CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014239.1-P	Field mustard	mitochondrion	99.6	99.6
CDY03591	Canola	cytosol, mitochondrion, plastid	97.7	97.7
AT1G50140.1	Thale cress	mitochondrion	86.59	86.24
Os02t0749150-01	Rice	mitochondrion	21.92	81.72
Os06t0225900-01	Rice	cytosol	28.73	78.2
HORVU6Hr1G038660.1	Barley	cytosol, mitochondrion	13.61	76.4
CDY33415	Canola	cytosol, mitochondrion	72.47	71.26
HORVU4Hr1G059020.1	Barley	cytosol, endoplasmic reticulum	17.12	70.95
CDY42204	Canola	cytosol, mitochondrion, plastid	72.37	69.45
HORVU4Hr1G059040.2	Barley	cytosol	17.52	69.44
CDY24618	Canola	endoplasmic reticulum	19.32	68.68
HORVU3Hr1G072480.2	Barley	cytosol	16.92	67.06
HORVU5Hr1G104980.1	Barley	endoplasmic reticulum, mitochondrion	18.72	65.38
VIT_01s0011g02220.t01	Wine grape	cytosol, mitochondrion, plastid	63.66	63.6
Solyc02g014350.2.1	Tomato	mitochondrion	63.16	63.29
KRH29161	Soybean	cytosol, mitochondrion	63.36	60.98
KRH24190	Soybean	mitochondrion	63.16	60.73
EES05524	Sorghum	plastid	57.26	57.95
Zm00001d052248_P009	Maize	mitochondrion	57.06	57.75
TraesCS6D01G284600.1	Wheat	mitochondrion	56.76	57.68
TraesCS7D01G186200.1	Wheat	mitochondrion	55.96	57.51
TraesCS7A01G184700.1	Wheat	mitochondrion	55.86	57.47
TraesCS6B01G333700.1	Wheat	mitochondrion	56.26	57.41
TraesCS6A01G305500.1	Wheat	mitochondrion	56.46	57.38
TraesCS7B01G089500.1	Wheat	mitochondrion	55.86	57.35
HORVU6Hr1G075440.6	Barley	mitochondrion	56.16	56.9
OQU76102	Sorghum	mitochondrion	55.06	56.82
GSMUA_Achr7P07310_001	Banana	mitochondrion	59.66	56.82
HORVU7Hr1G037870.1	Barley	plastid	55.56	53.42
CDY71574	Canola	endoplasmic reticulum, plasma membrane	15.62	39.8
CDY19035	Canola	endoplasmic reticulum	15.62	39.8
CDX92836	Canola	endoplasmic reticulum, plasma membrane	15.52	39.64
CDY29857	Canola	endoplasmic reticulum, plasma membrane	15.52	39.64
CDY30236	Canola	endoplasmic reticulum	15.52	39.54
CDY55344	Canola	endoplasmic reticulum	15.52	39.54
CDX92656	Canola	cytosol	16.62	38.52
CDY38752	Canola	endoplasmic reticulum	14.31	37.05
CDY14372	Canola	endoplasmic reticulum	14.51	36.52
CDY18925	Canola	plastid	13.11	36.19
CDY20251	Canola	endoplasmic reticulum	14.41	35.82
CDY47077	Canola	endoplasmic reticulum, plasma membrane	13.81	35.48
CDX96166	Canola	cytosol	23.32	34.32
CDX84641	Canola	cytosol	12.81	34.13
CDX79566	Canola	cytosol	12.71	33.78
CDY17260	Canola	cytosol	12.91	33.68
CDX84306	Canola	cytosol	12.91	33.42
CDY49165	Canola	extracellular, plasma membrane	26.03	33.29
CDY56163	Canola	extracellular, vacuole	26.53	32.92
CDY51824	Canola	extracellular, plasma membrane	26.53	32.88
CDY19639	Canola	extracellular, vacuole	26.03	32.38
CDY08360	Canola	endoplasmic reticulum	26.73	32.13
CDY38192	Canola	plasma membrane	26.63	32.01
CDX93578	Canola	cytosol	13.21	30.7
CDX95077	Canola	cytosol	13.21	30.63
CDX74745	Canola	cytosol	14.31	30.11
CDY31186	Canola	cytosol	12.91	29.72
CDY04504	Canola	cytosol	12.81	29.63
CDX71438	Canola	cytosol	12.71	29.6
CDX83275	Canola	cytosol	12.81	29.56
CDX89214	Canola	extracellular, plasma membrane	22.02	29.02
CDX91317	Canola	plastid	30.73	29.02
CDY37046	Canola	cytosol	14.71	28.77
CDX90936	Canola	plastid	31.43	28.7
CDY32485	Canola	plastid	31.43	28.49
CDX92857	Canola	endoplasmic reticulum, extracellular, plasma membrane	20.02	28.41
CDY29873	Canola	endoplasmic reticulum, extracellular, plasma membrane	19.62	27.96
CDX97266	Canola	plastid	31.63	27.94
CDX89933	Canola	plastid	31.43	27.16
CDY19014	Canola	endoplasmic reticulum, extracellular	19.42	27.02
CDY38662	Canola	cytosol	13.81	26.74
CDY37590	Canola	cytosol	13.61	26.61
CDY18018	Canola	plastid	32.13	26.31
CDY50381	Canola	plastid	31.63	26.31
CDY18129	Canola	cytosol, plastid	31.73	26.11
CDY57698	Canola	cytosol	13.81	25.99
CDX79393	Canola	cytosol	13.71	25.9
CDY22053	Canola	plastid	31.63	25.71
CDY28494	Canola	plastid	15.92	24.54
CDY34176	Canola	plastid	15.72	24.23
CDY27380	Canola	nucleus	14.41	19.41
CDX89934	Canola	cytosol	0.3	1.15

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078I4V5	UniProt:A0A078I4V5	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	EnsemblPlants:CDY45052	ProteinID:CDY45052	ProteinID:CDY45052.1	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:GSBRNA2T00081309001	InterPro:P-loop_NTPase
PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF95	SMART:SM00382	SUPFAM:SSF52540
UniParc:UPI0004EED6B7	SEG:seg	:	:	:	:

Description

BnaA08g02230DBnaA08g02230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I4V5]

Coordinates

chrLK032612:-:45806..53785

Molecular Weight (calculated)

111879.0 Da

IEP (calculated)

6.081

GRAVY (calculated)

-0.562

Length

999 amino acids

Sequence
(BLAST)

001: MYSRLIRRNQ RLSCFVLKQD KCLARPPTRD FTGSPSYRLA NTLTNHFTRK HPSCFPIASG NSLCLSLNSQ LRRFSSDGDG AGEDNLSKEK TGKEKSVLGG
101: VNRFDSHAQL GKQDQIDWLN NEKLASESKK DSPFLNKRER LKNEFSRRIQ PWETIQLSFE SFPYYLHEHT KDTLVECVTS HIKQRNVAST YGSRLGSSSG
201: RILLQSVPGT ELYRERLVRA LARDSQVPLL ILDSSVLAPY DFADDYNEES ESDDEAAESD DETAESEAEE ETDANNDEEG SSEAKVEGSD DEERYLEISK
301: EVLKKLGADI EDIEKRMSGQ LLGSSEVPKA IAVDHSDKAK RPLKKGDQVR YVGSAKKDEG KRRVVLGKIS TSDGQKSAFT VIPGRPLSKG QRGEVYEVSG
401: NRVAVIFDSG DNKTSEGSEE KPAEQPQTLP IHWVDAKELK LDMDMQAVDG YIAMEALNEV LGSNQPLIVY FPDFSQWLSR AVPKARRKEF VDKVQEMFDK
501: LSGPIVMMCG QNKIETGSKE KEKFTMVLPN FSQFAKLPLP LKRLTEGLTG SKRSEENEIY KLFTNVMRLH PPKEEDALGL FKKQLGEDRR IVISRSNINE
601: LLKVLEEHEL LCTDLFQVNT DGVILTKQKA EKVIGWARNH YLATCPEPLV KGGRLSLPRE SLEISIARLR KLEDNSLQPS QNLKDMAKDE YERNFVSAVV
701: APGEIGVKFE DIGALENVKK ALNELVILPM RRPELFSRGN LLRPCKGILL FGPPGTGKTL LAKALATEAG ANFISITGST LTSKWFGDAE KLTKALFSYA
801: TKLAPVIIFV DEIDSLLGAR GGSSEHEATR RMRNEFMAAW DGLRSKDSQR ILILGATNRP FDLDDAVIRR LPRRIYVDLP DAENRLKILQ IFLTPENLEP
901: GFQFEKLAKE TEGYSGSDLK NLCIAAAYRP VQELLQEEQK GEGADASPCL RPLSLDDFIQ SKAKVSPSVA YDATTMNELR KWNEQYGEGG SRTKSPFGF

Best Arabidopsis Sequence Match ( AT1G50140.3 )
(BLAST)

0001: MYTRTIRRNQ RWGFVLQQDK CLVRPVIRDH TGSQSYRSTT SILTDHLRRN HHSHGAIASR DYLSYSWNSQ LRRFSSEGDG NNASEDSRFP LNKDKMGKEK
0101: STVGVEHFDS HAQLGVQDQI EWLNNEKRAS ESRKESPFLN KRERLKNEFL RRIQPWETIQ LSWESFPYYV HEHTKDTLVE CVSSHIKQKS MTSKYGARLD
0201: SSSGRILLQS VPGTELYRER LVRALARDTQ VPLLVLDSSV LAPYDFADDY NEESESDDDI AESDQCTSQS EAEEETDGDN DDTSSSETKI EGTDDEERYL
0301: EISKEVLKKL GADIEDIEKR MSEQLYGSSE VSEAAAVDQD DKAKRPLKKG DQVKYVGSPK KDEAKHRVVL GKISTSDGQK SAFTVIPGRP LSSGQRGEVY
0401: EVIGNRVAVI FEYGDDKTSE GSEKKPAEQP QMLPIHWLDV KDLKYDLDMQ AVDGYIAMEA LNEVLQSIQP LIVYFPDSTQ WLSRAVPKTR RKEFVDKVKE
0501: MFDKLSGPIV MICGQNKIET GSKEREKFTM VLPNLSRVVK LPLPLKGLTE GFTGRGKSEE NEIYKLFTNV MRLHPPKEED TLRLFKKQLG EDRRIVISRS
0601: NINELLKALE EHELLCTDLY QVNTDGVILT KQKAEKAIGW AKNHYLASCP VPLVKGGRLS LPRESLEISI ARLRKLEDNS LKPSQNLKNI AKDEYERNFV
0701: SAVVAPGEIG VKFEDIGALE DVKKALNELV ILPMRRPELF ARGNLLRPCK GILLFGPPGT GKTLLAKALA TEAGANFISI TGSTLTSKWF GDAEKLTKAL
0801: FSFATKLAPV IIFVDEIDSL LGARGGSSEH EATRRMRNEF MAAWDGLRSK DSQRILILGA TNRPFDLDDA VIRRLPRRIY VDLPDAENRL KILKIFLTPE
0901: NLESDFQFEK LAKETEGYSG SDLKNLCIAA AYRPVQELLQ EEQKGARAEA SPGLRSLSLD DFIQSKAKVS PSVAYDATTM NELRKWNEQY GEGGSRTKSP
1001: FGF

Arabidopsis Description

p-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I4Y6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.