Factsheet for VIT_01s0011g02220.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0225900-01	Rice	cytosol	30.3	82.56
Os02t0749150-01	Rice	mitochondrion	21.8	81.34
HORVU6Hr1G038660.1	Barley	cytosol, mitochondrion	13.8	77.53
HORVU4Hr1G059020.1	Barley	cytosol, endoplasmic reticulum	17.5	72.61
HORVU4Hr1G059040.2	Barley	cytosol	18.0	71.43
HORVU3Hr1G072480.2	Barley	cytosol	17.6	69.84
Solyc02g014350.2.1	Tomato	mitochondrion	69.1	69.31
CDY24618	Canola	endoplasmic reticulum	19.2	68.33
KRH24190	Soybean	mitochondrion	70.9	68.24
KRH29161	Soybean	cytosol, mitochondrion	70.8	68.21
HORVU5Hr1G104980.1	Barley	endoplasmic reticulum, mitochondrion	19.4	67.83
AT3G19740.1	Thale cress	cytosol, mitochondrion, plastid	66.0	66.47
AT1G50140.1	Thale cress	mitochondrion	65.2	65.0
CDY45052	Canola	mitochondrion	63.6	63.66
OQU76102	Sorghum	mitochondrion	61.6	63.64
Bra014239.1-P	Field mustard	mitochondrion	63.5	63.56
CDY03591	Canola	cytosol, mitochondrion, plastid	63.5	63.56
Bra038230.1-P	Field mustard	cytosol, mitochondrion, plastid	62.6	63.1
GSMUA_Achr7P07310_001	Banana	mitochondrion	66.1	63.01
EES05524	Sorghum	plastid	61.8	62.61
Zm00001d052248_P009	Maize	mitochondrion	61.6	62.41
CDY33415	Canola	cytosol, mitochondrion	63.1	62.11
TraesCS6D01G284600.1	Wheat	mitochondrion	61.0	62.05
TraesCS6A01G305500.1	Wheat	mitochondrion	60.9	61.95
TraesCS6B01G333700.1	Wheat	mitochondrion	60.5	61.8
TraesCS7A01G184700.1	Wheat	mitochondrion	60.0	61.79
TraesCS7D01G186200.1	Wheat	mitochondrion	60.0	61.73
HORVU6Hr1G075440.6	Barley	mitochondrion	60.7	61.56
TraesCS7B01G089500.1	Wheat	mitochondrion	59.6	61.25
CDY42204	Canola	cytosol, mitochondrion, plastid	62.9	60.42
HORVU7Hr1G037870.1	Barley	plastid	59.9	57.65
VIT_16s0050g01830.t01	Wine grape	endoplasmic reticulum, vacuole	27.0	34.53
VIT_16s0050g01850.t01	Wine grape	endoplasmic reticulum, vacuole	28.6	34.17
VIT_16s0050g01840.t01	Wine grape	cytosol, golgi, plasma membrane	27.3	34.0
VIT_02s0025g00650.t01	Wine grape	endoplasmic reticulum, vacuole	28.2	33.73
VIT_10s0003g03500.t01	Wine grape	cytosol	12.4	31.23
VIT_15s0048g01720.t01	Wine grape	cytosol	15.2	30.96
VIT_06s0080g00160.t01	Wine grape	extracellular	12.4	28.64
VIT_13s0106g00490.t01	Wine grape	cytosol	12.4	28.57
VIT_17s0000g01550.t01	Wine grape	cytosol, plastid	33.4	27.47
VIT_07s0005g00200.t01	Wine grape	plastid	33.3	25.87
VIT_09s0002g05260.t01	Wine grape	cytosol	13.4	25.72
VIT_14s0068g02130.t01	Wine grape	nucleus	15.3	22.9
VIT_16s0098g01260.t01	Wine grape	endoplasmic reticulum	16.1	20.85

Protein Annotations

Gene3D:1.10.8.60	EntrezGene:100252512	wikigene:100252512	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	ProteinID:CCB50984	ProteinID:CCB50984.1	UniProt:F6HF44	EMBL:FN595752
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0016787	GO:GO:0016887	EntrezGene:LOC100252512
wikigene:LOC100252512	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF95
SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000210A13B	ArrayExpress:VIT_01s0011g02220	EnsemblPlantsGene:VIT_01s0011g02220	EnsemblPlants:VIT_01s0011g02220.t01
unigene:Vvi.6282	RefSeq:XP_002277238	RefSeq:XP_002277238.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr1:+:1932534..1958536

Molecular Weight (calculated)

111951.0 Da

IEP (calculated)

5.780

GRAVY (calculated)

-0.460

Length

1000 amino acids

Sequence
(BLAST)

001: MFSRSLCSRT LAGNCSLCDN LIRRYLSDSL LTQGVAAGNS NVRLHGSFNV SLRSSQLRFY SSEGDGRNAS EDEHIPVKDG ANLDKGKTKR KVREAVRHCD
101: EHIRLGEQDQ KEWLNNEKLA IESRKKESPF LSRREKLKNE FLRRVVPWEK ITVSWETFPY HIPDHTKNLL VECAASHLKH KKFTVSYGAR LTSSSGRILL
201: QSVPGTELYR ERLVRALARD LQVPLLVLDS SILASYDFAE GCSSECESDD DNLESCEDCI SESEIEDESD SNDEEEWTSS GEVKSDASDN DDVQASAEAL
301: KKLVPHKLKK FEQRVAAELE ISSESSTSEA VESSDKPKWS LKKGDRVKYV GPSIDIEADN RVILGKIPTC DGPTNAYTIF RGRPLSSGQR GEVYEVNGDR
401: VAVILDRSEK KPNEGEEDEK LIDQAEKPSV YWMQVKDIEY DLDTEGEDRY IAMEALCEVL HSTQPLIVYF PDSSQWLLRA VSKPNQKEFV CRVQEMFDQL
501: SGPVVLICGQ NKTEAGSKER EKFTMLVPGL GRLAKLPVPL KQLTEGLKAT KTSENNEILK LFSNVICIDT PKDEELLRTF NKQVEEDRRI IISRSNLNEL
601: HKVLEEHQLS CMDLLHVNTD GVILTKQKAE KIVGWAKNHY LSSCMLPSIK GERLSVPRES LEIAVLRLKV QEAISRKPSH SLKNLAKDEY ESNFVSAVVP
701: PGEIGVKFDD IGALEDVKKA LNELVILPMR RPELFSHGNL LRPCKGILLF GPPGTGKTLL AKALATEAGA NFISVTGSNL TSKWFGDAEK LTKALFSFAG
801: KLAPVIIFVD EVDSLLGARG GAFEHEATRK MRNEFMAAWD GLRSKDNQRI IILGATNRPF DLDEAVIRRL PRRIYVDLPD AENRMKILRI FLASENIEPG
901: FQFDKLANAT EGYSGSDLKN LCVAAAYRPV QELLEEEQKG GGDILPPVLR SLTLDDFIKS KAKVGPSVAF DAASMNELRK WNEQYGEGGS RRKSLFGFGN

Best Arabidopsis Sequence Match ( AT3G19740.1 )
(BLAST)

001: MYTRALKRNQ RWGLVLQQAK YLVRPVVRDY TVSRYCGFTN KLTNSENLTR KSLLGSFSPR GGTIASGNHL SILKNSQLRS FSSEGDGRNA SEDKHISLNK
101: ENGVDDGKTG KEKSNNGVGH LDSHAQLGEQ DQIEWLNNEK LASECKKKES PFVNRRERFK NEFLRRIQPW EKIQLSWETF PYYIHDHTKD ILVECVTSHI
201: RQKNAASIYG ARLDSSSGRI LLQSVPGTEL YRERLVRALA RDVQVPLLVL DSSVLAPYDF ADDYNEESES DGENAEAEAD ESTTESDAEE DSSAQSEEDS
301: EAKADGSDSE EACLEVSEEA IKKIVPKLEE FEKLVAEELH GEACEAAAVE HSDKARRPAK KGDRVKYVGP SKKADAKHRP LSSGQRGEVY EVNGNRVAVI
401: FDIGGDTSSE GGDKKSTEHS HKLHMHWIDV GDLKHDLDMQ AEDGYIALEA LSEVLHSTQP LIVYFPDSSQ WLSRAVPKSK QNEFVDKVQE MFDKLSSPVV
501: MICGRNKIET GSKEREKFTM ILPNFGRLAK LPLPLKRLTE GLTGRKTSED NEIYKLFTNV MNLVPPKEEE NLIVFNKQLG EDRRIVMSRS NLNELLKALE
601: ENELLCTDLY QVNTDGVILT KQRAEKVIGW ARNHYLSSCP SPSIKEGRLI LPRESIEISV KRLKAQEDIS RKPTQNLKNI AKDEFETNFV SAVVAPGEIG
701: VKFDDIGALE HVKKTLNELV ILPMRRPELF TRGNLLRPCK GILLFGPPGT GKTLLAKALA TEAGANFISI TGSTLTSKWF GDAEKLTKAL FSFASKLAPV
801: IIFVDEVDSL LGARGGAFEH EATRRMRNEF MAAWDGLRSK DSQRILILGA TNRPFDLDDA VIRRLPRRIY VDLPDAENRL KILKIFLTPE NLETGFEFDK
901: LAKETEGYSG SDLKNLCIAA AYRPVQELLQ EENKDSVTNA SPDLRPLSLD DFIQSKAKVS PSVAYDATTM NELRKWNEQY GEGGTRTKSP FGF

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JCC9]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.