Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0661400-01 | Rice | cytosol | 18.5 | 96.27 |
| KXG29076 | Sorghum | plastid | 91.95 | 93.36 |
| Zm00001d007698_P002 | Maize | plastid | 90.35 | 89.49 |
| Zm00001d029385_P001 | Maize | cytosol | 13.4 | 87.96 |
| TraesCS4A01G169300.15 | Wheat | plastid | 82.7 | 84.1 |
| TraesCS4D01G145100.12 | Wheat | plastid | 80.7 | 82.41 |
| TraesCS4B01G126300.7 | Wheat | nucleus | 82.46 | 82.19 |
| HORVU4Hr1G033300.1 | Barley | cytosol | 81.9 | 79.31 |
| Zm00001d049686_P001 | Maize | plastid | 14.51 | 76.15 |
| GSMUA_Achr8P33760_001 | Banana | cytosol | 59.09 | 67.12 |
| GSMUA_Achr3P00740_001 | Banana | mitochondrion | 58.85 | 64.34 |
| KRH71559 | Soybean | cytosol | 51.67 | 58.59 |
| CDX91317 | Canola | plastid | 48.41 | 57.37 |
| Solyc09g074950.2.1 | Tomato | plastid | 56.46 | 57.24 |
| VIT_07s0005g00200.t01 | Wine grape | plastid | 57.97 | 56.49 |
| CDY32485 | Canola | plastid | 49.6 | 56.44 |
| KRH31895 | Soybean | nucleus | 56.06 | 56.38 |
| KRH71560 | Soybean | nucleus | 55.74 | 56.23 |
| CDX90936 | Canola | plastid | 48.96 | 56.12 |
| Solyc06g084530.2.1 | Tomato | extracellular, nucleus | 55.98 | 56.12 |
| CDX97266 | Canola | plastid | 50.32 | 55.79 |
| KRH31896 | Soybean | nucleus | 54.31 | 55.55 |
| CDX89933 | Canola | plastid | 51.04 | 55.36 |
| CDY18129 | Canola | cytosol, plastid | 52.63 | 54.37 |
| Zm00001d007139_P007 | Maize | cytosol, plastid | 45.37 | 53.83 |
| Bra018548.1-P | Field mustard | plastid | 52.07 | 53.57 |
| AT1G02890.1 | Thale cress | plastid | 52.63 | 52.97 |
| CDY22053 | Canola | plastid | 51.75 | 52.81 |
| Bra000878.1-P | Field mustard | plastid | 52.71 | 52.8 |
| CDY18018 | Canola | plastid | 51.36 | 52.79 |
| CDY50381 | Canola | plastid | 50.4 | 52.62 |
| AT4G02480.1 | Thale cress | plastid | 52.71 | 52.25 |
| Bra032579.1-P | Field mustard | plastid | 47.53 | 51.96 |
| Bra036265.1-P | Field mustard | plastid | 52.79 | 51.32 |
| Zm00001d029120_P004 | Maize | cytosol | 43.94 | 48.93 |
| Zm00001d047494_P007 | Maize | cytosol | 42.66 | 48.37 |
| Bra033356.1-P | Field mustard | cytosol, plastid | 52.79 | 44.4 |
| Zm00001d014775_P002 | Maize | plastid | 13.24 | 42.46 |
| Zm00001d009702_P001 | Maize | endoplasmic reticulum | 26.32 | 39.15 |
| Zm00001d039315_P003 | Maize | vacuole | 25.76 | 38.41 |
| Zm00001d008983_P001 | Maize | vacuole | 25.6 | 37.94 |
| Zm00001d036410_P002 | Maize | plastid | 14.19 | 37.4 |
| Zm00001d052248_P009 | Maize | mitochondrion | 24.96 | 31.71 |
| Zm00001d043410_P002 | Maize | cytosol | 10.45 | 31.57 |
| Zm00001d045483_P002 | Maize | cytosol | 11.96 | 30.12 |
| Zm00001d039904_P006 | Maize | cytosol | 10.29 | 29.66 |
| Zm00001d008596_P005 | Maize | cytosol | 10.37 | 28.57 |
| Zm00001d011611_P005 | Maize | cytosol | 11.32 | 27.52 |
| Zm00001d041083_P005 | Maize | nucleus | 13.96 | 25.81 |
| Zm00001d011563_P019 | Maize | mitochondrion | 10.53 | 25.14 |
| Zm00001d043841_P003 | Maize | cytosol | 11.4 | 15.82 |
| CDX89934 | Canola | cytosol | 0.32 | 1.53 |
Protein Annotations
| Gene3D:1.10.8.60 | EntrezGene:103652718 | Gene3D:2.60.200.20 | Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A1D6PNJ3 |
| InterPro:AAA+_ATPase | ProteinID:AQK48443.1 | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | ncoils:Coil | InterPro:FHA_dom |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | InterPro:IPR000253 |
| InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF00498 | ScanProsite:PS00674 | PANTHER:PTHR23074 | PANTHER:PTHR23074:SF70 |
| SMART:SM00382 | InterPro:SMAD_FHA_dom_sf | SUPFAM:SSF49879 | SUPFAM:SSF52540 | UniParc:UPI000842D93E | EnsemblPlantsGene:Zm00001d048689 |
| EnsemblPlants:Zm00001d048689_P004 | EnsemblPlants:Zm00001d048689_T004 | SEG:seg | : | : | : |
Description
AAA-type ATPase family protein
Coordinates
chr4:+:3334725..3345872
Molecular Weight (calculated)
137109.0 Da
IEP (calculated)
7.532
GRAVY (calculated)
-0.390
Length
1254 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVETRRSSAA AAGKRTSPSP SSSSVPPPKR SKAESSGSPT ASAPGRAEED SVAGAAPARS AGSVDDAAAV AQKDQGVDKP SSAAAESSKR RKEQEQQQPA
0101: VPWAKLLSEC SQTPHYPISV DQISVGQSKN CNLWLKDQPV SKVLCKLRRL EQGGPCELEV IGKKGMVQLN GRSVSPGTKV PLTGGDEVIF SSCGKHTYIF
0201: LYPLNDKVPK TVLSSAVSLL EAPVASVKRI RTDKRTGDTS AVAGTEMMTS TSNQKDVAAV PPASAGENSQ RVVRPLASSA SDKLKGRAVS PEKEFANGEN
0301: ANEVNSNIED SPMVVAAAPI SPDAAANDTC QQNGFVSDSH LGAEIGKTAT YKIRPVLRMI TGSTISEFDL TGDDLFKALE DQRDHIIREL NASTNVPPSR
0401: CQAFKDGMKQ GIINPSDIDV TFENFPYYLS ENTKNVLLSS AFIHLKKKEF IKQFVEISSI NQRILLSGPA GSEIYQETLV KALAKHFSAR LLVVDSLLLP
0501: GAPSKDPEFQ KDVGKADKSG DKAAAEKFAI YQKHRSSLAD TVHFRRPAAP TSSVNADIVG TSTLHSASLP KQESSTATSK SYTFREGFVI GCVMWVQLNH
0601: ARCHKGTLIA NIIPAIRFIQ CLLLRGPSYG YRGRVMLAFE DNGSSKIGVR FDKQIPDGND LGGLCEEDHG FFCSAELLRP DFSAGEEVER LAMTELIEVI
0701: SEENKSGPLI VLLKDVEKSF TGVTESLSSL RSKLESLPPG VLIIGSHTQM DSRKEKAHPG GFLFTKFASS SQTLFDLFPD SFGSRLHERS KESPKTMKHL
0801: NKLFPNKILI QLPQDEALLT DWKQQLDRDV ETLKAKSNIG SIRMFLSRNG IECNDLEELF IKDQSLSNEN VDKIVGYAVS YHLNQNKIET SKDAKLVLTT
0901: ESLKHGLNML QSMQNDNKSS KKSLKDVVTE NEFEKRLLAD VIPPNDIGVT FDDIGALENV KDTLKELVML PLQRPELFCK GQLTKPCKGI LLFGPPGTGK
1001: TMLAKAVATE AGANFINISM SSITSKWFGE GEKYVKAVFS LASKIAPSVI FIDEVDSMLG RRENPGEHEA MRKMKNEFMV NWDGLRTKDK ERVLVLGATN
1101: RPFDLDEAVI RRFPRRLMVN LPDASNREKI LKVILAKEEL GSDVDMDSLA NMTDGYSGSD LKNLCVTAAH YPIREILEKE KKEKNLAKTE GRPEPALYGS
1201: EDIRPLSIDD FKSAHEQVCA SVSSDSANMN ELLQWNDLYG EGGSRKKKAL SYFM
0101: VPWAKLLSEC SQTPHYPISV DQISVGQSKN CNLWLKDQPV SKVLCKLRRL EQGGPCELEV IGKKGMVQLN GRSVSPGTKV PLTGGDEVIF SSCGKHTYIF
0201: LYPLNDKVPK TVLSSAVSLL EAPVASVKRI RTDKRTGDTS AVAGTEMMTS TSNQKDVAAV PPASAGENSQ RVVRPLASSA SDKLKGRAVS PEKEFANGEN
0301: ANEVNSNIED SPMVVAAAPI SPDAAANDTC QQNGFVSDSH LGAEIGKTAT YKIRPVLRMI TGSTISEFDL TGDDLFKALE DQRDHIIREL NASTNVPPSR
0401: CQAFKDGMKQ GIINPSDIDV TFENFPYYLS ENTKNVLLSS AFIHLKKKEF IKQFVEISSI NQRILLSGPA GSEIYQETLV KALAKHFSAR LLVVDSLLLP
0501: GAPSKDPEFQ KDVGKADKSG DKAAAEKFAI YQKHRSSLAD TVHFRRPAAP TSSVNADIVG TSTLHSASLP KQESSTATSK SYTFREGFVI GCVMWVQLNH
0601: ARCHKGTLIA NIIPAIRFIQ CLLLRGPSYG YRGRVMLAFE DNGSSKIGVR FDKQIPDGND LGGLCEEDHG FFCSAELLRP DFSAGEEVER LAMTELIEVI
0701: SEENKSGPLI VLLKDVEKSF TGVTESLSSL RSKLESLPPG VLIIGSHTQM DSRKEKAHPG GFLFTKFASS SQTLFDLFPD SFGSRLHERS KESPKTMKHL
0801: NKLFPNKILI QLPQDEALLT DWKQQLDRDV ETLKAKSNIG SIRMFLSRNG IECNDLEELF IKDQSLSNEN VDKIVGYAVS YHLNQNKIET SKDAKLVLTT
0901: ESLKHGLNML QSMQNDNKSS KKSLKDVVTE NEFEKRLLAD VIPPNDIGVT FDDIGALENV KDTLKELVML PLQRPELFCK GQLTKPCKGI LLFGPPGTGK
1001: TMLAKAVATE AGANFINISM SSITSKWFGE GEKYVKAVFS LASKIAPSVI FIDEVDSMLG RRENPGEHEA MRKMKNEFMV NWDGLRTKDK ERVLVLGATN
1101: RPFDLDEAVI RRFPRRLMVN LPDASNREKI LKVILAKEEL GSDVDMDSLA NMTDGYSGSD LKNLCVTAAH YPIREILEKE KKEKNLAKTE GRPEPALYGS
1201: EDIRPLSIDD FKSAHEQVCA SVSSDSANMN ELLQWNDLYG EGGSRKKKAL SYFM
0001: MVSPGRSDST SGENNNPPDG SSGKRSPSSP ADKSPSKRQK LEDGGDTLPP SDSSKCVLGD TTPTSGDSQI DASAAAATTS QPPPVAQAIL QEKASFERWT
0101: YVHSRFENPW CRLLSQSAQY PSINIFLSVF KFLDGELSSY SFKITRIQRK GNVLAVLETM GNNGHMWING NYAEGNINHV LNSGDEVVYQ QMPIVAAKPG
0201: SVQVPAGKFL DLERMTGHSI ISSLERLIHA SSKSHQAPES MVQVDGMEGI FSVNNQDSKM EILDEKNEVT SNSQQASTSG NGLQSAIFRE AIQAGFVRGE
0301: NMEVSFKNFP YYLSEYTKAA LLYASYIHLK KKEYVQFVSD MTPMNPRILL SGPAGSEIYQ ETLAKALARD LEAKLLIFDS YPILGFTRGK FLHLHLFVYF
0401: PDYGYEITAL TAKEVESLRD GLASNKSCKL PNQSIELIDQ GKSSDLSAGG GVASSLSPAA SSDSDSQLQL EPETLPRSVN HTLKKGMPPL HCLQQKILLQ
0501: SSWISGLRIL HLEEKNTCRG PPNGTTGKVI LVFDENPSAK VGVRFDKPIP DGVDLGELCE SGHGFFCKAT DLPFKSSSFK DLVRLLVNTL FEVVHSESRT
0601: CPFILFLKDA EKSVAGNFDL YSAFQIRLEY LPENVIVICS QTHSDHLKVK DIGRQKKQGK EVPHATELLA ELFENKITIQ MPQDEKRLTL WKHQMDRDAE
0701: TSKVKSNFNH LRMVLRRRGL GCEGLETTWS RMCLKDLTLQ RDSVEKIIGW AFGNHISKNP DTDPAKVTLS RESIEFGIGL LQNDLKGSTS SKKDIVVENV
0801: FEKRLLSDVI LPSDIDVTFD DIGALEKVKD ILKELVMLPL QRPELFCKGE LTKPCKGILL FGPPGTGKTM LAKAVAKEAD ANFINISMSS ITSKWFGEGE
0901: KYVKAVFSLA SKMSPSVIFV DEVDSMLGRR EHPREHEASR KIKNEFMMHW DGLTTQERER VLVLAATNRP FDLDEAVIRR LPRRLMVGLP DTSNRAFILK
1001: VILAKEDLSP DLDIGEIASM TNGYSGSDLK NLCVTAAHRP IKEILEKEKR ERDAALAQGK VPPPLSGSSD LRALNVEDFR DAHKWVSASV SSESATMTAL
1101: QQWNKLHGEG GSGKQQSFSF YT
0101: YVHSRFENPW CRLLSQSAQY PSINIFLSVF KFLDGELSSY SFKITRIQRK GNVLAVLETM GNNGHMWING NYAEGNINHV LNSGDEVVYQ QMPIVAAKPG
0201: SVQVPAGKFL DLERMTGHSI ISSLERLIHA SSKSHQAPES MVQVDGMEGI FSVNNQDSKM EILDEKNEVT SNSQQASTSG NGLQSAIFRE AIQAGFVRGE
0301: NMEVSFKNFP YYLSEYTKAA LLYASYIHLK KKEYVQFVSD MTPMNPRILL SGPAGSEIYQ ETLAKALARD LEAKLLIFDS YPILGFTRGK FLHLHLFVYF
0401: PDYGYEITAL TAKEVESLRD GLASNKSCKL PNQSIELIDQ GKSSDLSAGG GVASSLSPAA SSDSDSQLQL EPETLPRSVN HTLKKGMPPL HCLQQKILLQ
0501: SSWISGLRIL HLEEKNTCRG PPNGTTGKVI LVFDENPSAK VGVRFDKPIP DGVDLGELCE SGHGFFCKAT DLPFKSSSFK DLVRLLVNTL FEVVHSESRT
0601: CPFILFLKDA EKSVAGNFDL YSAFQIRLEY LPENVIVICS QTHSDHLKVK DIGRQKKQGK EVPHATELLA ELFENKITIQ MPQDEKRLTL WKHQMDRDAE
0701: TSKVKSNFNH LRMVLRRRGL GCEGLETTWS RMCLKDLTLQ RDSVEKIIGW AFGNHISKNP DTDPAKVTLS RESIEFGIGL LQNDLKGSTS SKKDIVVENV
0801: FEKRLLSDVI LPSDIDVTFD DIGALEKVKD ILKELVMLPL QRPELFCKGE LTKPCKGILL FGPPGTGKTM LAKAVAKEAD ANFINISMSS ITSKWFGEGE
0901: KYVKAVFSLA SKMSPSVIFV DEVDSMLGRR EHPREHEASR KIKNEFMMHW DGLTTQERER VLVLAATNRP FDLDEAVIRR LPRRLMVGLP DTSNRAFILK
1001: VILAKEDLSP DLDIGEIASM TNGYSGSDLK NLCVTAAHRP IKEILEKEKR ERDAALAQGK VPPPLSGSSD LRALNVEDFR DAHKWVSASV SSESATMTAL
1101: QQWNKLHGEG GSGKQQSFSF YT
Arabidopsis Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JRR2]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.