Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34055 | Soybean | nucleus | 71.39 | 67.74 |
| KRH68705 | Soybean | nucleus | 53.54 | 46.67 |
| KRG96940 | Soybean | nucleus | 50.42 | 44.06 |
| Solyc02g083750.1.1 | Tomato | nucleus | 44.48 | 37.29 |
| PGSC0003DMT400009206 | Potato | nucleus | 42.78 | 35.95 |
| Os07t0636100-01 | Rice | nucleus | 22.38 | 31.47 |
| TraesCS4B01G159600.1 | Wheat | nucleus | 30.88 | 31.41 |
| TraesCS4D01G163600.1 | Wheat | nucleus | 30.88 | 31.41 |
| Solyc01g097890.2.1 | Tomato | nucleus | 40.23 | 31.35 |
| TraesCS4A01G138100.1 | Wheat | nucleus | 30.59 | 31.03 |
| HORVU4Hr1G045570.1 | Barley | nucleus | 30.03 | 30.46 |
| TraesCS3B01G200500.1 | Wheat | nucleus | 32.01 | 30.05 |
| PGSC0003DMT400057863 | Potato | nucleus | 37.39 | 29.53 |
| TraesCS3A01G165200.1 | Wheat | nucleus | 32.86 | 29.15 |
| Zm00001d022266_P001 | Maize | nucleus | 30.59 | 28.88 |
| TraesCS3D01G176400.1 | Wheat | nucleus | 32.29 | 28.64 |
| HORVU5Hr1G051570.1 | Barley | plastid | 27.76 | 28.49 |
| KRG92748 | Soybean | cytosol | 28.61 | 28.29 |
| EES02686 | Sorghum | nucleus | 32.29 | 28.22 |
| Zm00001d006945_P001 | Maize | nucleus | 29.46 | 28.18 |
| EER97613 | Sorghum | nucleus | 29.75 | 28.0 |
| GSMUA_Achr8P22220_001 | Banana | nucleus | 33.71 | 27.61 |
| EES02423 | Sorghum | nucleus | 31.73 | 27.59 |
| Zm00001d040254_P001 | Maize | nucleus | 31.16 | 27.57 |
| HORVU3Hr1G034150.3 | Barley | nucleus | 31.44 | 27.48 |
| TraesCS2B01G176900.1 | Wheat | nucleus | 29.18 | 27.32 |
| TraesCS2D01G156800.1 | Wheat | nucleus | 28.61 | 26.72 |
| TraesCS2A01G151700.1 | Wheat | nucleus | 28.33 | 26.45 |
| Os01t0249900-01 | Rice | plastid | 23.23 | 26.28 |
| EER92218 | Sorghum | nucleus | 28.05 | 26.26 |
| Zm00001d047421_P001 | Maize | nucleus | 27.76 | 26.13 |
| KRH34056 | Soybean | nucleus | 27.76 | 26.13 |
| HORVU2Hr1G027390.1 | Barley | plastid | 27.48 | 25.94 |
| GSMUA_Achr10P... | Banana | mitochondrion | 30.31 | 25.3 |
| Zm00001d029287_P001 | Maize | nucleus | 26.91 | 24.8 |
| Os03t0370250-01 | Rice | cytosol | 28.33 | 24.21 |
| KRH10688 | Soybean | nucleus | 22.38 | 18.08 |
| KRH21647 | Soybean | nucleus | 19.55 | 15.4 |
| KRH57853 | Soybean | nucleus | 16.15 | 14.73 |
Protein Annotations
| EMBL:ACUP02012766 | EnsemblPlants:KRG92750 | EnsemblPlantsGene:GLYMA_20G228500 | EntrezGene:100817182 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | ncoils:Coil |
| PANTHER:PTHR31662 | PANTHER:PTHR31662:SF6 | PFAM:PF04504 | ProteinID:KRG92750 | ProteinID:KRG92750.1 | SEG:seg |
| UniParc:UPI000233DD68 | UniProt:I1NIU1 | MapMan:15.5.28 | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:46281417..46282947
Molecular Weight (calculated)
39649.3 Da
IEP (calculated)
4.382
GRAVY (calculated)
-0.778
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MESDLNDAVF PEEDLDDDDE TPEDEEEEED DDVLDDDETE PPPSVIAVAP PASETLDTAL IPISSVADSS PKPLRTELIE EKKALDDSRR LFQRLWTDED
101: EIGLLQGFLE YTAQRGSSHH NDTALFYDQI KSKLQLGFNK NQLVEKLRRL KKKYRNVLNK ISSGKEVSFK SPHDRATFEI SRRIWSNTAP ITGPVEDDDE
201: IITNPNFGNS AKMPISRKRS RPQKRELNDG STLNRDNNCN SNSNNNNNNE NCNSRLNLQG LIEETVRSCV SPVLKELACG TGGMGLGRGF ALNPLQMPMP
301: MSLMNLGIVG ETAMDEKWRK QQILELEVYS KRLELVQNEI KVALEELRSA GGG
101: EIGLLQGFLE YTAQRGSSHH NDTALFYDQI KSKLQLGFNK NQLVEKLRRL KKKYRNVLNK ISSGKEVSFK SPHDRATFEI SRRIWSNTAP ITGPVEDDDE
201: IITNPNFGNS AKMPISRKRS RPQKRELNDG STLNRDNNCN SNSNNNNNNE NCNSRLNLQG LIEETVRSCV SPVLKELACG TGGMGLGRGF ALNPLQMPMP
301: MSLMNLGIVG ETAMDEKWRK QQILELEVYS KRLELVQNEI KVALEELRSA GGG
001: MASDQRDTDF SAESPDLEED GGGGGGGRGG GETESDEDVV IPEPNEAEDD DHDPDPDPEY EDLNSPSMIS RAPATKSSSG TVTVALPAGS AVPVASIPSD
101: SDQKWHRMTE IVHQRPPIDD SRRLFQRLWT DEDEIELLRG FLDYITNHRG NSSHPPDTAP FYEQIKSKLQ LEFNKNQLVE KLRRLKKKYR NVMSKFSSGK
201: EVFFKSPHDQ ATFDISRKIW NQTGKIIGFE DNNVMDLEET NHVNNANGSS GFNVSVIGNA NVDVDSENGL EKKVTISRKR SRSRIGKIDE DKPVLAPCDG
301: VIPNAVNLNE NVAVGCDFGD GRNLGVLIEE TVKNCVSPMI KEMMNSTTGM MMAATGGFPG GGAHALGVLS PMLMPSMNLG FGGKGVGDER WRRQQILELE
401: VYSRRLELVQ EQIRATVNEL KTMPNGG
101: SDQKWHRMTE IVHQRPPIDD SRRLFQRLWT DEDEIELLRG FLDYITNHRG NSSHPPDTAP FYEQIKSKLQ LEFNKNQLVE KLRRLKKKYR NVMSKFSSGK
201: EVFFKSPHDQ ATFDISRKIW NQTGKIIGFE DNNVMDLEET NHVNNANGSS GFNVSVIGNA NVDVDSENGL EKKVTISRKR SRSRIGKIDE DKPVLAPCDG
301: VIPNAVNLNE NVAVGCDFGD GRNLGVLIEE TVKNCVSPMI KEMMNSTTGM MMAATGGFPG GGAHALGVLS PMLMPSMNLG FGGKGVGDER WRRQQILELE
401: VYSRRLELVQ EQIRATVNEL KTMPNGG
Arabidopsis Description
Probable transcription factor At5g28040 [Source:UniProtKB/Swiss-Prot;Acc:F4K5T4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.