CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42204	Canola	cytosol, mitochondrion, plastid	97.93	95.58
AT3G19740.1	Thale cress	cytosol, mitochondrion, plastid	84.06	86.0
Os02t0749150-01	Rice	mitochondrion	21.95	83.21
Os06t0225900-01	Rice	cytosol	29.13	80.65
HORVU6Hr1G038660.1	Barley	cytosol, mitochondrion	13.48	76.97
CDY03591	Canola	cytosol, mitochondrion, plastid	71.36	72.57
CDY45052	Canola	mitochondrion	71.26	72.47
HORVU4Hr1G059020.1	Barley	cytosol, endoplasmic reticulum	17.13	72.2
CDY24618	Canola	endoplasmic reticulum	19.88	71.89
HORVU4Hr1G059040.2	Barley	cytosol	17.72	71.43
HORVU3Hr1G072480.2	Barley	cytosol	17.13	69.05
HORVU5Hr1G104980.1	Barley	endoplasmic reticulum, mitochondrion	18.6	66.08
Solyc02g014350.2.1	Tomato	mitochondrion	62.2	63.39
VIT_01s0011g02220.t01	Wine grape	cytosol, mitochondrion, plastid	62.11	63.1
KRH24190	Soybean	mitochondrion	62.99	61.6
KRH29161	Soybean	cytosol, mitochondrion	62.3	60.98
TraesCS7D01G186200.1	Wheat	mitochondrion	55.12	57.61
TraesCS7A01G184700.1	Wheat	mitochondrion	55.02	57.57
TraesCS7B01G089500.1	Wheat	mitochondrion	55.02	57.45
EES05524	Sorghum	plastid	55.61	57.24
Zm00001d052248_P009	Maize	mitochondrion	55.41	57.04
OQU76102	Sorghum	mitochondrion	53.94	56.61
TraesCS6D01G284600.1	Wheat	mitochondrion	54.63	56.46
GSMUA_Achr7P07310_001	Banana	mitochondrion	58.27	56.43
TraesCS6B01G333700.1	Wheat	mitochondrion	54.23	56.28
TraesCS6A01G305500.1	Wheat	mitochondrion	53.94	55.75
HORVU6Hr1G075440.6	Barley	mitochondrion	53.94	55.58
HORVU7Hr1G037870.1	Barley	plastid	55.31	54.09
CDX92656	Canola	cytosol	16.93	39.91
CDY71574	Canola	endoplasmic reticulum, plasma membrane	15.06	39.03
CDX92836	Canola	endoplasmic reticulum, plasma membrane	14.96	38.87
CDY29857	Canola	endoplasmic reticulum, plasma membrane	14.96	38.87
CDY19035	Canola	endoplasmic reticulum	14.96	38.78
CDY30236	Canola	endoplasmic reticulum	14.86	38.52
CDY55344	Canola	endoplasmic reticulum	14.86	38.52
CDY38752	Canola	endoplasmic reticulum	14.17	37.31
CDY18925	Canola	plastid	13.19	37.02
CDY14372	Canola	endoplasmic reticulum	14.17	36.27
CDY47077	Canola	endoplasmic reticulum, plasma membrane	13.68	35.73
CDY20251	Canola	endoplasmic reticulum	14.07	35.57
CDX96166	Canola	cytosol	22.15	33.14
CDY49165	Canola	extracellular, plasma membrane	24.8	32.27
CDY56163	Canola	extracellular, vacuole	25.49	32.17
CDY51824	Canola	extracellular, plasma membrane	25.49	32.13
CDY08360	Canola	endoplasmic reticulum	26.18	32.01
CDX84641	Canola	cytosol	11.81	32.0
CDY38192	Canola	plasma membrane	26.08	31.89
CDY19639	Canola	extracellular, vacuole	25.2	31.88
CDX79566	Canola	cytosol	11.71	31.65
CDY17260	Canola	cytosol	11.91	31.59
CDX84306	Canola	cytosol	11.91	31.35
CDX93578	Canola	cytosol	13.19	31.16
CDX95077	Canola	cytosol	13.19	31.09
CDX71438	Canola	cytosol	12.99	30.77
CDY31186	Canola	cytosol	13.09	30.65
CDY04504	Canola	cytosol	12.99	30.56
CDX83275	Canola	cytosol	12.99	30.48
CDX74745	Canola	cytosol	14.17	30.32
CDX91317	Canola	plastid	30.32	29.11
CDX90936	Canola	plastid	31.3	29.07
CDY32485	Canola	plastid	31.3	28.86
CDY37046	Canola	cytosol	14.17	28.18
CDX89214	Canola	extracellular, plasma membrane	20.96	28.1
CDX97266	Canola	plastid	31.2	28.03
CDX89933	Canola	plastid	30.81	27.08
CDX92857	Canola	endoplasmic reticulum, extracellular, plasma membrane	18.6	26.85
CDY37590	Canola	cytosol	13.39	26.61
CDY38662	Canola	cytosol	13.48	26.55
CDY29873	Canola	endoplasmic reticulum, extracellular, plasma membrane	18.31	26.53
CDY50381	Canola	plastid	31.3	26.48
CDY18018	Canola	plastid	31.69	26.39
CDY19014	Canola	endoplasmic reticulum, extracellular	18.5	26.18
CDY18129	Canola	cytosol, plastid	31.2	26.11
CDY57698	Canola	cytosol	13.48	25.8
CDY22053	Canola	plastid	31.2	25.79
CDX79393	Canola	cytosol	13.39	25.71
CDY28494	Canola	plastid	15.94	25.0
CDY34176	Canola	plastid	15.75	24.69
CDY27380	Canola	nucleus	14.07	19.27
CDX89934	Canola	cytosol	0.3	1.15

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078H433	UniProt:A0A078H433	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	EnsemblPlants:CDY33415	ProteinID:CDY33415	ProteinID:CDY33415.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:GSBRNA2T00054316001	InterPro:P-loop_NTPase	PFAM:PF00004
ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF95	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0004EE65C7
SEG:seg	:	:	:	:	:

Description

BnaC01g33100DBnaC01g33100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H433]

Coordinates

chrLK032314:-:19842..26726

Molecular Weight (calculated)

113994.0 Da

IEP (calculated)

6.689

GRAVY (calculated)

-0.543

Length

1016 amino acids

Sequence
(BLAST)

0001: MYTRAIKRNQ RWGLVLQQAK YLVRPAIRDY TVSRSYGLTN HLTSNANLRR GSLLRSFSPH GGGTSIASRS SLRLSKNIQL RRFSSEGDDK HVSLNKGSDI
0101: GDGKTGKEKT SCGVGHLDSH AQLGEQDQIE WLSNEKLASE CKKKESPLLT KRERFKNEFL RRVQPWEKIQ LSWETFPYYI YDHTKNILVE CVSSHIRQRN
0201: ATSMYGARLD SSSGRILLQG LPGTDLYQER LVRALARDVQ VPLLVLDSSV LAPYDFSDEY NEDSESDGEN AEAEADEGTT ESEAEEDSGA NSEEDSEVKT
0301: DGSDNEEARL EVTEEDIKKI VPKLEELGEL VAEELHESGG ACEAAAVEHS DKAGRPARKG DRVKYVGPSK KGDAKHRYFG LGLDVYHCCH SRFLYNLLLY
0401: LPLTTGQRGE IFEVNGNRVA VVFDNEGDKS SEGSEKKPKK QSQKPNIHWI DVKDLKHDLD MQAEDGYIAL KALNEVLQST QPLIVYFPDS SRWLSRAVPK
0501: AKRNEFVDKV EEMFDKVSGP VVMICGRNKI ETASKGREKF TMILPNFGRI AKLPLPLKHL TEGLSGRKSS DDNEIYKLFT NVMNLLPPKE EDVLAVFNKQ
0601: LVEDRRIVVS RSNLNEILKA LEENELLCTD LYQVNTDDVI LTKQRAEKVV GWARNHYLSS CSKPLIKEDR LILPRESIEI SVKRLKAQED ISRKPSHSLK
0701: NIAKDEFESN FVSAVVAPEE IGVKFDDVGA LEHVKKTLNE LVILPMRRPE LFTRGNLLRP CKGILLFGPP GTGKTLLAKA LATEAGANFI SITGSSLTSK
0801: WFGDAEKLTK ALFSFASKLS PVIIFVDEVD SLLGARGGSH EHEATRRMRN EFMAAWDGLR SKDSQRILIL GATNRPFDLD DAVIRRLPRR IYVDLPDADN
0901: RLKILKIFLT PENLETGFEF EKLAKETEGY SGSDLKNLCI AAAYRPVQEL LQEENKGSVA NGAAPDLRPL SLDDFIQSKA KVSPSVSYDA TTMNELRKWN
1001: EQYGEGGSRT KSPFGF

Best Arabidopsis Sequence Match ( AT3G19740.1 )
(BLAST)

001: MYTRALKRNQ RWGLVLQQAK YLVRPVVRDY TVSRYCGFTN KLTNSENLTR KSLLGSFSPR GGTIASGNHL SILKNSQLRS FSSEGDGRNA SEDKHISLNK
101: ENGVDDGKTG KEKSNNGVGH LDSHAQLGEQ DQIEWLNNEK LASECKKKES PFVNRRERFK NEFLRRIQPW EKIQLSWETF PYYIHDHTKD ILVECVTSHI
201: RQKNAASIYG ARLDSSSGRI LLQSVPGTEL YRERLVRALA RDVQVPLLVL DSSVLAPYDF ADDYNEESES DGENAEAEAD ESTTESDAEE DSSAQSEEDS
301: EAKADGSDSE EACLEVSEEA IKKIVPKLEE FEKLVAEELH GEACEAAAVE HSDKARRPAK KGDRVKYVGP SKKADAKHRP LSSGQRGEVY EVNGNRVAVI
401: FDIGGDTSSE GGDKKSTEHS HKLHMHWIDV GDLKHDLDMQ AEDGYIALEA LSEVLHSTQP LIVYFPDSSQ WLSRAVPKSK QNEFVDKVQE MFDKLSSPVV
501: MICGRNKIET GSKEREKFTM ILPNFGRLAK LPLPLKRLTE GLTGRKTSED NEIYKLFTNV MNLVPPKEEE NLIVFNKQLG EDRRIVMSRS NLNELLKALE
601: ENELLCTDLY QVNTDGVILT KQRAEKVIGW ARNHYLSSCP SPSIKEGRLI LPRESIEISV KRLKAQEDIS RKPTQNLKNI AKDEFETNFV SAVVAPGEIG
701: VKFDDIGALE HVKKTLNELV ILPMRRPELF TRGNLLRPCK GILLFGPPGT GKTLLAKALA TEAGANFISI TGSTLTSKWF GDAEKLTKAL FSFASKLAPV
801: IIFVDEVDSL LGARGGAFEH EATRRMRNEF MAAWDGLRSK DSQRILILGA TNRPFDLDDA VIRRLPRRIY VDLPDAENRL KILKIFLTPE NLETGFEFDK
901: LAKETEGYSG SDLKNLCIAA AYRPVQELLQ EENKDSVTNA SPDLRPLSLD DFIQSKAKVS PSVAYDATTM NELRKWNEQY GEGGTRTKSP FGF

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JCC9]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.