Factsheet for Zm00001d052248_P009

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05524	Sorghum	plastid	96.05	96.05
Os02t0749150-01	Rice	mitochondrion	24.92	91.79
TraesCS6D01G284600.1	Wheat	mitochondrion	83.38	83.72
TraesCS6B01G333700.1	Wheat	mitochondrion	82.47	83.15
TraesCS6A01G305500.1	Wheat	mitochondrion	82.57	82.91
HORVU6Hr1G075440.6	Barley	mitochondrion	82.78	82.86
CDY24618	Canola	endoplasmic reticulum	17.63	61.92
VIT_01s0011g02220.t01	Wine grape	cytosol, mitochondrion, plastid	62.41	61.6
GSMUA_Achr7P07310_001	Banana	mitochondrion	62.41	58.72
KRH29161	Soybean	cytosol, mitochondrion	61.4	58.38
AT3G19740.1	Thale cress	cytosol, mitochondrion, plastid	58.46	58.11
Solyc02g014350.2.1	Tomato	mitochondrion	58.56	57.97
KRH24190	Soybean	mitochondrion	60.89	57.84
Zm00001d029385_P001	Maize	cytosol	11.14	57.59
AT1G50140.1	Thale cress	mitochondrion	58.46	57.53
CDY45052	Canola	mitochondrion	57.75	57.06
CDY03591	Canola	cytosol, mitochondrion, plastid	57.75	57.06
Bra014239.1-P	Field mustard	mitochondrion	57.75	57.06
Bra038230.1-P	Field mustard	cytosol, mitochondrion, plastid	56.43	56.15
CDY33415	Canola	cytosol, mitochondrion	57.04	55.41
CDY42204	Canola	cytosol, mitochondrion, plastid	56.43	53.51
Zm00001d049686_P001	Maize	plastid	12.16	50.21
Zm00001d014775_P002	Maize	plastid	14.79	37.34
Zm00001d039315_P003	Maize	vacuole	28.06	32.94
Zm00001d008983_P001	Maize	vacuole	28.06	32.74
Zm00001d009702_P001	Maize	endoplasmic reticulum	27.25	31.91
Zm00001d043410_P002	Maize	cytosol	12.87	30.6
Zm00001d036410_P002	Maize	plastid	14.69	30.46
Zm00001d045483_P002	Maize	cytosol	14.49	28.71
Zm00001d007139_P007	Maize	cytosol, plastid	29.38	27.44
Zm00001d039904_P006	Maize	cytosol	11.96	27.13
Zm00001d029120_P004	Maize	cytosol	30.5	26.73
Zm00001d047494_P007	Maize	cytosol	29.69	26.49
Zm00001d008596_P005	Maize	cytosol	12.06	26.15
Zm00001d011611_P005	Maize	cytosol	13.48	25.78
Zm00001d007698_P002	Maize	plastid	32.42	25.28
Zm00001d048689_P004	Maize	plastid	31.71	24.96
Zm00001d011563_P019	Maize	mitochondrion	13.17	24.76
Zm00001d041083_P005	Maize	nucleus	15.5	22.57
Zm00001d043841_P003	Maize	cytosol	13.58	14.82

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1D6QEJ7	InterPro:AAA+_ATPase	ProteinID:AQK56539.1
ProteinID:AQK56540.1	ProteinID:AQK56550.1	ProteinID:AQK56552.1	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	InterPro:P-loop_NTPase
PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF95	SMART:SM00382	SUPFAM:SSF52540
UniParc:UPI000844968F	EnsemblPlantsGene:Zm00001d052248	EnsemblPlants:Zm00001d052248_P009	EnsemblPlants:Zm00001d052248_T009	SEG:seg	:

Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein

Coordinates

chr4:-:184714057..184731493

Molecular Weight (calculated)

110405.0 Da

IEP (calculated)

5.670

GRAVY (calculated)

-0.526

Length

987 amino acids

Sequence
(BLAST)

001: MYHAMRLRCL LLHPPMWSNS SSLGISASGV SRGSFVRRFS ALGAPRPPGP ARRLCRFYGS KGGVGSAEAR GAAASPAAAG SSGRCFEQEH ARLGERDQQE
101: WLSGERFLTG CKRRESTFLT RRERFRREFL RRVVPWEKGS LSWQNFPYYV NDNARQLLSE CVASHLRHKS VTSEYGSRLE SSGGRILLQS SPGTELYRER
201: FVRALAHELQ VPLLVLDSSV LAPYDYGEDY SESEEEDEHA ESEDEGSESE MEDDGDEDWT SNNGKSGESD DEDALKSVED LKKSVDDLKK LVPCTIEEFA
301: KRIAGAEEST ASESSETPES PEEEKRPFQR GDRVKYVGTS AVVEADQRII LGKIPTQDGS RSAYTFISGR GLSNGQRGEV YEVNGDQVAV IFDPSIEKSH
401: NAHEDVTNKE ENGSATVYWV DSQDIAHDHD TESDDWHIAL EALCEVLPSL QPIIVYFPDS SQWLSRAVSK SDRREFVQRV EKMFDRLTGP VVLICGQNLL
501: AAAPKDKEQP ALMFHNLSRL SSLPSPLKRL VGGLKGERYS RSSDISKLFT NSLTVPLPEE DEQLQLFNNQ IEEDRKIMIS RHNLVKLHKV LEEHDLSCVE
601: LLDVKLDGIV LTKQKAEKAV GWARNHYLSS TTLPSIKGDR LIIPRESLDI SIERLKEQGI TAKKSSQNLK VLAKDEYERN FISAVVPPNE IGVKFDDIGA
701: LEDVKRTLDE LVTLPMRRPE LFSRGNLLRP CKGVLLFGPP GTGKTLLAKA LATEAGANFI SITGSTLTSK WFGDAEKLTK ALFSFATRLA PVIIFVDEVD
801: SLLGARGGAF EHEATRRMRN EFMAAWDGLR SKENQRILIL GATNRPFDLD DAVIRRLPRR IYVDLPDAQN RMKILKILLA KEKLESDFKF DELANATEGY
901: SGSDLKNLCV AAAYRPVHEL LEEEKKGRVS NENSYLRPLC LDDFIQAKAK VSSSVSYDAT SMNELRKWNE QYGEGGSRTK SPFGFGN

Best Arabidopsis Sequence Match ( AT1G50140.3 )
(BLAST)

0001: MYTRTIRRNQ RWGFVLQQDK CLVRPVIRDH TGSQSYRSTT SILTDHLRRN HHSHGAIASR DYLSYSWNSQ LRRFSSEGDG NNASEDSRFP LNKDKMGKEK
0101: STVGVEHFDS HAQLGVQDQI EWLNNEKRAS ESRKESPFLN KRERLKNEFL RRIQPWETIQ LSWESFPYYV HEHTKDTLVE CVSSHIKQKS MTSKYGARLD
0201: SSSGRILLQS VPGTELYRER LVRALARDTQ VPLLVLDSSV LAPYDFADDY NEESESDDDI AESDQCTSQS EAEEETDGDN DDTSSSETKI EGTDDEERYL
0301: EISKEVLKKL GADIEDIEKR MSEQLYGSSE VSEAAAVDQD DKAKRPLKKG DQVKYVGSPK KDEAKHRVVL GKISTSDGQK SAFTVIPGRP LSSGQRGEVY
0401: EVIGNRVAVI FEYGDDKTSE GSEKKPAEQP QMLPIHWLDV KDLKYDLDMQ AVDGYIAMEA LNEVLQSIQP LIVYFPDSTQ WLSRAVPKTR RKEFVDKVKE
0501: MFDKLSGPIV MICGQNKIET GSKEREKFTM VLPNLSRVVK LPLPLKGLTE GFTGRGKSEE NEIYKLFTNV MRLHPPKEED TLRLFKKQLG EDRRIVISRS
0601: NINELLKALE EHELLCTDLY QVNTDGVILT KQKAEKAIGW AKNHYLASCP VPLVKGGRLS LPRESLEISI ARLRKLEDNS LKPSQNLKNI AKDEYERNFV
0701: SAVVAPGEIG VKFEDIGALE DVKKALNELV ILPMRRPELF ARGNLLRPCK GILLFGPPGT GKTLLAKALA TEAGANFISI TGSTLTSKWF GDAEKLTKAL
0801: FSFATKLAPV IIFVDEIDSL LGARGGSSEH EATRRMRNEF MAAWDGLRSK DSQRILILGA TNRPFDLDDA VIRRLPRRIY VDLPDAENRL KILKIFLTPE
0901: NLESDFQFEK LAKETEGYSG SDLKNLCIAA AYRPVQELLQ EEQKGARAEA SPGLRSLSLD DFIQSKAKVS PSVAYDATTM NELRKWNEQY GEGGSRTKSP
1001: FGF

Arabidopsis Description

p-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I4Y6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.