Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 20.64 | 21.84 |
| Os09t0451700-00 | Rice | nucleus | 8.94 | 21.67 |
| VIT_00s0868g00010.t01 | Wine grape | nucleus | 19.04 | 18.99 |
| Zm00001d020688_P001 | Maize | nucleus | 16.97 | 17.29 |
| VIT_14s0030g01600.t01 | Wine grape | cytosol, mitochondrion | 2.29 | 16.13 |
| EER96833 | Sorghum | nucleus | 16.28 | 16.06 |
| Zm00001d005865_P001 | Maize | nucleus | 15.14 | 15.07 |
| TraesCS5D01G241400.1 | Wheat | nucleus | 16.74 | 14.9 |
| TraesCS5A01G234500.1 | Wheat | nucleus | 16.51 | 14.69 |
| TraesCS5B01G233000.1 | Wheat | nucleus | 16.05 | 14.31 |
| HORVU5Hr1G067630.1 | Barley | nucleus | 15.83 | 14.08 |
| Zm00001d049991_P001 | Maize | nucleus, plastid | 14.45 | 13.82 |
| KXG25358 | Sorghum | nucleus, plastid | 13.53 | 13.56 |
| Os08t0467600-00 | Rice | nucleus | 14.45 | 11.84 |
| VIT_00s0999g00010.t01 | Wine grape | cytosol, nucleus | 5.28 | 3.81 |
Protein Annotations
| EntrezGene:104880887 | MapMan:15.5.28 | ProteinID:CCB52070 | ProteinID:CCB52070.1 | UniProt:F6HIM4 | EMBL:FN595765 |
| InterPro:GEBP | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | PFAM:PF04504 | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF1 | UniParc:UPI0001984601 | ArrayExpress:VIT_12s0059g02690 |
| EnsemblPlantsGene:VIT_12s0059g02690 | EnsemblPlants:VIT_12s0059g02690.t01 | RefSeq:XP_010657338.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr12:+:7416720..7418195
Molecular Weight (calculated)
48394.1 Da
IEP (calculated)
5.401
GRAVY (calculated)
-1.033
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLKYNPLLV PPPVSSSDEE PSDSENDVSD RENDVADSEN DVVDSDSDND VSEAESEEND VDSGDDDVVV VEDSEDEQPI GLLKKSKAGA SASKTPTAGA
101: SSSKAPTAGA SSSKPAAEPG SESNSDGGSD EVRSVSSPDS DGFTVRQIVL KREKQVVAGT ARRLSGKKPA RSGPSGSEAE KKRKRKKVDG GDGAERSEKK
201: EVDSGEGAVK SEKRALFQRL WSEEDEIALL QGLGEYERQK GTDPFYEMDG FFEFIKGSIH IRVTQTQLVN KARRMRRKFV RNAMRGKDGK DPSFKRPHDR
301: RAYEVSKTIW GDGKMKIRPK RRGRPFGTSN RVASRKREMI KKEDAPQNTQ EEKGGEDFWA RYPCLRDSID SFPSLPEWGK KLMMEKLIET PEEKLNELEG
401: RWKELGRAVC ELHLSHLQLI KDQAKVVHET MTSDSQ
101: SSSKAPTAGA SSSKPAAEPG SESNSDGGSD EVRSVSSPDS DGFTVRQIVL KREKQVVAGT ARRLSGKKPA RSGPSGSEAE KKRKRKKVDG GDGAERSEKK
201: EVDSGEGAVK SEKRALFQRL WSEEDEIALL QGLGEYERQK GTDPFYEMDG FFEFIKGSIH IRVTQTQLVN KARRMRRKFV RNAMRGKDGK DPSFKRPHDR
301: RAYEVSKTIW GDGKMKIRPK RRGRPFGTSN RVASRKREMI KKEDAPQNTQ EEKGGEDFWA RYPCLRDSID SFPSLPEWGK KLMMEKLIET PEEKLNELEG
401: RWKELGRAVC ELHLSHLQLI KDQAKVVHET MTSDSQ
001: MTKKLDPPTA PSSDEDDVET SEDDSSSSEE DEPIKSLPAT TAAAPAKSTA VSAATPAKST SVSAAAPSKS TAVSAAADSD SGSESETDSD SESTDPPKSG
101: SGKTIASKKK DDPSSSTATL ALPAVKSGAK RAASEAATTS TKRVKKDEES VKKPALFQRL WSDDDEISML QGMIDYHADT GKSPSADTNA FYEFQKKSIS
201: FEVSKSQFSD KVRSLRKKYR AKEGKDEPRF VKAHDKKAFE LSKFIWGPKG IALDSNAKSN GVSKKSASKT KEKLDSVKQD LAFVGVSSTN GDDWFEKSSL
301: ARMIAGSGID EYYVRQKWSS FTLETKKIVE EKFQLMQAKE LEAMLDKSVR LTDLTSYFVD ASKN
101: SGKTIASKKK DDPSSSTATL ALPAVKSGAK RAASEAATTS TKRVKKDEES VKKPALFQRL WSDDDEISML QGMIDYHADT GKSPSADTNA FYEFQKKSIS
201: FEVSKSQFSD KVRSLRKKYR AKEGKDEPRF VKAHDKKAFE LSKFIWGPKG IALDSNAKSN GVSKKSASKT KEKLDSVKQD LAFVGVSSTN GDDWFEKSSL
301: ARMIAGSGID EYYVRQKWSS FTLETKKIVE EKFQLMQAKE LEAMLDKSVR LTDLTSYFVD ASKN
Arabidopsis Description
Probable transcription factor At4g00390 [Source:UniProtKB/Swiss-Prot;Acc:O23063]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.