 |
| KRH21647 | Soybean | nucleus | 29.52 | 21.88 |
| Bra038583.1-P | Field mustard | nucleus | 25.6 | 20.29 |
| PGSC0003DMT400079215 | Potato | nucleus | 22.29 | 18.55 |
| KRH57853 | Soybean | nucleus | 21.39 | 18.35 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.69 | 17.48 |
| Bra009986.1-P | Field mustard | nucleus | 19.28 | 15.46 |
| Bra040416.1-P | Field mustard | nucleus | 18.67 | 14.59 |
| Zm00001d005865_P001 | Maize | nucleus | 17.17 | 13.01 |
| KXG25358 | Sorghum | nucleus, plastid | 16.87 | 12.87 |
| HORVU5Hr1G067630.1 | Barley | nucleus | 18.98 | 12.86 |
| Zm00001d020688_P001 | Maize | nucleus | 16.57 | 12.85 |
| EER96833 | Sorghum | nucleus | 16.87 | 12.67 |
| Zm00001d049991_P001 | Maize | nucleus, plastid | 17.17 | 12.5 |
| TraesCS5B01G233000.1 | Wheat | nucleus | 18.37 | 12.47 |
| TraesCS5A01G234500.1 | Wheat | nucleus | 18.07 | 12.24 |
| TraesCS5D01G241400.1 | Wheat | nucleus | 18.07 | 12.24 |
| Bra040116.1-P | Field mustard | nucleus | 13.25 | 11.86 |
| Os08t0467600-00 | Rice | nucleus | 15.96 | 9.96 |
| Bra036116.1-P | Field mustard | nucleus | 10.54 | 9.78 |
| VIT_00s0999g00010.t01 | Wine grape | cytosol, nucleus | 7.53 | 4.14 |
Protein Annotations
| EnsemblPlants:Bra031402.1 | EnsemblPlants:Bra031402.1-P | EnsemblPlantsGene:Bra031402 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | ncoils:Coil | PANTHER:PTHR31662 |
| PANTHER:PTHR31662:SF1 | PFAM:PF04504 | SEG:seg | UniParc:UPI0002545201 | UniProt:M4ERH7 | MapMan:15.5.28 |
Description
AT4G00390 (E=4e-054) | transcription regulator
Coordinates
chrA01:-:17755753..17756751
Molecular Weight (calculated)
36942.6 Da
IEP (calculated)
4.811
GRAVY (calculated)
-1.055
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKKRNPLEN PPAASSSDDD DDEADSSAGE EEEEVNDSSS EEEEEEDQPN PPSSSAVTIA IPGKTTSASD SVSGSETETD SESDTKKDKS PPPATKSGTK
101: RPSEGTSKEA NSKRAKIGED SKKPAAFQRL WTEDDEIAVL QGMIDFKKDT GNSPYDDTNA YYDYIKKSIS FEVSKNQFMD KLRSLKKKYM GKEKPSFTKP
201: HDQKSYRLCK SIWGPEGMVL ESNGKKTKKV GSVKQQELSF ASSPNGKTVD DGGDMYDWFE KSFLVRGIAG FGVDESYVKQ RWRLVPVETK RKVEEKVKML
301: QAKEIEFVLQ KTEILHEVTS LIAEASKNKP LE
101: RPSEGTSKEA NSKRAKIGED SKKPAAFQRL WTEDDEIAVL QGMIDFKKDT GNSPYDDTNA YYDYIKKSIS FEVSKNQFMD KLRSLKKKYM GKEKPSFTKP
201: HDQKSYRLCK SIWGPEGMVL ESNGKKTKKV GSVKQQELSF ASSPNGKTVD DGGDMYDWFE KSFLVRGIAG FGVDESYVKQ RWRLVPVETK RKVEEKVKML
301: QAKEIEFVLQ KTEILHEVTS LIAEASKNKP LE
001: MTKKLNPLED PPTATSSDED DVETSEAGEA SDDSSSSEED VPIKIRIKSP SATTAAAPPA KSTAVSTAAD SDSGSETETD SDSESTNPPN SGSGKTIALN
101: TVNLKKKEDP TSSSATLALP AMKSGTKRPA SEAAATTSTK RVKKDEESVK KPGGFQRLWS EEDEILVLQG MIDFKADTGK SPYVDTNAFY DFLKKSISFE
201: VSKNQFMDKI RSLRKKYIGK EGRNEPSFVK AHDKKAFELS KFIWGPKGIA LDSNVKSNGV SKKSVAKKKI DSVKQELVFA GGSSTNGKKV EEDGGDDGCD
301: WFDNSSLVRM IASLGVDEYY VKQQWSLVSV ESKKIVEEKY KLLQAKELEF VLEKTKFLNE VASMFVEASK NKPLDT
101: TVNLKKKEDP TSSSATLALP AMKSGTKRPA SEAAATTSTK RVKKDEESVK KPGGFQRLWS EEDEILVLQG MIDFKADTGK SPYVDTNAFY DFLKKSISFE
201: VSKNQFMDKI RSLRKKYIGK EGRNEPSFVK AHDKKAFELS KFIWGPKGIA LDSNVKSNGV SKKSVAKKKI DSVKQELVFA GGSSTNGKKV EEDGGDDGCD
301: WFDNSSLVRM IASLGVDEYY VKQQWSLVSV ESKKIVEEKY KLLQAKELEF VLEKTKFLNE VASMFVEASK NKPLDT
Arabidopsis Description
Probable transcription factor At1g61730 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.