Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019183.1-P | Field mustard | nucleus | 84.66 | 84.43 |
| CDX92682 | Canola | nucleus | 74.52 | 73.51 |
| CDX89436 | Canola | nucleus | 61.64 | 63.92 |
| CDX94469 | Canola | nucleus | 19.73 | 53.33 |
| AT4G25210.1 | Thale cress | nucleus | 44.93 | 44.57 |
| AT4G00130.1 | Thale cress | mitochondrion | 20.0 | 37.63 |
| CDY52323 | Canola | nucleus | 14.25 | 30.77 |
| CDY32382 | Canola | nucleus | 21.64 | 28.01 |
| CDY68087 | Canola | nucleus | 23.29 | 27.6 |
| CDY27657 | Canola | nucleus | 22.74 | 27.3 |
| CDY01140 | Canola | nucleus | 20.55 | 27.17 |
| CDY07275 | Canola | nucleus | 25.48 | 25.98 |
| CDY61958 | Canola | nucleus | 25.48 | 25.62 |
| CDY12911 | Canola | nucleus | 13.42 | 25.39 |
| CDY18747 | Canola | nucleus | 23.56 | 24.09 |
| CDX97966 | Canola | nucleus | 20.0 | 22.26 |
| KRH10688 | Soybean | nucleus | 26.3 | 21.97 |
| KRH57853 | Soybean | nucleus | 22.74 | 21.45 |
| CDX99698 | Canola | nucleus | 17.53 | 20.78 |
| CDY49787 | Canola | nucleus | 20.82 | 20.49 |
| KRH21647 | Soybean | nucleus | 24.38 | 19.87 |
| PGSC0003DMT400079215 | Potato | nucleus | 21.64 | 19.8 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.82 | 18.45 |
| CDY21105 | Canola | nucleus | 17.81 | 18.26 |
| CDY00009 | Canola | nucleus | 19.45 | 18.02 |
| CDY50767 | Canola | nucleus | 19.18 | 17.28 |
| CDY30023 | Canola | nucleus | 17.81 | 16.13 |
| CDX80681 | Canola | nucleus | 17.26 | 15.33 |
| CDY41910 | Canola | nucleus | 17.81 | 15.29 |
| Os09t0451700-00 | Rice | nucleus | 7.4 | 15.0 |
| CDY26346 | Canola | nucleus | 15.62 | 13.84 |
| EER96833 | Sorghum | nucleus | 16.16 | 13.35 |
| KXG25358 | Sorghum | nucleus, plastid | 15.62 | 13.1 |
| CDY68986 | Canola | nucleus | 12.05 | 12.98 |
| Zm00001d020688_P001 | Maize | nucleus | 14.79 | 12.62 |
| Zm00001d005865_P001 | Maize | nucleus | 14.25 | 11.87 |
| Zm00001d049991_P001 | Maize | nucleus, plastid | 13.7 | 10.96 |
| TraesCS5D01G241400.1 | Wheat | nucleus | 14.25 | 10.61 |
| CDX86188 | Canola | cytosol | 17.26 | 10.47 |
| TraesCS5B01G233000.1 | Wheat | nucleus | 13.97 | 10.43 |
| HORVU5Hr1G067630.1 | Barley | nucleus | 13.7 | 10.2 |
| TraesCS5A01G234500.1 | Wheat | nucleus | 13.7 | 10.2 |
| Os08t0467600-00 | Rice | nucleus | 13.7 | 9.4 |
| VIT_00s0999g00010.t01 | Wine grape | cytosol, nucleus | 4.38 | 2.65 |
Protein Annotations
| EnsemblPlants:CDY11061 | EnsemblPlantsGene:GSBRNA2T00049021001 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | ncoils:Coil | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF1 |
| PFAM:PF04504 | ProteinID:CDY11061 | ProteinID:CDY11061.1 | SEG:seg | UniParc:UPI0004EDF5FF | UniProt:A0A078FCM1 |
| MapMan:15.5.28 | : | : | : | : | : |
Description
BnaA03g47200DBnaA03g47200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FCM1]
Coordinates
chrLK032008:+:868162..869259
Molecular Weight (calculated)
40484.6 Da
IEP (calculated)
5.740
GRAVY (calculated)
-0.934
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPKDKIANP PVASSSEEEE EEEESGSSVE ESNSSDDEAG DVQSKLTQKP VAPPPPAKKP ESDSEEESES DSDSEPATKT KPLNAVVTKP IPPESSTAKR
101: SLKQADNEPK KKAKTSTTTE QAKKKPSGAD EEVKKISGEE AKKMFQRLFS ETDEIAMLQG FLDFTSTKGD PSENMDAFCD YVKTLIDFNA SKAQIVTKLQ
201: RCKKKFVNIV KNSLKRGKTE DQITYAKDLE QRTFELSRKI WGSDGVLPAK PRKKSKEVEL VSTPKKKTEV ETQKKVSVVE NHHLSESREM ALFFKAENGS
301: VLGLDESTVS GVWDMVEDGP KKREMEEKLK KLKAKQMELC LQRTALVDYT AKMIFKNNAS SSSSC
101: SLKQADNEPK KKAKTSTTTE QAKKKPSGAD EEVKKISGEE AKKMFQRLFS ETDEIAMLQG FLDFTSTKGD PSENMDAFCD YVKTLIDFNA SKAQIVTKLQ
201: RCKKKFVNIV KNSLKRGKTE DQITYAKDLE QRTFELSRKI WGSDGVLPAK PRKKSKEVEL VSTPKKKTEV ETQKKVSVVE NHHLSESREM ALFFKAENGS
301: VLGLDESTVS GVWDMVEDGP KKREMEEKLK KLKAKQMELC LQRTALVDYT AKMIFKNNAS SSSSC
001: MAPKKAEEVV ESPPVSSEEE ESGSSGEESE SSAEVPKKVE SSQKPESDSE GESESESSSG PEPESEPAKT IKLKPVGTKP IPETSGSAAT VPESSTAKRP
101: LKEAAPEAIK KQKTSDTEHV KKPITNDEVK KISSEDAKKM FQRLFSETDE IALLQGIIDF TSTKGDPYED IDAFCIYVKK LIDFDATKNQ IVTKLQRLKK
201: KFNNAVKNSL KKGKTEDDIE FAKDLEQKGF ELSRKIWGSN GVLVTGKSSR KKVGGTPAPK EMKLVAHSTP KKQQEEAKKP ERTEAKVVNT GLSIGKEIAS
301: FLNADNGSSC GLDESTLTAV WAKVADGAEK REVEEKWKKL KAKQFELCLQ RSGLVNETAK MIFKAYES
101: LKEAAPEAIK KQKTSDTEHV KKPITNDEVK KISSEDAKKM FQRLFSETDE IALLQGIIDF TSTKGDPYED IDAFCIYVKK LIDFDATKNQ IVTKLQRLKK
201: KFNNAVKNSL KKGKTEDDIE FAKDLEQKGF ELSRKIWGSN GVLVTGKSSR KKVGGTPAPK EMKLVAHSTP KKQQEEAKKP ERTEAKVVNT GLSIGKEIAS
301: FLNADNGSSC GLDESTLTAV WAKVADGAEK REVEEKWKKL KAKQFELCLQ RSGLVNETAK MIFKAYES
Arabidopsis Description
GEBPLGLABROUS1 enhancer-binding protein-like [Source:UniProtKB/Swiss-Prot;Acc:Q9SB42]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.