Factsheet for Solyc02g014350.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0749150-01	Rice	mitochondrion	21.06	78.36
Os06t0225900-01	Rice	cytosol	28.49	77.38
HORVU6Hr1G038660.1	Barley	cytosol, mitochondrion	12.84	71.91
VIT_01s0011g02220.t01	Wine grape	cytosol, mitochondrion, plastid	69.31	69.1
HORVU4Hr1G059020.1	Barley	cytosol, endoplasmic reticulum	16.25	67.22
HORVU4Hr1G059040.2	Barley	cytosol	16.55	65.48
AT3G19740.1	Thale cress	cytosol, mitochondrion, plastid	64.69	64.95
KRH29161	Soybean	cytosol, mitochondrion	67.5	64.84
KRH24190	Soybean	mitochondrion	67.5	64.77
CDY24618	Canola	endoplasmic reticulum	18.25	64.77
HORVU3Hr1G072480.2	Barley	cytosol	16.15	63.89
AT1G50140.1	Thale cress	mitochondrion	63.89	63.51
Bra038230.1-P	Field mustard	cytosol, mitochondrion, plastid	62.89	63.21
CDY45052	Canola	mitochondrion	63.29	63.16
CDY03591	Canola	cytosol, mitochondrion, plastid	63.19	63.06
Bra014239.1-P	Field mustard	mitochondrion	63.19	63.06
CDY33415	Canola	cytosol, mitochondrion	63.39	62.2
CDY42204	Canola	cytosol, mitochondrion, plastid	63.29	60.61
HORVU5Hr1G104980.1	Barley	endoplasmic reticulum, mitochondrion	17.35	60.49
GSMUA_Achr7P07310_001	Banana	mitochondrion	63.19	60.06
OQU76102	Sorghum	mitochondrion	57.77	59.5
EES05524	Sorghum	plastid	58.88	59.47
TraesCS6D01G284600.1	Wheat	mitochondrion	58.48	59.31
TraesCS6B01G333700.1	Wheat	mitochondrion	58.07	59.14
HORVU6Hr1G075440.6	Barley	mitochondrion	58.07	58.72
Zm00001d052248_P009	Maize	mitochondrion	57.97	58.56
TraesCS6A01G305500.1	Wheat	mitochondrion	57.67	58.49
TraesCS7B01G089500.1	Wheat	mitochondrion	56.87	58.27
TraesCS7D01G186200.1	Wheat	mitochondrion	56.77	58.23
TraesCS7A01G184700.1	Wheat	mitochondrion	56.47	57.98
HORVU7Hr1G037870.1	Barley	plastid	56.97	54.67
Solyc08g083020.2.1	Tomato	plastid	14.24	39.55
Solyc06g053160.2.1	Tomato	endoplasmic reticulum, plasma membrane	15.55	39.54
Solyc03g082630.2.1	Tomato	endoplasmic reticulum	14.64	38.73
Solyc06g071980.2.1	Tomato	cytosol	27.58	36.18
Solyc11g013570.1.1	Tomato	cytosol	10.23	33.66
Solyc03g007760.2.1	Tomato	endoplasmic reticulum	26.08	31.48
Solyc02g070440.2.1	Tomato	cytosol	12.14	31.35
Solyc08g081740.2.1	Tomato	unclear	25.68	30.62
Solyc01g094150.2.1	Tomato	nucleus	14.74	29.94
Solyc11g007170.1.1	Tomato	cytosol	11.84	29.21
Solyc11g067230.1.1	Tomato	cytosol	12.34	28.47
Solyc11g067240.1.1	Tomato	plastid	12.34	28.47
Solyc06g072000.1.1	Tomato	plastid	29.29	28.43
Solyc11g013700.1.1	Tomato	cytosol	10.83	27.27
Solyc11g013650.1.1	Tomato	cytosol	9.53	26.99
Solyc03g110900.2.1	Tomato	nucleus	31.29	26.11
Solyc11g050800.1.1	Tomato	cytosol	8.22	26.03
Solyc09g074950.2.1	Tomato	plastid	32.1	25.87
Solyc06g084530.2.1	Tomato	extracellular, nucleus	32.0	25.5
Solyc06g066810.2.1	Tomato	cytosol	13.24	25.48
Solyc10g019190.1.1	Tomato	cytosol	8.83	24.79
Solyc02g094100.2.1	Tomato	nucleus	16.15	24.1
Solyc11g050880.1.1	Tomato	cytosol	11.43	22.57
Solyc12g040520.1.1	Tomato	cytosol	11.84	22.22

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0016787	GO:GO:0016887	UniProt:K4B4N4
InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF95	SMART:SM00382
SUPFAM:SSF52540	EnsemblPlantsGene:Solyc02g014350.2	EnsemblPlants:Solyc02g014350.2.1	UniParc:UPI0002768268	SEG:seg	:

Description

No Description!

Coordinates

chr2:+:15788893..15812957

Molecular Weight (calculated)

112744.0 Da

IEP (calculated)

5.735

GRAVY (calculated)

-0.539

Length

997 amino acids

Sequence
(BLAST)

001: MYVRRIRSNN QRWNLVFQRF NHYVSSGYRT YSPTQSSIVT QIPLDCNSLG CVIGRALLDT SKSIHTASQR GNIRLLRSSP ASWRWTHLRY FSSKGDGRDA
101: SEDKHVHTRD GTSSDKGTVR KEKSGQDVRH CDAHTQLGEQ EQKEWLRNEK LSIESKKKES PFLSRRERFK NEFLRRIAPW EKIALSWDTF PYYIHDHTKN
201: VLMECVASHL MHKKVTVAYG GRLSSSSGRI MLQSIPGTEL YRERLVRTLA RDLEVPLLVL DSSILAPYDF GEDCSSESES DVESGEECTS DSEIEDANDA
301: SNEEEWTSSA ETKSEASEED DVEASVEALE KLIPFNLEDF EKRVSGELES SSESTQDVVD QSEKAQRPFK KGDRVKYTGP SGVVKADNRS MSSGQRGEIY
401: EVNGEQVAVI FDVSEKQTME EEEDEIPKAQ DVKPSIYWIP ANEIEHDLDA QAEDCYIAME VLCEVLKFAQ PIIVYFPDSS LWLSRAVSKA NRKEFVHKVQ
501: EMFDQLSGPI VLICGRNKVE TGSKEKEKFT MILPNLGRLA KLPLSLKRLT EGLRATKRSV DDDIHKLFSN VMSIHPPKEE DLLKTFNKQI EEDRRIVIAR
601: SNLNELYKVL EEHELSCTDL LHVNTDDVIL TKQKAEKVIG WAKNHYLYTC VHPSIKGDRL YLPRESVETA ILRMKEQETM SKKPSQNLKN LAKDEYENNF
701: VSAVVPQGEI GVKFDDIGAL EEVKKALNEL VILPMRRPEL FSHGNLLRPC KGILLFGPPG TGKTLVAKAL ATEAGANFIS ITGSTLTSKW FGDAEKLTKA
801: LFSFASKLSP VIIFVDEVDS LLGARGGSFE HEATRRMRNE FMAAWDGLRS KENQKILILG ATNRPFDLDD AVIRRLPRRI YVDLPDAANR LKILKIILAR
901: ENLESEFPYE NLANATDGYS GSDLKNLCIA AAYRPVQEIL EEEKEPESLG SRKDGIPVLR PLTVDDFIQS KAKVGPSVAY DAASMNELRK WNDQYGX

Best Arabidopsis Sequence Match ( AT3G19740.1 )
(BLAST)

001: MYTRALKRNQ RWGLVLQQAK YLVRPVVRDY TVSRYCGFTN KLTNSENLTR KSLLGSFSPR GGTIASGNHL SILKNSQLRS FSSEGDGRNA SEDKHISLNK
101: ENGVDDGKTG KEKSNNGVGH LDSHAQLGEQ DQIEWLNNEK LASECKKKES PFVNRRERFK NEFLRRIQPW EKIQLSWETF PYYIHDHTKD ILVECVTSHI
201: RQKNAASIYG ARLDSSSGRI LLQSVPGTEL YRERLVRALA RDVQVPLLVL DSSVLAPYDF ADDYNEESES DGENAEAEAD ESTTESDAEE DSSAQSEEDS
301: EAKADGSDSE EACLEVSEEA IKKIVPKLEE FEKLVAEELH GEACEAAAVE HSDKARRPAK KGDRVKYVGP SKKADAKHRP LSSGQRGEVY EVNGNRVAVI
401: FDIGGDTSSE GGDKKSTEHS HKLHMHWIDV GDLKHDLDMQ AEDGYIALEA LSEVLHSTQP LIVYFPDSSQ WLSRAVPKSK QNEFVDKVQE MFDKLSSPVV
501: MICGRNKIET GSKEREKFTM ILPNFGRLAK LPLPLKRLTE GLTGRKTSED NEIYKLFTNV MNLVPPKEEE NLIVFNKQLG EDRRIVMSRS NLNELLKALE
601: ENELLCTDLY QVNTDGVILT KQRAEKVIGW ARNHYLSSCP SPSIKEGRLI LPRESIEISV KRLKAQEDIS RKPTQNLKNI AKDEFETNFV SAVVAPGEIG
701: VKFDDIGALE HVKKTLNELV ILPMRRPELF TRGNLLRPCK GILLFGPPGT GKTLLAKALA TEAGANFISI TGSTLTSKWF GDAEKLTKAL FSFASKLAPV
801: IIFVDEVDSL LGARGGAFEH EATRRMRNEF MAAWDGLRSK DSQRILILGA TNRPFDLDDA VIRRLPRRIY VDLPDAENRL KILKIFLTPE NLETGFEFDK
901: LAKETEGYSG SDLKNLCIAA AYRPVQELLQ EENKDSVTNA SPDLRPLSLD DFIQSKAKVS PSVAYDATTM NELRKWNEQY GEGGTRTKSP FGF

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JCC9]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.