Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d006945_P001 | Maize | nucleus | 55.38 | 37.67 |
| TraesCS2B01G176900.1 | Wheat | nucleus | 56.57 | 37.67 |
| TraesCS2D01G156800.1 | Wheat | nucleus | 56.18 | 37.3 |
| Zm00001d022266_P001 | Maize | nucleus | 54.58 | 36.63 |
| TraesCS2A01G151700.1 | Wheat | nucleus | 54.58 | 36.24 |
| EER97613 | Sorghum | nucleus | 53.39 | 35.73 |
| HORVU2Hr1G027390.1 | Barley | plastid | 49.4 | 33.16 |
| Os03t0370250-01 | Rice | cytosol | 51.79 | 31.48 |
| KRH34055 | Soybean | nucleus | 33.47 | 22.58 |
| KRG92750 | Soybean | nucleus | 31.47 | 22.38 |
| Os09t0451700-00 | Rice | nucleus | 15.54 | 21.67 |
| CDY21105 | Canola | nucleus | 30.68 | 21.63 |
| Os01t0249900-01 | Rice | plastid | 26.29 | 21.15 |
| CDY30023 | Canola | nucleus | 31.87 | 19.85 |
| CDY50767 | Canola | nucleus | 30.68 | 19.01 |
| CDX80681 | Canola | nucleus | 31.08 | 18.98 |
| AT3G04930.1 | Thale cress | nucleus | 33.86 | 18.64 |
| Bra009986.1-P | Field mustard | nucleus | 30.68 | 18.6 |
| CDY00009 | Canola | nucleus | 29.08 | 18.53 |
| GSMUA_Achr10P... | Banana | mitochondrion | 31.08 | 18.44 |
| GSMUA_Achr8P22220_001 | Banana | nucleus | 31.47 | 18.33 |
| Solyc02g083750.1.1 | Tomato | nucleus | 30.68 | 18.29 |
| KRH68705 | Soybean | nucleus | 29.48 | 18.27 |
| Bra040416.1-P | Field mustard | nucleus | 30.68 | 18.12 |
| PGSC0003DMT400009206 | Potato | nucleus | 30.28 | 18.1 |
| KRG96940 | Soybean | nucleus | 29.08 | 18.07 |
| Solyc01g097890.2.1 | Tomato | nucleus | 31.87 | 17.66 |
| PGSC0003DMT400057863 | Potato | nucleus | 31.08 | 17.45 |
| KRG92748 | Soybean | cytosol | 24.7 | 17.37 |
| CDY41910 | Canola | nucleus | 29.08 | 17.18 |
| AT5G28040.2 | Thale cress | nucleus | 29.08 | 17.1 |
| VIT_14s0030g01600.t01 | Wine grape | cytosol, mitochondrion | 3.98 | 16.13 |
| Bra040116.1-P | Field mustard | nucleus | 23.51 | 15.9 |
| KRH34056 | Soybean | nucleus | 22.31 | 14.93 |
| CDX86188 | Canola | cytosol | 30.68 | 12.79 |
| Bra036116.1-P | Field mustard | nucleus | 15.54 | 10.89 |
| CDY68986 | Canola | nucleus | 13.94 | 10.32 |
| Os08t0467600-00 | Rice | nucleus | 20.72 | 9.77 |
Protein Annotations
| EMBL:AK068356 | EnsemblPlants:Os07t0636100-01 | EnsemblPlantsGene:Os07g0636100 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF2 |
| PFAM:PF04504 | ProteinID:BAF22306.1 | ProteinID:BAT02819.1 | SEG:seg | UniParc:UPI0000E12C11 | UniProt:Q0D4B7 |
| MapMan:15.5.28 | : | : | : | : | : |
Description
Protein of unknown function DUF573 family protein. (Os07t0636100-01)
Coordinates
chr7:+:26412975..26414449
Molecular Weight (calculated)
26660.4 Da
IEP (calculated)
4.734
GRAVY (calculated)
-0.566
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPAGGYPSA AAISFPDADV DDDSDDGDFT DAPLIDPSDP TFPNPASSSA AAAAMATPAS AGGGSGSVGG VGSSSGGGER RPLFQRLWTE EDEIVILRGF
101: AEFTAARGTA FASHQYDTDP FYEDMRGRLQ LGFSKSQLVE KLRRLKRKYR NCVSRLRGSG SAFSFRSPHE QAIFEIARNI WRPTNKHGRD GDSDDEDATQ
201: VTPAPVPVNT SPNDHNANYS DNGGLGTPQI AGHATSAGCF RCRQELLDAS V
101: AEFTAARGTA FASHQYDTDP FYEDMRGRLQ LGFSKSQLVE KLRRLKRKYR NCVSRLRGSG SAFSFRSPHE QAIFEIARNI WRPTNKHGRD GDSDDEDATQ
201: VTPAPVPVNT SPNDHNANYS DNGGLGTPQI AGHATSAGCF RCRQELLDAS V
001: MTSDHRDALF SLELESPDPD EGGVADGGES DTDEDLRDND DVVMPGTNEA EAEDDDPEEE DLNSPSTSSL PMVSTISATA VVSGTPTATS STGAVTVALP
101: AGSAVPVSVI PVDSDPKWHR MTEIVHQRPP IDDSRRLFQR LWTDEDEIEL LRGFLDYMTM HRGSSSHPPD TAPFYEQIKS KLQLDFNKNQ LVEKLRRLKK
201: KYRNVMSKIS SGKEVFFKSP HDQSTFEISR KIWNQTGKII GFEDNNVMDF EETNNHHNTT NGNYSTFNSP SSNPTLELDS ENGIEKKLTM SSSSVSRKRS
301: RSRIGKIEED NKPVITPSDG PIASNVNLNE AAAVGIGGNL GGLIEETVKN CVSPVIKEMM NGTTSMMMAA MGGGFPGLGG GGGGGGGGGF VYNLLY
101: AGSAVPVSVI PVDSDPKWHR MTEIVHQRPP IDDSRRLFQR LWTDEDEIEL LRGFLDYMTM HRGSSSHPPD TAPFYEQIKS KLQLDFNKNQ LVEKLRRLKK
201: KYRNVMSKIS SGKEVFFKSP HDQSTFEISR KIWNQTGKII GFEDNNVMDF EETNNHHNTT NGNYSTFNSP SSNPTLELDS ENGIEKKLTM SSSSVSRKRS
301: RSRIGKIEED NKPVITPSDG PIASNVNLNE AAAVGIGGNL GGLIEETVKN CVSPVIKEMM NGTTSMMMAA MGGGFPGLGG GGGGGGGGGF VYNLLY
Arabidopsis Description
Probable transcription factor At3g04930 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAV7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.