Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84641 | Canola | cytosol | 98.4 | 98.67 |
| CDY17260 | Canola | cytosol | 93.09 | 91.38 |
| CDX84306 | Canola | cytosol | 93.09 | 90.67 |
| AT2G34560.2 | Thale cress | cytosol | 88.56 | 84.73 |
| Solyc02g070440.2.1 | Tomato | cytosol | 74.2 | 72.28 |
| PGSC0003DMT400054532 | Potato | cytosol | 73.67 | 71.39 |
| VIT_10s0003g03500.t01 | Wine grape | cytosol | 75.0 | 71.03 |
| KRH58481 | Soybean | cytosol | 75.27 | 70.22 |
| KRH42362 | Soybean | cytosol, endoplasmic reticulum | 75.27 | 69.88 |
| TraesCS3B01G305600.2 | Wheat | cytosol | 72.34 | 68.86 |
| GSMUA_Achr10P... | Banana | cytosol | 70.74 | 68.73 |
| TraesCS3A01G294400.1 | Wheat | cytosol | 68.88 | 68.52 |
| HORVU3Hr1G072910.6 | Barley | cytosol | 68.35 | 68.35 |
| Os01t0757400-02 | Rice | cytosol | 69.95 | 68.13 |
| EES01499 | Sorghum | cytosol | 68.88 | 67.98 |
| TraesCS3A01G271900.1 | Wheat | cytosol | 71.81 | 67.5 |
| TraesCS3D01G271500.1 | Wheat | cytosol | 71.54 | 67.25 |
| TraesCS3B01G329000.2 | Wheat | cytosol | 68.62 | 66.67 |
| OQU87315 | Sorghum | cytosol | 71.01 | 66.25 |
| GSMUA_Achr7P25300_001 | Banana | cytosol | 71.54 | 66.09 |
| Os01t0673500-01 | Rice | cytosol | 71.81 | 65.85 |
| Zm00001d043410_P002 | Maize | cytosol | 68.88 | 62.41 |
| TraesCS3D01G294200.1 | Wheat | plastid | 69.15 | 58.69 |
| Bra022979.1-P | Field mustard | plastid | 89.89 | 58.58 |
| HORVU3Hr1G061800.1 | Barley | cytosol, plastid | 71.28 | 57.63 |
| Zm00001d011563_P019 | Maize | mitochondrion | 71.54 | 51.24 |
| CDY18925 | Canola | plastid | 36.44 | 37.85 |
| CDX95077 | Canola | cytosol | 37.77 | 32.95 |
| CDX93578 | Canola | cytosol | 37.5 | 32.79 |
| CDY31186 | Canola | cytosol | 37.5 | 32.49 |
| CDX71438 | Canola | cytosol | 36.7 | 32.17 |
| CDX83275 | Canola | cytosol | 36.97 | 32.1 |
| CDY04504 | Canola | cytosol | 36.7 | 31.94 |
| CDY37590 | Canola | cytosol | 39.89 | 29.35 |
| CDY38662 | Canola | cytosol | 39.89 | 29.07 |
| CDX74745 | Canola | cytosol | 36.7 | 29.05 |
| CDX79393 | Canola | cytosol | 40.16 | 28.54 |
| CDY57698 | Canola | cytosol | 39.63 | 28.06 |
| CDY71574 | Canola | endoplasmic reticulum, plasma membrane | 28.72 | 27.55 |
| CDY19035 | Canola | endoplasmic reticulum | 28.72 | 27.55 |
| CDX92836 | Canola | endoplasmic reticulum, plasma membrane | 28.46 | 27.37 |
| CDY29857 | Canola | endoplasmic reticulum, plasma membrane | 28.46 | 27.37 |
| CDY30236 | Canola | endoplasmic reticulum | 28.46 | 27.3 |
| CDY55344 | Canola | endoplasmic reticulum | 28.46 | 27.3 |
| CDY38752 | Canola | endoplasmic reticulum | 27.93 | 27.2 |
| CDY37046 | Canola | cytosol | 36.97 | 27.2 |
| CDY14372 | Canola | endoplasmic reticulum | 28.19 | 26.7 |
| CDY47077 | Canola | endoplasmic reticulum, plasma membrane | 27.39 | 26.48 |
| CDY20251 | Canola | endoplasmic reticulum | 28.19 | 26.37 |
| CDY24618 | Canola | endoplasmic reticulum | 19.41 | 25.98 |
| CDX92656 | Canola | cytosol | 26.86 | 23.43 |
| CDY28494 | Canola | plastid | 37.5 | 21.76 |
| CDY34176 | Canola | plastid | 37.5 | 21.76 |
| CDY27380 | Canola | nucleus | 36.97 | 18.73 |
| CDX96166 | Canola | cytosol | 31.38 | 17.38 |
| CDY49165 | Canola | extracellular, plasma membrane | 31.65 | 15.24 |
| CDY56163 | Canola | extracellular, vacuole | 32.45 | 15.16 |
| CDY51824 | Canola | extracellular, plasma membrane | 32.45 | 15.14 |
| CDY19639 | Canola | extracellular, vacuole | 32.18 | 15.07 |
| CDY38192 | Canola | plasma membrane | 31.91 | 14.44 |
| CDY08360 | Canola | endoplasmic reticulum | 31.65 | 14.32 |
| CDY45052 | Canola | mitochondrion | 33.78 | 12.71 |
| CDY03591 | Canola | cytosol, mitochondrion, plastid | 33.24 | 12.51 |
| CDX91317 | Canola | plastid | 34.31 | 12.19 |
| CDY32485 | Canola | plastid | 35.64 | 12.16 |
| CDX90936 | Canola | plastid | 35.11 | 12.07 |
| CDX89214 | Canola | extracellular, plasma membrane | 23.94 | 11.87 |
| CDY33415 | Canola | cytosol, mitochondrion | 31.65 | 11.71 |
| CDY42204 | Canola | cytosol, mitochondrion, plastid | 31.91 | 11.53 |
| CDX89933 | Canola | plastid | 35.11 | 11.42 |
| CDX97266 | Canola | plastid | 34.31 | 11.41 |
| CDY18129 | Canola | cytosol, plastid | 35.37 | 10.96 |
| CDY50381 | Canola | plastid | 34.84 | 10.91 |
| CDY19014 | Canola | endoplasmic reticulum, extracellular | 20.74 | 10.86 |
| CDY18018 | Canola | plastid | 35.11 | 10.82 |
| CDY22053 | Canola | plastid | 34.57 | 10.58 |
| CDX92857 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 19.15 | 10.23 |
| CDY29873 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 18.62 | 9.99 |
| CDX89934 | Canola | cytosol | 0.27 | 0.38 |
Protein Annotations
| EnsemblPlants:CDX79566 | EnsemblPlantsGene:GSBRNA2T00132327001 | Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | GO:A0A078CQY6 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_core | InterPro:P-loop_NTPase |
| PANTHER:PTHR23074 | PANTHER:PTHR23074:SF92 | PFAM:PF00004 | ProteinID:CDX79566 | ProteinID:CDX79566.1 | SMART:SM00382 |
| SUPFAM:SSF52540 | UniParc:UPI0004EEECBE | MapMan:50.3.6 | : | : | : |
Description
BnaC03g19020D
Coordinates
chrLK031818:+:840187..842679
Molecular Weight (calculated)
42014.3 Da
IEP (calculated)
5.533
GRAVY (calculated)
-0.430
Length
376 amino acids
Sequence
(BLAST)
(BLAST)
001: MATDEPSPSR WSFLFGRKKL SEEQQEDGPS NTTKEEPSQV VTNPVQEEGN TGLANGIREK PKKSMFPPFE SAETRALAES LSRDIIRGNP NVKWESIKGL
101: ENAKRLLKEA VVMPIKYPSY FNGLLSPWKG ILLFGPPGIG KTMLAKAVAT ECNTTFFNIS ASSVVSKWRG DSEKLIRVLF DLAKHHAPST IFLDEIDAII
201: SQRGGEGRSE HEASRRLKTE LLIQMDGLQK TNELVFVLAA TNLPWELDAA MLRRLEKRIL VPLPDPEARR GMFEMLLPSQ PGDEPLLHDV LVEKSEGYSG
301: SDVRILCKEA AMQPLRRTLA VLEDTEELVP EDELPKVGAI LPEDIDRALS NTRPSAHLHA HLYDKFNDDY GSHILK
101: ENAKRLLKEA VVMPIKYPSY FNGLLSPWKG ILLFGPPGIG KTMLAKAVAT ECNTTFFNIS ASSVVSKWRG DSEKLIRVLF DLAKHHAPST IFLDEIDAII
201: SQRGGEGRSE HEASRRLKTE LLIQMDGLQK TNELVFVLAA TNLPWELDAA MLRRLEKRIL VPLPDPEARR GMFEMLLPSQ PGDEPLLHDV LVEKSEGYSG
301: SDVRILCKEA AMQPLRRTLA VLEDTEELVP EDELPKVGAI LPEDIDRALS NTRPSAHLHA HLYDKFNDDY GSHILK
001: MATDEPSQTR WSFLFGRKKL PEEDVSNKDQ PEDGSSNGNN GDVNNNSSPV TNQDGNTALA NGNVIREKPK KSMFPPFESA ETRTLAESLS RDIIRGNPNI
101: KWESIKGLEN AKKLLKEAVV MPIKYPTYFN GLLTPWKGIL LFGPPGTGKT MLAKAVATEC NTTFFNISAS SVVSKWRGDS EKLIRVLFDL ARHHAPSTIF
201: LDEIDAIISQ RGGEGRSEHE ASRRLKTELL IQMDGLQKTN ELVFVLAATN LPWELDAAML RRLEKRILVP LPDPEARRGM FEMLIPSQPG DEPLPHDVLV
301: EKSEGYSGSD IRILCKEAAM QPLRRTLAIL EDREDVVPED ELPKIGPILP EDIDRALSNT RPSAHLHAHL YDKFNDDYGS QILK
101: KWESIKGLEN AKKLLKEAVV MPIKYPTYFN GLLTPWKGIL LFGPPGTGKT MLAKAVATEC NTTFFNISAS SVVSKWRGDS EKLIRVLFDL ARHHAPSTIF
201: LDEIDAIISQ RGGEGRSEHE ASRRLKTELL IQMDGLQKTN ELVFVLAATN LPWELDAAML RRLEKRILVP LPDPEARRGM FEMLIPSQPG DEPLPHDVLV
301: EKSEGYSGSD IRILCKEAAM QPLRRTLAIL EDREDVVPED ELPKIGPILP EDIDRALSNT RPSAHLHAHL YDKFNDDYGS QILK
Arabidopsis Description
AT2G34560 protein [Source:UniProtKB/TrEMBL;Acc:B9DGC0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.