Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92682 | Canola | nucleus | 58.52 | 21.35 |
| CDX89436 | Canola | nucleus | 55.56 | 21.31 |
| CDY11061 | Canola | nucleus | 53.33 | 19.73 |
| AT4G00130.1 | Thale cress | mitochondrion | 23.7 | 16.49 |
| AT4G25210.1 | Thale cress | nucleus | 39.26 | 14.4 |
| CDY68087 | Canola | nucleus | 24.44 | 10.71 |
| CDY12911 | Canola | nucleus | 14.81 | 10.36 |
| CDY01140 | Canola | nucleus | 19.26 | 9.42 |
| CDY32382 | Canola | nucleus | 18.52 | 8.87 |
| CDX99698 | Canola | nucleus | 20.0 | 8.77 |
| CDY27657 | Canola | nucleus | 19.26 | 8.55 |
| CDY61958 | Canola | nucleus | 21.48 | 7.99 |
| CDY18747 | Canola | nucleus | 20.74 | 7.84 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.7 | 7.77 |
| KRH21647 | Soybean | nucleus | 25.19 | 7.59 |
| KRH10688 | Soybean | nucleus | 24.44 | 7.55 |
| CDY07275 | Canola | nucleus | 19.26 | 7.26 |
| CDY52323 | Canola | nucleus | 8.89 | 7.1 |
| KRH57853 | Soybean | nucleus | 20.0 | 6.98 |
| EER96833 | Sorghum | nucleus | 22.22 | 6.79 |
| Zm00001d020688_P001 | Maize | nucleus | 21.48 | 6.78 |
| Zm00001d005865_P001 | Maize | nucleus | 21.48 | 6.62 |
| PGSC0003DMT400079215 | Potato | nucleus | 17.78 | 6.02 |
| CDY49787 | Canola | nucleus | 16.3 | 5.93 |
| CDX97966 | Canola | nucleus | 14.07 | 5.79 |
| KXG25358 | Sorghum | nucleus, plastid | 18.52 | 5.75 |
| Os09t0451700-00 | Rice | nucleus | 7.41 | 5.56 |
| TraesCS5B01G233000.1 | Wheat | nucleus | 18.52 | 5.11 |
| HORVU5Hr1G067630.1 | Barley | nucleus | 18.52 | 5.1 |
| CDX80681 | Canola | nucleus | 14.81 | 4.87 |
| Zm00001d049991_P001 | Maize | nucleus, plastid | 16.3 | 4.82 |
| CDY00009 | Canola | nucleus | 14.07 | 4.82 |
| CDY21105 | Canola | nucleus | 12.59 | 4.78 |
| CDY68986 | Canola | nucleus | 11.85 | 4.72 |
| Os08t0467600-00 | Rice | nucleus | 18.52 | 4.7 |
| TraesCS5A01G234500.1 | Wheat | nucleus | 17.04 | 4.69 |
| TraesCS5D01G241400.1 | Wheat | nucleus | 17.04 | 4.69 |
| CDY50767 | Canola | nucleus | 14.07 | 4.69 |
| CDY41910 | Canola | nucleus | 13.33 | 4.24 |
| CDY30023 | Canola | nucleus | 12.59 | 4.22 |
| CDY26346 | Canola | nucleus | 11.85 | 3.88 |
| CDX86188 | Canola | cytosol | 16.3 | 3.65 |
| VIT_00s0999g00010.t01 | Wine grape | cytosol, nucleus | 5.93 | 1.32 |
Protein Annotations
| EnsemblPlants:CDX94469 | EnsemblPlantsGene:GSBRNA2T00157645001 | ProteinID:CDX94469 | ProteinID:CDX94469.1 | SEG:seg | UniParc:UPI0004EE2CDA |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC01g17150D
Coordinates
chrLK031881:-:1429855..1431149
Molecular Weight (calculated)
14654.0 Da
IEP (calculated)
4.310
GRAVY (calculated)
-0.658
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPKDKIENP PAASSSEEEE ESGSSVEASG SSSDDEAGDK EVEKRKGSVV VDAHLSSSRE MALFFKAENV SVFGLDESTV SAVWDMVEDG PKKREMDEKL
101: KKLKDMQVEL CLQRTALLDT TAKMIFKDNA SSSSS
101: KKLKDMQVEL CLQRTALLDT TAKMIFKDNA SSSSS
001: MAPKQPEKIE NPPMASAPSS EKESGSTENE YGSSGEETNS SDDEHEEARD NVISTPLSFG QELVSFFKVE NLTYLGIDEA KWIAYWDMVK DGPKKREVEK
101: QLKKMLAMQM ELFMMRTGFT KEVATVLFKQ DNASSSGK
101: QLKKMLAMQM ELFMMRTGFT KEVATVLFKQ DNASSSGK
Arabidopsis Description
Mediator-associated-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FMY2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.