Factsheet for Bra014239.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45052	Canola	mitochondrion	99.6	99.6
AT1G50140.1	Thale cress	mitochondrion	86.69	86.34
Os02t0749150-01	Rice	mitochondrion	21.92	81.72
Os06t0225900-01	Rice	cytosol	28.73	78.2
HORVU6Hr1G038660.1	Barley	cytosol, mitochondrion	13.61	76.4
Bra038230.1-P	Field mustard	cytosol, mitochondrion, plastid	71.57	72.08
HORVU4Hr1G059020.1	Barley	cytosol, endoplasmic reticulum	17.12	70.95
HORVU4Hr1G059040.2	Barley	cytosol	17.52	69.44
HORVU3Hr1G072480.2	Barley	cytosol	16.92	67.06
HORVU5Hr1G104980.1	Barley	endoplasmic reticulum, mitochondrion	18.72	65.38
VIT_01s0011g02220.t01	Wine grape	cytosol, mitochondrion, plastid	63.56	63.5
Solyc02g014350.2.1	Tomato	mitochondrion	63.06	63.19
KRH29161	Soybean	cytosol, mitochondrion	63.36	60.98
KRH24190	Soybean	mitochondrion	63.16	60.73
EES05524	Sorghum	plastid	57.26	57.95
Zm00001d052248_P009	Maize	mitochondrion	57.06	57.75
TraesCS6D01G284600.1	Wheat	mitochondrion	56.66	57.58
TraesCS7D01G186200.1	Wheat	mitochondrion	55.96	57.51
TraesCS7A01G184700.1	Wheat	mitochondrion	55.86	57.47
TraesCS7B01G089500.1	Wheat	mitochondrion	55.86	57.35
TraesCS6B01G333700.1	Wheat	mitochondrion	56.16	57.3
TraesCS6A01G305500.1	Wheat	mitochondrion	56.36	57.27
OQU76102	Sorghum	mitochondrion	55.26	57.02
HORVU6Hr1G075440.6	Barley	mitochondrion	56.26	57.0
GSMUA_Achr7P07310_001	Banana	mitochondrion	59.66	56.82
HORVU7Hr1G037870.1	Barley	plastid	55.56	53.42
Bra019030.1-P	Field mustard	endoplasmic reticulum, plasma membrane	15.62	39.8
Bra026316.1-P	Field mustard	endoplasmic reticulum	15.52	39.54
Bra003048.1-P	Field mustard	endoplasmic reticulum	14.41	36.27
Bra004917.1-P	Field mustard	cytosol	11.21	35.11
Bra029063.1-P	Field mustard	endoplasmic reticulum	13.71	35.04
Bra005414.1-P	Field mustard	cytosol	12.91	32.91
Bra024235.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	27.03	32.89
Bra029104.1-P	Field mustard	extracellular, plasma membrane	26.53	32.2
Bra027756.1-P	Field mustard	endoplasmic reticulum	26.73	32.13
Bra003102.1-P	Field mustard	extracellular, plasma membrane	26.23	31.87
Bra026293.1-P	Field mustard	endoplasmic reticulum, extracellular	26.23	31.6
Bra018640.1-P	Field mustard	cytosol	13.11	30.47
Bra000503.1-P	Field mustard	cytosol	12.81	29.56
Bra012009.1-P	Field mustard	cytosol	12.81	29.56
Bra039332.1-P	Field mustard	cytosol	12.11	27.69
Bra003561.1-P	Field mustard	cytosol	13.91	26.18
Bra018548.1-P	Field mustard	plastid	31.73	26.0
Bra008479.1-P	Field mustard	cytosol	13.71	25.95
Bra000878.1-P	Field mustard	plastid	31.93	25.48
Bra032579.1-P	Field mustard	plastid	29.23	25.46
Bra036265.1-P	Field mustard	plastid	31.93	24.73
Bra032982.1-P	Field mustard	plastid	15.82	24.38
Bra022979.1-P	Field mustard	plastid	13.61	23.57
Bra033356.1-P	Field mustard	cytosol, plastid	31.43	21.06

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
EnsemblPlantsGene:Bra014239	EnsemblPlants:Bra014239.1	EnsemblPlants:Bra014239.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	UniProt:M4DCM3	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674
PANTHER:PTHR23074	PANTHER:PTHR23074:SF95	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0002546177	SEG:seg

Description

AT1G50140 (E=0.0) | ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding

Coordinates

chrA08:+:2277655..2285056

Molecular Weight (calculated)

111851.0 Da

IEP (calculated)

5.968

GRAVY (calculated)

-0.561

Length

999 amino acids

Sequence
(BLAST)

001: MYSRLIRRNQ RLSCFVLKQD KCLARPPTRD FTGSPSYRLA NTLTNHFTRK HPSCFPIASG NSLCLSLNSQ LRRFSSDGDG AGEDNLSKEK TGKEKSVLGG
101: VNRFDSHAQL GKQDQIDWLN NEKLASESNK ESPFLNKRER LKNEFSRRIQ PWETIQLSFE SFPYYLHEHT KDTLVECVSS HIKQRNVAST YGSRLGSSSG
201: RILLQSVPGT ELYRERLVRA LARDSQVPLL ILDSSVLAPY DFADDYNEES ESDDEAAESD DETAESEADE ETDANNDEEG SSEAKVEGSD DEERYLEISK
301: EVLKKLGADI EDIEKRMSGQ LLGSSEVPKA IAVDHSDKAK RPLKKGDQVR YVGSAKKDEG KRRVVLGKIS TSDGQKSAFT VIPGRPLSKG QRGEVYEVSG
401: NRVAVIFDSG DNKTSEGSEE KPAEQPQTLP IHWVDAKELK LDMDMQAVDG YIAMEALNEV LGSNQPLIVY FPDFSQWLSR AVPKARRKEF VDKVQEMFDK
501: LSGPIVMMCG QNKIETGSKE KEKFTMVLPN FSQFAKLPLP LKRLTEGLTG SKRSEENEIY KLFTNVMRLH PPKEEDALGL FKKQLGEDRR IVISRSNINE
601: LLKVLEEHEL LCTDLFQVNT DGVILTKQKA EKVIGWARNH YLATCPEPLV KGGRLSLPRE SLEISIARLR KLEDNSLQPS QNLKDMAKDE YERNFVSAVV
701: APGEIGVKFE DIGALENVKK ALNELVILPM RRPELFSRGN LLRPCKGILL FGPPGTGKTL LAKALATEAG ANFISITGST LTSKWFGDAE KLTKALFSYA
801: TKLAPVIIFV DEIDSLLGAR GGSSEHEATR RMRNEFMAAW DGLRSKDSQR ILILGATNRP FDLDDAVIRR LPRRIYVDLP DAENRLKILQ IFLTPENLEP
901: GFQFEKLAKE TEGYSGSDLK NLCIAAAYRP VQELLQEEQK GEGADASPCL RPLSLDDFIQ SKAKVSPSVA YDATTMNELR KWNEQYGEGG SRTKSPFGF

Best Arabidopsis Sequence Match ( AT1G50140.3 )
(BLAST)

0001: MYTRTIRRNQ RWGFVLQQDK CLVRPVIRDH TGSQSYRSTT SILTDHLRRN HHSHGAIASR DYLSYSWNSQ LRRFSSEGDG NNASEDSRFP LNKDKMGKEK
0101: STVGVEHFDS HAQLGVQDQI EWLNNEKRAS ESRKESPFLN KRERLKNEFL RRIQPWETIQ LSWESFPYYV HEHTKDTLVE CVSSHIKQKS MTSKYGARLD
0201: SSSGRILLQS VPGTELYRER LVRALARDTQ VPLLVLDSSV LAPYDFADDY NEESESDDDI AESDQCTSQS EAEEETDGDN DDTSSSETKI EGTDDEERYL
0301: EISKEVLKKL GADIEDIEKR MSEQLYGSSE VSEAAAVDQD DKAKRPLKKG DQVKYVGSPK KDEAKHRVVL GKISTSDGQK SAFTVIPGRP LSSGQRGEVY
0401: EVIGNRVAVI FEYGDDKTSE GSEKKPAEQP QMLPIHWLDV KDLKYDLDMQ AVDGYIAMEA LNEVLQSIQP LIVYFPDSTQ WLSRAVPKTR RKEFVDKVKE
0501: MFDKLSGPIV MICGQNKIET GSKEREKFTM VLPNLSRVVK LPLPLKGLTE GFTGRGKSEE NEIYKLFTNV MRLHPPKEED TLRLFKKQLG EDRRIVISRS
0601: NINELLKALE EHELLCTDLY QVNTDGVILT KQKAEKAIGW AKNHYLASCP VPLVKGGRLS LPRESLEISI ARLRKLEDNS LKPSQNLKNI AKDEYERNFV
0701: SAVVAPGEIG VKFEDIGALE DVKKALNELV ILPMRRPELF ARGNLLRPCK GILLFGPPGT GKTLLAKALA TEAGANFISI TGSTLTSKWF GDAEKLTKAL
0801: FSFATKLAPV IIFVDEIDSL LGARGGSSEH EATRRMRNEF MAAWDGLRSK DSQRILILGA TNRPFDLDDA VIRRLPRRIY VDLPDAENRL KILKIFLTPE
0901: NLESDFQFEK LAKETEGYSG SDLKNLCIAA AYRPVQELLQ EEQKGARAEA SPGLRSLSLD DFIQSKAKVS PSVAYDATTM NELRKWNEQY GEGGSRTKSP
1001: FGF

Arabidopsis Description

p-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I4Y6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.