Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G159600.1 | Wheat | nucleus | 46.0 | 54.76 |
| TraesCS4D01G163600.1 | Wheat | nucleus | 45.52 | 54.18 |
| HORVU4Hr1G045570.1 | Barley | nucleus | 45.52 | 54.02 |
| TraesCS4A01G138100.1 | Wheat | nucleus | 45.28 | 53.74 |
| Os07t0636100-01 | Rice | nucleus | 31.48 | 51.79 |
| EER92218 | Sorghum | nucleus | 43.58 | 47.75 |
| Zm00001d047421_P001 | Maize | nucleus | 42.37 | 46.67 |
| Zm00001d029287_P001 | Maize | nucleus | 42.13 | 45.43 |
| VIT_14s0030g01600.t01 | Wine grape | cytosol, mitochondrion | 6.54 | 43.55 |
| Os01t0249900-01 | Rice | plastid | 24.21 | 32.05 |
| KRH34055 | Soybean | nucleus | 25.67 | 28.49 |
| KRG92750 | Soybean | nucleus | 24.21 | 28.33 |
| CDY21105 | Canola | nucleus | 23.49 | 27.25 |
| Os09t0451700-00 | Rice | nucleus | 11.38 | 26.11 |
| CDX80681 | Canola | nucleus | 25.67 | 25.79 |
| GSMUA_Achr8P22220_001 | Banana | nucleus | 26.63 | 25.52 |
| CDY00009 | Canola | nucleus | 24.21 | 25.38 |
| CDY30023 | Canola | nucleus | 24.46 | 25.06 |
| KRG96940 | Soybean | nucleus | 24.21 | 24.75 |
| KRH68705 | Soybean | nucleus | 24.21 | 24.69 |
| Bra009986.1-P | Field mustard | nucleus | 24.7 | 24.64 |
| PGSC0003DMT400009206 | Potato | nucleus | 24.94 | 24.52 |
| Solyc02g083750.1.1 | Tomato | nucleus | 24.94 | 24.47 |
| CDY50767 | Canola | nucleus | 23.73 | 24.2 |
| AT5G28040.2 | Thale cress | nucleus | 24.94 | 24.12 |
| PGSC0003DMT400057863 | Potato | nucleus | 25.67 | 23.71 |
| GSMUA_Achr10P... | Banana | mitochondrion | 24.21 | 23.64 |
| CDY41910 | Canola | nucleus | 23.97 | 23.29 |
| Bra040416.1-P | Field mustard | nucleus | 23.73 | 23.06 |
| AT3G04930.1 | Thale cress | nucleus | 25.18 | 22.81 |
| Solyc01g097890.2.1 | Tomato | nucleus | 24.94 | 22.74 |
| KRG92748 | Soybean | cytosol | 19.37 | 22.41 |
| Bra040116.1-P | Field mustard | nucleus | 20.1 | 22.37 |
| KRH34056 | Soybean | nucleus | 18.64 | 20.53 |
| Bra036116.1-P | Field mustard | nucleus | 16.95 | 19.55 |
| CDY68986 | Canola | nucleus | 15.98 | 19.47 |
| CDX86188 | Canola | cytosol | 24.94 | 17.11 |
| Os08t0467600-00 | Rice | nucleus | 15.01 | 11.65 |
Protein Annotations
| EnsemblPlants:Os03t0370250-01 | EnsemblPlantsGene:Os03g0370250 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | ncoils:Coil | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF2 |
| PFAM:PF04504 | ProteinID:BAH92165.1 | ProteinID:BAS84359.1 | SEG:seg | UniParc:UPI0001B66152 | UniProt:C7J0C0 |
| MapMan:15.5.28 | : | : | : | : | : |
Description
Protein of unknown function DUF573 family protein. (Os03t0370250-01)
Coordinates
chr3:-:14538137..14539609
Molecular Weight (calculated)
43708.0 Da
IEP (calculated)
6.927
GRAVY (calculated)
-0.465
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: GHVKHGTTQI PHPTPTLIPT RAAAATDPHP IRSPNPMLPT VVDDPSAAAA AAVGAAASSS FPDADVYGNG DSDDIDFPSD PNHATTQAFS SAAAAAAAAG
101: PGGGGGAGSG SGGERRPLFQ RLWTEEDEIV ILRAFAEFTA QRGTAFASHQ YDTDPFYEDM RRRLQLDFSK SQLVEKLRRL KRKYRNCVDR LRATGQSFSF
201: RSPHEQAIFE IARGIWRPTS DKHGRDADSD DDALPDAAAA VAVPAPANGE VRSPSSTRAQ QRRGRRRRTA AAAAATATAA DASEPPQPYP PAPAPAPVKA
301: EDALPHFFPQ GAAVTATAHV HGVDPASAAA SAAANAEGGI LAPLFKEMVR AMLTAGMAPP SLEPPAPGIP MKGERWRQQR ILELEVYLRR IDLLQDQVRT
401: ALEELKSTPP ATQ
101: PGGGGGAGSG SGGERRPLFQ RLWTEEDEIV ILRAFAEFTA QRGTAFASHQ YDTDPFYEDM RRRLQLDFSK SQLVEKLRRL KRKYRNCVDR LRATGQSFSF
201: RSPHEQAIFE IARGIWRPTS DKHGRDADSD DDALPDAAAA VAVPAPANGE VRSPSSTRAQ QRRGRRRRTA AAAAATATAA DASEPPQPYP PAPAPAPVKA
301: EDALPHFFPQ GAAVTATAHV HGVDPASAAA SAAANAEGGI LAPLFKEMVR AMLTAGMAPP SLEPPAPGIP MKGERWRQQR ILELEVYLRR IDLLQDQVRT
401: ALEELKSTPP ATQ
001: MTSDHRDALF SLELESPDPD EGGVADGGES DTDEDLRDND DVVMPGTNEA EAEDDDPEEE DLNSPSTSSL PMVSTISATA VVSGTPTATS STGAVTVALP
101: AGSAVPVSVI PVDSDPKWHR MTEIVHQRPP IDDSRRLFQR LWTDEDEIEL LRGFLDYMTM HRGSSSHPPD TAPFYEQIKS KLQLDFNKNQ LVEKLRRLKK
201: KYRNVMSKIS SGKEVFFKSP HDQSTFEISR KIWNQTGKII GFEDNNVMDF EETNNHHNTT NGNYSTFNSP SSNPTLELDS ENGIEKKLTM SSSSVSRKRS
301: RSRIGKIEED NKPVITPSDG PIASNVNLNE AAAVGIGGNL GGLIEETVKN CVSPVIKEMM NGTTSMMMAA MGGGFPGLGG GGGGGGGHGF GSLSPMFTRP
401: FNFGFGVEGG GNKAVADERW RKQQILELEV YSRRLELVQE QIRTTLNELK TMPSGI
101: AGSAVPVSVI PVDSDPKWHR MTEIVHQRPP IDDSRRLFQR LWTDEDEIEL LRGFLDYMTM HRGSSSHPPD TAPFYEQIKS KLQLDFNKNQ LVEKLRRLKK
201: KYRNVMSKIS SGKEVFFKSP HDQSTFEISR KIWNQTGKII GFEDNNVMDF EETNNHHNTT NGNYSTFNSP SSNPTLELDS ENGIEKKLTM SSSSVSRKRS
301: RSRIGKIEED NKPVITPSDG PIASNVNLNE AAAVGIGGNL GGLIEETVKN CVSPVIKEMM NGTTSMMMAA MGGGFPGLGG GGGGGGGHGF GSLSPMFTRP
401: FNFGFGVEGG GNKAVADERW RKQQILELEV YSRRLELVQE QIRTTLNELK TMPSGI
Arabidopsis Description
Probable transcription factor At3g04930 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAV7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.