Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G034150.3 | Barley | nucleus | 89.24 | 75.99 |
| TraesCS3B01G200500.1 | Wheat | nucleus | 76.16 | 69.68 |
| TraesCS3A01G165200.1 | Wheat | nucleus | 80.23 | 69.35 |
| TraesCS3D01G176400.1 | Wheat | nucleus | 79.65 | 68.84 |
| EES02686 | Sorghum | nucleus | 61.05 | 51.98 |
| Os01t0249900-01 | Rice | plastid | 46.22 | 50.96 |
| Zm00001d040254_P001 | Maize | nucleus | 57.56 | 49.62 |
| EES02423 | Sorghum | nucleus | 58.14 | 49.26 |
| VIT_14s0030g01600.t01 | Wine grape | cytosol, mitochondrion | 7.85 | 43.55 |
| HORVU2Hr1G027390.1 | Barley | plastid | 37.79 | 34.76 |
| HORVU4Hr1G045570.1 | Barley | nucleus | 33.43 | 33.05 |
| GSMUA_Achr8P22220_001 | Banana | nucleus | 35.76 | 28.54 |
| KRG92750 | Soybean | nucleus | 28.49 | 27.76 |
| KRH34055 | Soybean | nucleus | 28.78 | 26.61 |
| KRH68705 | Soybean | nucleus | 31.1 | 26.42 |
| CDY21105 | Canola | nucleus | 27.33 | 26.4 |
| KRG96940 | Soybean | nucleus | 30.81 | 26.24 |
| CDY00009 | Canola | nucleus | 29.07 | 25.38 |
| PGSC0003DMT400057863 | Potato | nucleus | 32.56 | 25.06 |
| GSMUA_Achr10P... | Banana | mitochondrion | 30.52 | 24.82 |
| PGSC0003DMT400009206 | Potato | nucleus | 29.07 | 23.81 |
| CDX80681 | Canola | nucleus | 28.2 | 23.6 |
| Solyc02g083750.1.1 | Tomato | nucleus | 28.78 | 23.52 |
| CDY50767 | Canola | nucleus | 27.33 | 23.21 |
| CDY41910 | Canola | nucleus | 28.49 | 23.06 |
| Bra009986.1-P | Field mustard | nucleus | 27.62 | 22.95 |
| CDY30023 | Canola | nucleus | 26.74 | 22.83 |
| Bra040416.1-P | Field mustard | nucleus | 27.33 | 22.12 |
| Solyc01g097890.2.1 | Tomato | nucleus | 28.78 | 21.85 |
| AT5G28040.2 | Thale cress | nucleus | 26.74 | 21.55 |
| AT3G04930.1 | Thale cress | nucleus | 28.2 | 21.27 |
| Bra040116.1-P | Field mustard | nucleus | 21.51 | 19.95 |
| KRG92748 | Soybean | cytosol | 20.06 | 19.33 |
| CDY68986 | Canola | nucleus | 18.6 | 18.88 |
| Bra036116.1-P | Field mustard | nucleus | 18.9 | 18.16 |
| KRH34056 | Soybean | nucleus | 18.6 | 17.07 |
| CDX86188 | Canola | cytosol | 28.49 | 16.28 |
| HORVU5Hr1G067630.1 | Barley | nucleus | 17.44 | 12.24 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G051570.1 | EnsemblPlantsGene:HORVU5Hr1G051570 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF14 | PFAM:PF04504 |
| SEG:seg | UniParc:UPI000B47D4AB | UniProt:A0A287R733 | MapMan:15.5.28 | : | : |
Description
No Description!
Coordinates
chrchr5H:-:403148104..403152023
Molecular Weight (calculated)
37186.4 Da
IEP (calculated)
10.330
GRAVY (calculated)
-0.343
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLPLSSPNQ PAQFRRLRRR GRVPRRLFQR LWTDEEELLI LRGFLEFTSR RGTAFASHQY DTGPFYEEIR RKLSFDFSKN QLIEKLRRLK KKYRVCATRM
101: ASQGAAFAFK SAHEGAIYDV ARHIWRPAFK RDGAGGDASD EDDINPAEAA AVAAAAAAAA AEPPAAVEEG GGGSASAHTP RGRGSRRGRK RTAQEMEAHA
201: FPATPAPMLT DVAQEPAVAA FESSVPVIAQ PPSVPAAPLP PYPVTTNGPS EAHVRSILSP LLKELISSVA VPGQNVPGLG LGMGFGGADI LGAGLGVAGL
301: SPRVPGDDKW RQQQVLELEV YLKRIELVRE QVMAALQQLR SSQS
101: ASQGAAFAFK SAHEGAIYDV ARHIWRPAFK RDGAGGDASD EDDINPAEAA AVAAAAAAAA AEPPAAVEEG GGGSASAHTP RGRGSRRGRK RTAQEMEAHA
201: FPATPAPMLT DVAQEPAVAA FESSVPVIAQ PPSVPAAPLP PYPVTTNGPS EAHVRSILSP LLKELISSVA VPGQNVPGLG LGMGFGGADI LGAGLGVAGL
301: SPRVPGDDKW RQQQVLELEV YLKRIELVRE QVMAALQQLR SSQS
001: MTKKLNPLED PPTATSSDED DVETSEAGEA SDDSSSSEED VPIKIRIKSP SATTAAAPPA KSTAVSTAAD SDSGSETETD SDSESTNPPN SGSGKTIALN
101: TVNLKKKEDP TSSSATLALP AMKSGTKRPA SEAAATTSTK RVKKDEESVK KPGGFQRLWS EEDEILVLQG MIDFKADTGK SPYVDTNAFY DFLKKSISFE
201: VSKNQFMDKI RSLRKKYIGK EGRNEPSFVK AHDKKAFELS KFIWGPKGIA LDSNVKSNGV SKKSVAKKKI DSVKQELVFA GGSSTNGKKV EEDGGDDGCD
301: WFDNSSLVRM IASLGVDEYY VKQQWSLVSV ESKKIVEEKY KLLQAKELEF VLEKTKFLNE VASMFVEASK NKPLDT
101: TVNLKKKEDP TSSSATLALP AMKSGTKRPA SEAAATTSTK RVKKDEESVK KPGGFQRLWS EEDEILVLQG MIDFKADTGK SPYVDTNAFY DFLKKSISFE
201: VSKNQFMDKI RSLRKKYIGK EGRNEPSFVK AHDKKAFELS KFIWGPKGIA LDSNVKSNGV SKKSVAKKKI DSVKQELVFA GGSSTNGKKV EEDGGDDGCD
301: WFDNSSLVRM IASLGVDEYY VKQQWSLVSV ESKKIVEEKY KLLQAKELEF VLEKTKFLNE VASMFVEASK NKPLDT
Arabidopsis Description
Probable transcription factor At1g61730 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.