Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g083750.1.1 | Tomato | nucleus | 75.0 | 74.82 |
| KRG92750 | Soybean | nucleus | 35.95 | 42.78 |
| KRH68705 | Soybean | nucleus | 39.52 | 40.99 |
| KRG96940 | Soybean | nucleus | 38.81 | 40.35 |
| KRH34055 | Soybean | nucleus | 34.29 | 38.71 |
| PGSC0003DMT400057863 | Potato | nucleus | 41.19 | 38.7 |
| TraesCS4B01G159600.1 | Wheat | nucleus | 26.43 | 31.99 |
| EER97613 | Sorghum | nucleus | 28.1 | 31.47 |
| TraesCS4D01G163600.1 | Wheat | nucleus | 25.95 | 31.41 |
| TraesCS4A01G138100.1 | Wheat | nucleus | 25.95 | 31.32 |
| TraesCS2B01G176900.1 | Wheat | nucleus | 28.1 | 31.3 |
| TraesCS2D01G156800.1 | Wheat | nucleus | 28.1 | 31.22 |
| Zm00001d022266_P001 | Maize | nucleus | 27.62 | 31.02 |
| Zm00001d006945_P001 | Maize | nucleus | 27.14 | 30.89 |
| Os07t0636100-01 | Rice | nucleus | 18.1 | 30.28 |
| HORVU4Hr1G045570.1 | Barley | nucleus | 25.0 | 30.17 |
| TraesCS2A01G151700.1 | Wheat | nucleus | 26.9 | 29.89 |
| TraesCS3B01G200500.1 | Wheat | nucleus | 26.19 | 29.26 |
| HORVU2Hr1G027390.1 | Barley | plastid | 25.95 | 29.14 |
| HORVU5Hr1G051570.1 | Barley | plastid | 23.81 | 29.07 |
| TraesCS3A01G165200.1 | Wheat | nucleus | 27.38 | 28.89 |
| Zm00001d047421_P001 | Maize | nucleus | 25.48 | 28.53 |
| GSMUA_Achr8P22220_001 | Banana | nucleus | 28.81 | 28.07 |
| Zm00001d040254_P001 | Maize | nucleus | 26.43 | 27.82 |
| EER92218 | Sorghum | nucleus | 24.76 | 27.59 |
| EES02686 | Sorghum | nucleus | 26.43 | 27.48 |
| TraesCS3D01G176400.1 | Wheat | nucleus | 25.71 | 27.14 |
| EES02423 | Sorghum | nucleus | 26.19 | 27.09 |
| Zm00001d029287_P001 | Maize | nucleus | 24.29 | 26.63 |
| Os01t0249900-01 | Rice | plastid | 19.52 | 26.28 |
| HORVU3Hr1G034150.3 | Barley | nucleus | 25.24 | 26.24 |
| Os03t0370250-01 | Rice | cytosol | 24.52 | 24.94 |
| GSMUA_Achr10P... | Banana | mitochondrion | 23.33 | 23.17 |
| PGSC0003DMT400079215 | Potato | nucleus | 15.24 | 16.04 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400009206 | EnsemblPlantsGene:PGSC0003DMG400003572 | EntrezGene:102593405 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | ncoils:Coil | PANTHER:PTHR31662 |
| PANTHER:PTHR31662:SF6 | PFAM:PF04504 | PGSC:PGSC0003DMG400003572 | RefSeq:XP_006340745.1 | SEG:seg | UniParc:UPI000294992C |
| UniProt:M0ZVR8 | MapMan:15.5.28 | : | : | : | : |
Description
Transcription regulator [Source:PGSC_GENE;Acc:PGSC0003DMG400003572]
Coordinates
chr2:-:39271310..39272980
Molecular Weight (calculated)
46630.2 Da
IEP (calculated)
4.405
GRAVY (calculated)
-0.675
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLEDQAVV YNDDDLDDEE DDEESGPPQN EAVVDEDDDV DVEEEEEEED DSTSSPPVPV SNHSGAGEVT IAVVGVPATD SLCIEPKRER INDFGVIPAT
101: IVVEEKKPLV LDDSRKLFQR LWMDEDEIEL LQGFLEYTTQ RGGINSSSHH HHDTGAFYDQ IKNKLQLDFN KNQLVEKLRR LKKKYRTVMS KMGSGKEFVF
201: KSPHDQATFE ISRKIWSNAG PIVVRSSGPP PPPPDDGGFD DEDSHLNLNN ANFIDHSPNF NLNPNGIDVK TPKSKKRSRG GTINSEEKPG YIQQYYQPSG
301: GATNVILPAT PVSMAAPQAT AAAAASIPSL IEETVRSCLS PIFKELFNNL KGSRYSGFGM SLGPTPLGFG NSSMSSDINM KTDEKWRKQQ ILELEVYSKR
401: LELVQDQIKA QLEELRSMSI
101: IVVEEKKPLV LDDSRKLFQR LWMDEDEIEL LQGFLEYTTQ RGGINSSSHH HHDTGAFYDQ IKNKLQLDFN KNQLVEKLRR LKKKYRTVMS KMGSGKEFVF
201: KSPHDQATFE ISRKIWSNAG PIVVRSSGPP PPPPDDGGFD DEDSHLNLNN ANFIDHSPNF NLNPNGIDVK TPKSKKRSRG GTINSEEKPG YIQQYYQPSG
301: GATNVILPAT PVSMAAPQAT AAAAASIPSL IEETVRSCLS PIFKELFNNL KGSRYSGFGM SLGPTPLGFG NSSMSSDINM KTDEKWRKQQ ILELEVYSKR
401: LELVQDQIKA QLEELRSMSI
001: MASDQRDTDF SAESPDLEED GGGGGGGRGG GETESDEDVV IPEPNEAEDD DHDPDPDPEY EDLNSPSMIS RAPATKSSSG TVTVALPAGS AVPVASIPSD
101: SDQKWHRMTE IVHQRPPIDD SRRLFQRLWT DEDEIELLRG FLDYITNHRG NSSHPPDTAP FYEQIKSKLQ LEFNKNQLVE KLRRLKKKYR NVMSKFSSGK
201: EVFFKSPHDQ ATFDISRKIW NQTGKIIGFE DNNVMDLEET NHVNNANGSS GFNVSVIGNA NVDVDSENGL EKKVTISRKR SRSRIGKIDE DKPVLAPCDG
301: VIPNAVNLNE NVAVGCDFGD GRNLGVLIEE TVKNCVSPMI KEMMNSTTGM MMAATGGFPG GGAHALGVLS PMLMPSMNLG FGGKGVGDER WRRQQILELE
401: VYSRRLELVQ EQIRATVNEL KTMPNGG
101: SDQKWHRMTE IVHQRPPIDD SRRLFQRLWT DEDEIELLRG FLDYITNHRG NSSHPPDTAP FYEQIKSKLQ LEFNKNQLVE KLRRLKKKYR NVMSKFSSGK
201: EVFFKSPHDQ ATFDISRKIW NQTGKIIGFE DNNVMDLEET NHVNNANGSS GFNVSVIGNA NVDVDSENGL EKKVTISRKR SRSRIGKIDE DKPVLAPCDG
301: VIPNAVNLNE NVAVGCDFGD GRNLGVLIEE TVKNCVSPMI KEMMNSTTGM MMAATGGFPG GGAHALGVLS PMLMPSMNLG FGGKGVGDER WRRQQILELE
401: VYSRRLELVQ EQIRATVNEL KTMPNGG
Arabidopsis Description
Probable transcription factor At5g28040 [Source:UniProtKB/Swiss-Prot;Acc:F4K5T4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.