CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052248_P009	Maize	mitochondrion	96.05	96.05
Os02t0749150-01	Rice	mitochondrion	25.03	92.16
TraesCS6D01G284600.1	Wheat	mitochondrion	83.79	84.13
TraesCS6B01G333700.1	Wheat	mitochondrion	82.67	83.35
TraesCS6A01G305500.1	Wheat	mitochondrion	82.98	83.32
HORVU6Hr1G075440.6	Barley	mitochondrion	82.88	82.96
OQU76102	Sorghum	mitochondrion	75.18	76.65
CDY24618	Canola	endoplasmic reticulum	17.83	62.63
VIT_01s0011g02220.t01	Wine grape	cytosol, mitochondrion, plastid	62.61	61.8
GSMUA_Achr7P07310_001	Banana	mitochondrion	63.22	59.49
Solyc02g014350.2.1	Tomato	mitochondrion	59.47	58.88
KRH29161	Soybean	cytosol, mitochondrion	61.8	58.77
AT3G19740.1	Thale cress	cytosol, mitochondrion, plastid	58.97	58.61
KRH24190	Soybean	mitochondrion	61.2	58.13
AT1G50140.1	Thale cress	mitochondrion	58.36	57.43
Bra014239.1-P	Field mustard	mitochondrion	57.95	57.26
CDY03591	Canola	cytosol, mitochondrion, plastid	57.95	57.26
CDY45052	Canola	mitochondrion	57.95	57.26
Bra038230.1-P	Field mustard	cytosol, mitochondrion, plastid	56.74	56.45
CDY33415	Canola	cytosol, mitochondrion	57.24	55.61
CDY42204	Canola	cytosol, mitochondrion, plastid	56.74	53.79
KXG20883	Sorghum	endoplasmic reticulum	14.49	36.57
EES01499	Sorghum	cytosol	12.87	33.33
EES00021	Sorghum	endoplasmic reticulum	28.37	33.06
OQU87315	Sorghum	cytosol	13.07	32.01
KXG32842	Sorghum	cytosol	24.92	31.74
EES20020	Sorghum	endoplasmic reticulum	27.05	31.71
KXG32925	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	25.84	30.72
EES16128	Sorghum	cytosol, plastid	28.47	30.15
EER87773	Sorghum	cytosol	14.59	29.39
OQU79278	Sorghum	cytosol, plastid	25.94	27.77
EES00346	Sorghum	cytosol	12.16	27.52
EER92288	Sorghum	cytosol	30.4	27.03
OQU90457	Sorghum	cytosol, plastid	29.69	26.78
KXG29076	Sorghum	plastid	33.03	26.4
EES01274	Sorghum	cytosol	13.58	25.82
KXG19781	Sorghum	cytosol	13.48	25.0
KXG23422	Sorghum	nucleus	15.7	22.53

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	EntrezGene:8075705	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	UniProt:C5XYR9	EnsemblPlants:EES05524	ProteinID:EES05524	ProteinID:EES05524.2	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0008150	GO:GO:0008152
GO:GO:0016722	GO:GO:0055114	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074
PANTHER:PTHR23074:SF95	SMART:SM00382	EnsemblPlantsGene:SORBI_3004G236400	SUPFAM:SSF52540	unigene:Sbi.18491	UniParc:UPI0007F2A5D5
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:58418228..58429297

Molecular Weight (calculated)

110045.0 Da

IEP (calculated)

5.804

GRAVY (calculated)

-0.497

Length

987 amino acids

Sequence
(BLAST)

001: MYHAMRLRCL LLRPPMWSNS SSLGISATGV SGGSFVRRFS ALGAPRPPGP ARRLCRFYGS KGGVGSAEAR GAAAASAAAG SSGRCFEQEH ARLGEKDQQE
101: WLSGERFLTG CKRRESTFLT RRERFRSEFL RRVVPWEKGS LSWQNFPYYV NENARQLLSE CVASHLRHKG VTSEYGSRLE SSGGRILLQS SPGTELYRER
201: FVRALAHELQ VPLLVLDSSV LAPYDYGEDY SESEEEDEHA ESEDEGSESE MEDDGDEDWT SNNGKSGESD DEDALKSVED LKKSVDDLKK LVPCTIEEFA
301: KRIVGAEEIT ASESSETPES SEEEKRPFKR GDRVKYVGAS GVVEADQRII LGKIPTQDGS RSAYTFISAR GLSNGQRGEV YEVNGDQVAV IFDPSIEKSH
401: DAHEDVTSKE ENGTATVYWV DSQDIAHDHD TESDDWHIAL EALCEVLPSL QPIIVYFPDS SQWLSRAVSK SDRKEFVQRV EKMFDRLTGP VVLICGQNIL
501: AAAPKDKEHP ALMFHNLSRL SSLPSPLKRL VGGLKGERYS RSGDISKLFT NSLTVPLPEE DEQLRVFNNQ IEEDRKIMIS RHNLVKLHKV LEEHDLSCVD
601: ILHVKSDGIV LTKQKAEKVV GWARNHYLSS TDLPSIKGDR LIIPRESLDI AIERLKEQGI TTKKSSQNLK VLAKDEYERN FISAVVPPNE IGVKFDDIGA
701: LEDVKRTLDE LVTLPMRRPE LFSHGNLLRP CKGVLLFGPP GTGKTLLAKA LATEAGANFI SITGSTLTSK WFGDAEKLTK ALFSFASRLA PVIIFVDEVD
801: SLLGARGGAF EHEATRRMRN EFMAAWDGLR SKESQRILIL GATNRPFDLD DAVIRRLPRR IYVDLPDAQN RMKILKILLA KEKLESDFKF DELANATEGY
901: SGSDLKNLCV AAAYRPVHEL LEEEKKGCVS NGNSYLRPLK LDDFIQAKAK VSSSVSYDAT SMNELRKWNE QYGEGGSRTK SPFGFGN

Best Arabidopsis Sequence Match ( AT3G19740.1 )
(BLAST)

001: MYTRALKRNQ RWGLVLQQAK YLVRPVVRDY TVSRYCGFTN KLTNSENLTR KSLLGSFSPR GGTIASGNHL SILKNSQLRS FSSEGDGRNA SEDKHISLNK
101: ENGVDDGKTG KEKSNNGVGH LDSHAQLGEQ DQIEWLNNEK LASECKKKES PFVNRRERFK NEFLRRIQPW EKIQLSWETF PYYIHDHTKD ILVECVTSHI
201: RQKNAASIYG ARLDSSSGRI LLQSVPGTEL YRERLVRALA RDVQVPLLVL DSSVLAPYDF ADDYNEESES DGENAEAEAD ESTTESDAEE DSSAQSEEDS
301: EAKADGSDSE EACLEVSEEA IKKIVPKLEE FEKLVAEELH GEACEAAAVE HSDKARRPAK KGDRVKYVGP SKKADAKHRP LSSGQRGEVY EVNGNRVAVI
401: FDIGGDTSSE GGDKKSTEHS HKLHMHWIDV GDLKHDLDMQ AEDGYIALEA LSEVLHSTQP LIVYFPDSSQ WLSRAVPKSK QNEFVDKVQE MFDKLSSPVV
501: MICGRNKIET GSKEREKFTM ILPNFGRLAK LPLPLKRLTE GLTGRKTSED NEIYKLFTNV MNLVPPKEEE NLIVFNKQLG EDRRIVMSRS NLNELLKALE
601: ENELLCTDLY QVNTDGVILT KQRAEKVIGW ARNHYLSSCP SPSIKEGRLI LPRESIEISV KRLKAQEDIS RKPTQNLKNI AKDEFETNFV SAVVAPGEIG
701: VKFDDIGALE HVKKTLNELV ILPMRRPELF TRGNLLRPCK GILLFGPPGT GKTLLAKALA TEAGANFISI TGSTLTSKWF GDAEKLTKAL FSFASKLAPV
801: IIFVDEVDSL LGARGGAFEH EATRRMRNEF MAAWDGLRSK DSQRILILGA TNRPFDLDDA VIRRLPRRIY VDLPDAENRL KILKIFLTPE NLETGFEFDK
901: LAKETEGYSG SDLKNLCIAA AYRPVQELLQ EENKDSVTNA SPDLRPLSLD DFIQSKAKVS PSVAYDATTM NELRKWNEQY GEGGTRTKSP FGF

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JCC9]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.