Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12911 | Canola | nucleus | 43.68 | 86.01 |
| CDY61958 | Canola | nucleus | 78.68 | 82.37 |
| Bra021317.1-P | Field mustard | nucleus | 50.79 | 62.66 |
| Bra031402.1-P | Field mustard | nucleus | 51.05 | 58.43 |
| AT1G61730.1 | Thale cress | nucleus | 49.21 | 49.73 |
| Bra034488.1-P | Field mustard | nucleus | 31.84 | 37.58 |
| AT4G00390.1 | Thale cress | nucleus | 35.53 | 37.09 |
| Bra019847.1-P | Field mustard | nucleus | 34.74 | 37.08 |
| Bra032717.1-P | Field mustard | nucleus | 31.84 | 36.45 |
| Bra025445.1-P | Field mustard | nucleus | 26.84 | 33.22 |
| Bra019183.1-P | Field mustard | nucleus | 25.26 | 26.23 |
| Bra013873.1-P | Field mustard | nucleus | 23.95 | 25.42 |
| KRH10688 | Soybean | nucleus | 26.32 | 22.88 |
| KRH21647 | Soybean | nucleus | 25.79 | 21.88 |
| KRH57853 | Soybean | nucleus | 20.0 | 19.64 |
| Bra038583.1-P | Field mustard | nucleus | 21.58 | 19.57 |
| PGSC0003DMT400079215 | Potato | nucleus | 20.0 | 19.05 |
| Os09t0451700-00 | Rice | nucleus | 8.95 | 18.89 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.63 | 16.26 |
| Bra009986.1-P | Field mustard | nucleus | 16.84 | 15.46 |
| EER96833 | Sorghum | nucleus | 17.89 | 15.38 |
| Zm00001d020688_P001 | Maize | nucleus | 17.11 | 15.19 |
| Zm00001d005865_P001 | Maize | nucleus | 17.37 | 15.07 |
| Bra040416.1-P | Field mustard | nucleus | 16.58 | 14.82 |
| TraesCS5B01G233000.1 | Wheat | nucleus | 18.16 | 14.11 |
| TraesCS5A01G234500.1 | Wheat | nucleus | 18.16 | 14.08 |
| TraesCS5D01G241400.1 | Wheat | nucleus | 18.16 | 14.08 |
| HORVU5Hr1G067630.1 | Barley | nucleus | 17.89 | 13.88 |
| KXG25358 | Sorghum | nucleus, plastid | 15.26 | 13.33 |
| Bra040116.1-P | Field mustard | nucleus | 12.89 | 13.21 |
| Bra036116.1-P | Field mustard | nucleus | 12.11 | 12.85 |
| Zm00001d049991_P001 | Maize | nucleus, plastid | 15.26 | 12.72 |
| Os08t0467600-00 | Rice | nucleus | 16.58 | 11.84 |
| VIT_00s0999g00010.t01 | Wine grape | cytosol, nucleus | 7.37 | 4.64 |
Protein Annotations
| EnsemblPlants:Bra027078.1 | EnsemblPlants:Bra027078.1-P | EnsemblPlantsGene:Bra027078 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF1 |
| PFAM:PF04504 | SEG:seg | UniParc:UPI00025425E0 | UniProt:M4EE67 | MapMan:15.5.28 | : |
Description
AT1G61730 (E=5e-068) | DNA-binding storekeeper protein-related
Coordinates
chrA09:+:8253097..8254239
Molecular Weight (calculated)
42110.8 Da
IEP (calculated)
4.878
GRAVY (calculated)
-1.017
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKKRNPLED PPAASSSDEE EVESSAEEEE EEDDNSSSEE EDDDPKPPPP SSSAVTIAVP GKPTASLPAA DSESGSETET DSESEPEQPT NKGSGKAILT
101: AKKSNDAPPP PPVALALPAK SGSKRPSTEG SSKETNSKRV KKDEEKREDS KKPAAFQRLW TEEDEIAVLQ GMIDFKNDTG KSPYDDTNVY YDYIKKSISF
201: EVSKNQFMDK IRSLRKKYIG KEKPSFTKPH DQKSYRLCQY IWGPDGMGLE SAVKSNGASK KSQKKTKKLD SVKQELSFGA SPNGKTVDDD ENDVEVAVAA
301: KKHDWFENSF LVKGIAGFGV DEHYVKQRWS LVPVETKKKV EEKLKLLQAK EIEFVLQKTE VLHEVTTMIA EAYKNKPLDI
101: AKKSNDAPPP PPVALALPAK SGSKRPSTEG SSKETNSKRV KKDEEKREDS KKPAAFQRLW TEEDEIAVLQ GMIDFKNDTG KSPYDDTNVY YDYIKKSISF
201: EVSKNQFMDK IRSLRKKYIG KEKPSFTKPH DQKSYRLCQY IWGPDGMGLE SAVKSNGASK KSQKKTKKLD SVKQELSFGA SPNGKTVDDD ENDVEVAVAA
301: KKHDWFENSF LVKGIAGFGV DEHYVKQRWS LVPVETKKKV EEKLKLLQAK EIEFVLQKTE VLHEVTTMIA EAYKNKPLDI
001: MTKKLNPLED PPTATSSDED DVETSEAGEA SDDSSSSEED VPIKIRIKSP SATTAAAPPA KSTAVSTAAD SDSGSETETD SDSESTNPPN SGSGKTIALN
101: TVNLKKKEDP TSSSATLALP AMKSGTKRPA SEAAATTSTK RVKKDEESVK KPGGFQRLWS EEDEILVLQG MIDFKADTGK SPYVDTNAFY DFLKKSISFE
201: VSKNQFMDKI RSLRKKYIGK EGRNEPSFVK AHDKKAFELS KFIWGPKGIA LDSNVKSNGV SKKSVAKKKI DSVKQELVFA GGSSTNGKKV EEDGGDDGCD
301: WFDNSSLVRM IASLGVDEYY VKQQWSLVSV ESKKIVEEKY KLLQAKELEF VLEKTKFLNE VASMFVEASK NKPLDT
101: TVNLKKKEDP TSSSATLALP AMKSGTKRPA SEAAATTSTK RVKKDEESVK KPGGFQRLWS EEDEILVLQG MIDFKADTGK SPYVDTNAFY DFLKKSISFE
201: VSKNQFMDKI RSLRKKYIGK EGRNEPSFVK AHDKKAFELS KFIWGPKGIA LDSNVKSNGV SKKSVAKKKI DSVKQELVFA GGSSTNGKKV EEDGGDDGCD
301: WFDNSSLVRM IASLGVDEYY VKQQWSLVSV ESKKIVEEKY KLLQAKELEF VLEKTKFLNE VASMFVEASK NKPLDT
Arabidopsis Description
Probable transcription factor At1g61730 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.