Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
28394025
extracellular: 29876421 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0661400-01 | Rice | cytosol | 16.63 | 86.31 |
| Solyc09g074950.2.1 | Tomato | plastid | 80.34 | 81.24 |
| Zm00001d029385_P001 | Maize | cytosol | 12.23 | 80.1 |
| Zm00001d049686_P001 | Maize | plastid | 13.75 | 71.97 |
| KRH71560 | Soybean | nucleus | 69.06 | 69.51 |
| VIT_07s0005g00200.t01 | Wine grape | plastid | 71.3 | 69.31 |
| KRH71559 | Soybean | cytosol | 61.23 | 69.26 |
| KRH31895 | Soybean | nucleus | 68.82 | 69.05 |
| KRH31896 | Soybean | nucleus | 66.19 | 67.54 |
| GSMUA_Achr11P... | Banana | cytosol | 37.57 | 66.67 |
| TraesCS1B01G120800.1 | Wheat | cytosol | 13.35 | 66.01 |
| CDX90936 | Canola | plastid | 56.91 | 65.08 |
| CDX91317 | Canola | plastid | 54.92 | 64.93 |
| CDY32485 | Canola | plastid | 56.83 | 64.52 |
| GSMUA_Achr8P33760_001 | Banana | cytosol | 56.59 | 64.13 |
| CDX97266 | Canola | plastid | 57.95 | 64.1 |
| CDX89933 | Canola | plastid | 58.27 | 63.06 |
| Solyc06g071980.2.1 | Tomato | cytosol | 38.13 | 62.76 |
| CDY22053 | Canola | plastid | 61.47 | 62.57 |
| Bra000878.1-P | Field mustard | plastid | 62.59 | 62.54 |
| CDY18129 | Canola | cytosol, plastid | 60.43 | 62.27 |
| Bra018548.1-P | Field mustard | plastid | 60.67 | 62.26 |
| GSMUA_Achr3P00740_001 | Banana | mitochondrion | 57.07 | 62.25 |
| AT4G02480.1 | Thale cress | plastid | 62.83 | 62.13 |
| AT1G02890.1 | Thale cress | plastid | 61.63 | 61.88 |
| CDY18018 | Canola | plastid | 60.27 | 61.8 |
| CDY50381 | Canola | plastid | 59.23 | 61.7 |
| Os03t0344700-01 | Rice | cytosol | 38.21 | 61.68 |
| GSMUA_Achr11P... | Banana | cytosol | 44.12 | 61.4 |
| GSMUA_Achr8P10090_001 | Banana | cytosol | 53.0 | 60.99 |
| Bra036265.1-P | Field mustard | plastid | 62.59 | 60.7 |
| Bra032579.1-P | Field mustard | plastid | 55.24 | 60.24 |
| HORVU7Hr1G026880.14 | Barley | cytosol | 22.06 | 59.35 |
| KXG29076 | Sorghum | plastid | 57.39 | 58.14 |
| TraesCS4A01G169300.15 | Wheat | plastid | 56.75 | 57.58 |
| TraesCS4D01G145100.12 | Wheat | plastid | 55.96 | 57.0 |
| Solyc03g110900.2.1 | Tomato | nucleus | 54.44 | 56.99 |
| TraesCS4B01G126300.7 | Wheat | nucleus | 56.99 | 56.68 |
| Zm00001d007698_P002 | Maize | plastid | 56.91 | 56.24 |
| Zm00001d048689_P004 | Maize | plastid | 56.12 | 55.98 |
| HORVU4Hr1G033300.1 | Barley | cytosol | 56.83 | 54.9 |
| TraesCS7B01G028300.1 | Wheat | cytosol | 34.53 | 54.75 |
| EES16128 | Sorghum | cytosol, plastid | 40.61 | 54.51 |
| Zm00001d007139_P007 | Maize | cytosol, plastid | 45.4 | 53.74 |
| HORVU2Hr1G019730.5 | Barley | cytosol, plastid | 44.6 | 53.14 |
| Os07t0672500-02 | Rice | cytosol, plastid | 45.8 | 53.01 |
| OQU90457 | Sorghum | cytosol, plastid | 46.04 | 52.65 |
| TraesCS4B01G155600.1 | Wheat | cytosol | 45.88 | 52.18 |
| TraesCS4A01G142800.3 | Wheat | cytosol | 45.8 | 52.14 |
| TraesCS2A01G113900.1 | Wheat | cytosol | 45.88 | 52.13 |
| Solyc06g072000.1.1 | Tomato | plastid | 42.77 | 52.09 |
| TraesCS4D01G168600.1 | Wheat | cytosol | 45.96 | 51.94 |
| TraesCS2B01G132900.3 | Wheat | cytosol, plastid | 45.48 | 51.73 |
| Bra033356.1-P | Field mustard | cytosol, plastid | 60.51 | 50.77 |
| EER92288 | Sorghum | cytosol | 44.84 | 50.54 |
| TraesCS2D01G114500.1 | Wheat | cytosol, plastid | 45.8 | 50.53 |
| HORVU4Hr1G046420.6 | Barley | cytosol, plastid | 45.96 | 49.78 |
| TraesCS7D01G127200.1 | Wheat | cytosol | 38.93 | 49.29 |
| TraesCS7A01G128400.2 | Wheat | cytosol, plastid | 39.81 | 49.11 |
| Zm00001d029120_P004 | Maize | cytosol | 44.2 | 49.11 |
| Zm00001d047494_P007 | Maize | cytosol | 43.25 | 48.91 |
| OQU79278 | Sorghum | cytosol, plastid | 34.93 | 47.4 |
| Solyc03g082630.2.1 | Tomato | endoplasmic reticulum | 13.19 | 43.77 |
| Solyc08g083020.2.1 | Tomato | plastid | 12.39 | 43.18 |
| Solyc06g053160.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 13.35 | 42.6 |
| Solyc03g007760.2.1 | Tomato | endoplasmic reticulum | 27.42 | 41.53 |
| Solyc08g081740.2.1 | Tomato | unclear | 27.18 | 40.67 |
| Solyc11g013570.1.1 | Tomato | cytosol | 8.39 | 34.65 |
| Solyc02g070440.2.1 | Tomato | cytosol | 10.55 | 34.2 |
| Solyc02g014350.2.1 | Tomato | mitochondrion | 25.5 | 32.0 |
| Solyc01g094150.2.1 | Tomato | nucleus | 12.31 | 31.36 |
| Solyc11g007170.1.1 | Tomato | cytosol | 9.67 | 29.95 |
| Solyc11g013700.1.1 | Tomato | cytosol | 9.35 | 29.55 |
| Solyc10g019190.1.1 | Tomato | cytosol | 8.15 | 28.73 |
| Solyc11g067240.1.1 | Tomato | plastid | 9.75 | 28.24 |
| Solyc11g067230.1.1 | Tomato | cytosol | 9.75 | 28.24 |
| Solyc11g013650.1.1 | Tomato | cytosol | 7.91 | 28.12 |
| Solyc11g050800.1.1 | Tomato | cytosol | 7.03 | 27.94 |
| Solyc06g066810.2.1 | Tomato | cytosol | 11.43 | 27.61 |
| Solyc11g050880.1.1 | Tomato | cytosol | 10.63 | 26.34 |
| Solyc12g040520.1.1 | Tomato | cytosol | 10.87 | 25.61 |
| Solyc02g094100.2.1 | Tomato | nucleus | 13.51 | 25.3 |
| CDX89934 | Canola | cytosol | 0.32 | 1.53 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:2.30.30.750 | Gene3D:2.60.200.20 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase |
| InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | InterPro:FHA_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR000253 | UniProt:K4CAV8 | InterPro:P-loop_NTPase |
| PFAM:PF00004 | PFAM:PF00498 | ScanProsite:PS00674 | PANTHER:PTHR23074 | PANTHER:PTHR23074:SF70 | SMART:SM00382 |
| InterPro:SMAD_FHA_dom_sf | SUPFAM:SSF49879 | SUPFAM:SSF52540 | EnsemblPlantsGene:Solyc06g084530.2 | EnsemblPlants:Solyc06g084530.2.1 | UniParc:UPI000276BBB4 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:49613153..49631388
Molecular Weight (calculated)
136572.0 Da
IEP (calculated)
7.465
GRAVY (calculated)
-0.359
Length
1251 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVETRRGSSS SKRPLSSPSS PLPNGKRSKA VEALSSTNDT IGQKTQGAVN ESGQESAEQE VRSADLSGAS VLKSSDASLP LKSPENQVKG EPLVSPITLG
0101: HSVINAEKVK LNGSTLNRGK KRQLKSNVGA AWGKLISQCS QNPHVVMHHP TYSVGQGRQC DLWIGDPSVS KSLCNLKHIE QEKGGFITLL EITGKKGDVQ
0201: VNGKVYPKNS TVPLNDGDEM VFGSSGDHAY IFEKITNDNK SCLPRQVSIL EAHSGSVKGL HIEARSGDPS TVAVASTLAS LSNFQKESSL LSPSSQNGKD
0301: LQQSSELPRL PAADGVSDKH DLDAEMKDAS NLSNLPGVSL CEKTGVISPD SGNEKLNLDN GALDSVDAEI GKISGVAQEL RPLLRVLAGS SEFDLSGSIS
0401: KILEDRRGIR ELLRDLDPPI LTSTRRQAFK DALQQGILDS KSIEVSFENF PYYLSETTKN VLISSTYVHL KCHKFIKYAP DLPTLCPRIL LSGPAGSEIY
0501: QETLAKALAK YFGVRLLIVD SLLLPGGSIA KDIDSVKESS KPERASVFAK RAAQVAALHL NKKPASSVEA DITGGSTVSS HAQPKQEAST ASSKNYTFKK
0601: GDRVKYVGPL QSGFSPLQAP LRGPTYGYRG KVVLAFEDNE SSKIGIRFDR SIPEGNDLGG RCEEDHGFFC AADFLRLDSS NSDDIDKLAI DELFEVASKE
0701: SKISALVLFV KDIEKSMVGN PEAYAAFKIK LEHLPENVIV IASHTQTDSR KEKSHPGGLL FTKFGSNQTA LLDLAFPDSF GRLHDRSKET PKTMKQLTRL
0801: FPNKVTIQLP QDEALLSDWK QQLERDIGTL KSQSNIVSIR NVLNRIGIDC PDLETLCIKD QALTSESVEK IIGWALSHHF MHKTESPVEE VKLVISSASI
0901: SYGVNIFQGI HNETKSLKKS LKDVVTENDF EKRLLADVIP PSDIGVTFCD IGALENVKDT LKELVMLPLQ RPELFCKGQL TKPCKGILLF GPPGTGKTML
1001: AKAVATEAGA NFINISMSSI TSKWFGEGEK YVKAVFSLAS KIAPSVVFVD EVDSMLGRRE NPGEHEAMRK MKNEFMVNWD GLRTKDKERV LVLAATNRPF
1101: DLDEAVIRRL PRRLMVNLPD APNREKILRV ILAKEELTPN VDLEAIANMT EGYSGSDLKN LCVTAAHCPI REILEKEKKE KALAVSDSRP VPALHSSVDV
1201: RPLNKDDFKY AHEQVCASVS SESANMNELL QWNELYGEGG SRKKKSLSYF M
0101: HSVINAEKVK LNGSTLNRGK KRQLKSNVGA AWGKLISQCS QNPHVVMHHP TYSVGQGRQC DLWIGDPSVS KSLCNLKHIE QEKGGFITLL EITGKKGDVQ
0201: VNGKVYPKNS TVPLNDGDEM VFGSSGDHAY IFEKITNDNK SCLPRQVSIL EAHSGSVKGL HIEARSGDPS TVAVASTLAS LSNFQKESSL LSPSSQNGKD
0301: LQQSSELPRL PAADGVSDKH DLDAEMKDAS NLSNLPGVSL CEKTGVISPD SGNEKLNLDN GALDSVDAEI GKISGVAQEL RPLLRVLAGS SEFDLSGSIS
0401: KILEDRRGIR ELLRDLDPPI LTSTRRQAFK DALQQGILDS KSIEVSFENF PYYLSETTKN VLISSTYVHL KCHKFIKYAP DLPTLCPRIL LSGPAGSEIY
0501: QETLAKALAK YFGVRLLIVD SLLLPGGSIA KDIDSVKESS KPERASVFAK RAAQVAALHL NKKPASSVEA DITGGSTVSS HAQPKQEAST ASSKNYTFKK
0601: GDRVKYVGPL QSGFSPLQAP LRGPTYGYRG KVVLAFEDNE SSKIGIRFDR SIPEGNDLGG RCEEDHGFFC AADFLRLDSS NSDDIDKLAI DELFEVASKE
0701: SKISALVLFV KDIEKSMVGN PEAYAAFKIK LEHLPENVIV IASHTQTDSR KEKSHPGGLL FTKFGSNQTA LLDLAFPDSF GRLHDRSKET PKTMKQLTRL
0801: FPNKVTIQLP QDEALLSDWK QQLERDIGTL KSQSNIVSIR NVLNRIGIDC PDLETLCIKD QALTSESVEK IIGWALSHHF MHKTESPVEE VKLVISSASI
0901: SYGVNIFQGI HNETKSLKKS LKDVVTENDF EKRLLADVIP PSDIGVTFCD IGALENVKDT LKELVMLPLQ RPELFCKGQL TKPCKGILLF GPPGTGKTML
1001: AKAVATEAGA NFINISMSSI TSKWFGEGEK YVKAVFSLAS KIAPSVVFVD EVDSMLGRRE NPGEHEAMRK MKNEFMVNWD GLRTKDKERV LVLAATNRPF
1101: DLDEAVIRRL PRRLMVNLPD APNREKILRV ILAKEELTPN VDLEAIANMT EGYSGSDLKN LCVTAAHCPI REILEKEKKE KALAVSDSRP VPALHSSVDV
1201: RPLNKDDFKY AHEQVCASVS SESANMNELL QWNELYGEGG SRKKKSLSYF M
0001: MVETRRSSSA SKRFCASSSS PEASSSQRPN KRSKVKIDAA ASSLEPATAE PAGSSSASEV PIENQGPASD PGSESGEPEL GSSDPQAMDA EKPVVTTDVP
0101: VMENSPETDA NPEVEVLATP TVAGEAVADA DKSKAAKKRA LKAPWAKLLS QYSQNPHRVI RGPVFTVGRR GCDLSIRDQA MPSTLCELKQ SEHGGPSVAS
0201: LEILGNGVIV HVNGKCYQKS TCVHLRGGDE VIFSLNGKHA YIFQPVKDEN LAAPDRASSL SICEARGAPL KGVHVETRAG DVDGASDVDG ASILASLSKL
0301: RSFHLLPPIA KAGKRQQNPA VPVVPSSFND CISDTDMNDA DSNNDHAAVA SVEKIAAAST PGTANENLNV DGSGLDPFQE ADGGNVPAAG YEIRPIVHLL
0401: GESSSFDIRG SISRLLDERR EVKEFLREFD LSSTISTRRQ AFKDSLRGGV LNAQNIDISF ENFPYYLSAT TKGVLMISMY VHMNGGSKYA NFATDLTTAC
0501: PRILLSGPSG SEIYQEMLAK ALAKQFGAKL MIVDSLLLPG GSPAREAESS KEGSRRERLS MLAKRAVQAA QVLQHKKPTS SVDADITGGS TLSSQALPKQ
0601: EVSTATSKSY TFKAGDRVKF VGPSASAISS LQGQLRGPAI GSQGKVALAF EDNCASKIGI RFDRPVQDGN DLGGLCEEDH GFFCAASSLR LEGSSSDDAD
0701: KLAVNEIFEV ALSESEGGSL ILFLKDIEKS LVGNSDVYAT LKSKLETLPE NIVVIASQTQ LDSRKEKSHP GGFLFTKFGG NQTALLDLAF PDNFGKLHDR
0801: SKETPKSMKQ ITRLFPNKIA IQLPQEEALL SDWKEKLDRD TEILKVQANI TSILAVLAKN KLDCPDLGTL CIKDQTLPSE SVEKVVGWAF GHHLMICTEP
0901: IVKDNKLVIS AESISYGLQT LHDIQNENKS LKKSLKDVVT ENEFEKKLLS DVIPPSDIGV SFDDIGALEN VKETLKELVM LPLQRPELFD KGQLTKPTKG
1001: ILLFGPPGTG KTMLAKAVAT EAGANFINIS MSSITSKWFG EGEKYVKAVF SLASKIAPSV IFVDEVDSML GRRENPGEHE AMRKMKNEFM VNWDGLRTKD
1101: RERVLVLAAT NRPFDLDEAV IRRLPRRLMV NLPDATNRSK ILSVILAKEE IAPDVDLEAI ANMTDGYSGS DLKNLCVTAA HFPIREILEK EKKEKTAAQA
1201: ENRPTPPLYS CTDVRSLTMN DFKAAHDQVC ASVSSDSSNM NELQQWNELY GEGGSRKKTS LSYFM
0101: VMENSPETDA NPEVEVLATP TVAGEAVADA DKSKAAKKRA LKAPWAKLLS QYSQNPHRVI RGPVFTVGRR GCDLSIRDQA MPSTLCELKQ SEHGGPSVAS
0201: LEILGNGVIV HVNGKCYQKS TCVHLRGGDE VIFSLNGKHA YIFQPVKDEN LAAPDRASSL SICEARGAPL KGVHVETRAG DVDGASDVDG ASILASLSKL
0301: RSFHLLPPIA KAGKRQQNPA VPVVPSSFND CISDTDMNDA DSNNDHAAVA SVEKIAAAST PGTANENLNV DGSGLDPFQE ADGGNVPAAG YEIRPIVHLL
0401: GESSSFDIRG SISRLLDERR EVKEFLREFD LSSTISTRRQ AFKDSLRGGV LNAQNIDISF ENFPYYLSAT TKGVLMISMY VHMNGGSKYA NFATDLTTAC
0501: PRILLSGPSG SEIYQEMLAK ALAKQFGAKL MIVDSLLLPG GSPAREAESS KEGSRRERLS MLAKRAVQAA QVLQHKKPTS SVDADITGGS TLSSQALPKQ
0601: EVSTATSKSY TFKAGDRVKF VGPSASAISS LQGQLRGPAI GSQGKVALAF EDNCASKIGI RFDRPVQDGN DLGGLCEEDH GFFCAASSLR LEGSSSDDAD
0701: KLAVNEIFEV ALSESEGGSL ILFLKDIEKS LVGNSDVYAT LKSKLETLPE NIVVIASQTQ LDSRKEKSHP GGFLFTKFGG NQTALLDLAF PDNFGKLHDR
0801: SKETPKSMKQ ITRLFPNKIA IQLPQEEALL SDWKEKLDRD TEILKVQANI TSILAVLAKN KLDCPDLGTL CIKDQTLPSE SVEKVVGWAF GHHLMICTEP
0901: IVKDNKLVIS AESISYGLQT LHDIQNENKS LKKSLKDVVT ENEFEKKLLS DVIPPSDIGV SFDDIGALEN VKETLKELVM LPLQRPELFD KGQLTKPTKG
1001: ILLFGPPGTG KTMLAKAVAT EAGANFINIS MSSITSKWFG EGEKYVKAVF SLASKIAPSV IFVDEVDSML GRRENPGEHE AMRKMKNEFM VNWDGLRTKD
1101: RERVLVLAAT NRPFDLDEAV IRRLPRRLMV NLPDATNRSK ILSVILAKEE IAPDVDLEAI ANMTDGYSGS DLKNLCVTAA HFPIREILEK EKKEKTAAQA
1201: ENRPTPPLYS CTDVRSLTMN DFKAAHDQVC ASVSSDSSNM NELQQWNELY GEGGSRKKTS LSYFM
Arabidopsis Description
AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WM93]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.