Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU87315 | Sorghum | cytosol | 78.81 | 75.68 |
| GSMUA_Achr7P25300_001 | Banana | cytosol | 79.07 | 75.18 |
| TraesCS3B01G305600.2 | Wheat | cytosol | 75.45 | 73.92 |
| Os01t0673500-01 | Rice | cytosol | 77.78 | 73.41 |
| VIT_10s0003g03500.t01 | Wine grape | cytosol | 75.19 | 73.3 |
| TraesCS3A01G271900.1 | Wheat | cytosol | 75.71 | 73.25 |
| TraesCS3D01G271500.1 | Wheat | cytosol | 74.94 | 72.5 |
| Solyc02g070440.2.1 | Tomato | cytosol | 71.58 | 71.76 |
| KRH58481 | Soybean | cytosol | 74.68 | 71.71 |
| CDX84641 | Canola | cytosol | 69.25 | 71.47 |
| KRH42362 | Soybean | cytosol, endoplasmic reticulum | 74.42 | 71.11 |
| CDY17260 | Canola | cytosol | 70.03 | 70.76 |
| CDX79566 | Canola | cytosol | 68.73 | 70.74 |
| CDX84306 | Canola | cytosol | 70.54 | 70.73 |
| PGSC0003DMT400054532 | Potato | cytosol | 70.8 | 70.62 |
| Bra005414.1-P | Field mustard | cytosol | 70.54 | 69.64 |
| AT2G34560.2 | Thale cress | cytosol | 70.03 | 68.96 |
| HORVU3Hr1G061800.1 | Barley | cytosol, plastid | 75.45 | 62.8 |
| Zm00001d011563_P019 | Maize | mitochondrion | 77.0 | 56.76 |
| Bra022979.1-P | Field mustard | plastid | 69.77 | 46.79 |
| GSMUA_Achr4P24320_001 | Banana | cytosol | 35.92 | 34.07 |
| GSMUA_Achr2P22550_001 | Banana | cytosol | 35.92 | 33.74 |
| GSMUA_Achr6P09890_001 | Banana | cytosol | 26.36 | 33.55 |
| GSMUA_Achr3P01430_001 | Banana | cytosol | 35.14 | 33.09 |
| GSMUA_Achr11P... | Banana | cytosol | 26.1 | 31.96 |
| GSMUA_Achr11P... | Banana | cytosol | 24.81 | 30.28 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 29.46 | 29.38 |
| GSMUA_Achr4P05220_001 | Banana | endoplasmic reticulum | 29.2 | 29.12 |
| GSMUA_Achr10P... | Banana | cytosol | 35.66 | 26.54 |
| GSMUA_Achr4P00810_001 | Banana | cytosol | 39.53 | 25.04 |
| GSMUA_Achr6P27610_001 | Banana | cytosol | 37.21 | 21.98 |
| GSMUA_Achr9P05420_001 | Banana | cytosol, mitochondrion | 33.33 | 19.79 |
| GSMUA_Achr11P... | Banana | cytosol | 32.3 | 17.73 |
| GSMUA_Achr7P14270_001 | Banana | cytosol | 31.78 | 17.4 |
| GSMUA_Achr11P... | Banana | cytosol | 31.27 | 13.46 |
| GSMUA_Achr8P33760_001 | Banana | cytosol | 32.82 | 11.5 |
| GSMUA_Achr7P07310_001 | Banana | mitochondrion | 31.01 | 11.44 |
| GSMUA_Achr8P10090_001 | Banana | cytosol | 31.52 | 11.22 |
| GSMUA_Achr3P00740_001 | Banana | mitochondrion | 32.3 | 10.9 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:50.3.6 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_core | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | EnsemblPlantsGene:GSMUA_Achr10G21590_001 | EnsemblPlants:GSMUA_Achr10P21590_001 | EnsemblPlants:GSMUA_Achr10T21590_001 |
| UniProt:M0RK84 | InterPro:P-loop_NTPase | PFAM:PF00004 | PANTHER:PTHR23074 | PANTHER:PTHR23074:SF92 | SMART:SM00382 |
| SUPFAM:SSF52540 | UniParc:UPI000295704C | SEG:seg | : | : | : |
Description
Katanin p60 ATPase-containing subunit A-like 2 [Source:GMGC_GENE;Acc:GSMUA_Achr10G21590_001]
Coordinates
chr10:-:27143767..27146471
Molecular Weight (calculated)
43690.5 Da
IEP (calculated)
6.862
GRAVY (calculated)
-0.450
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MPQEVKMFFG WGKETKKDNA VVESTPAHTN GSFANGRKAD LAVYEQFEQQ ERATGARPGV ISDAERPQRP LLPPFESAEV RTLAETLCRD IIRGSPDVKW
101: ESIKGLDNAK RLLKEAVVMP IKYPKYFTGL LSPWKGILLF GPPGTGKTML AKAVATECKT TFFNISASSI VSKWRGDSEK LVRVLFELAR HHAPATIFLD
201: EIDAIISQRG EARSEHEASR RLKTELLIQM DGLTKTNELV FVLAATNLPW ELDAAMLRRL EKRILVPLPE PEARRAMFEE LLPSVPAKAE VPYDCLVEKT
301: EGYSGSDIRL VCKEAAMQPL RRLMSYLEDR QQRQQQDEKI DDDELPPVGP VTPEDIEVAL KNTRPSAHLH AHRYHKFNED YGSHVLH
101: ESIKGLDNAK RLLKEAVVMP IKYPKYFTGL LSPWKGILLF GPPGTGKTML AKAVATECKT TFFNISASSI VSKWRGDSEK LVRVLFELAR HHAPATIFLD
201: EIDAIISQRG EARSEHEASR RLKTELLIQM DGLTKTNELV FVLAATNLPW ELDAAMLRRL EKRILVPLPE PEARRAMFEE LLPSVPAKAE VPYDCLVEKT
301: EGYSGSDIRL VCKEAAMQPL RRLMSYLEDR QQRQQQDEKI DDDELPPVGP VTPEDIEVAL KNTRPSAHLH AHRYHKFNED YGSHVLH
001: MATDEPSQTR WSFLFGRKKL PEEDVSNKDQ PEDGSSNGNN GDVNNNSSPV TNQDGNTALA NGNVIREKPK KSMFPPFESA ETRTLAESLS RDIIRGNPNI
101: KWESIKGLEN AKKLLKEAVV MPIKYPTYFN GLLTPWKGIL LFGPPGTGKT MLAKAVATEC NTTFFNISAS SVVSKWRGDS EKLIRVLFDL ARHHAPSTIF
201: LDEIDAIISQ RGGEGRSEHE ASRRLKTELL IQMDGLQKTN ELVFVLAATN LPWELDAAML RRLEKRILVP LPDPEARRGM FEMLIPSQPG DEPLPHDVLV
301: EKSEGYSGSD IRILCKEAAM QPLRRTLAIL EDREDVVPED ELPKIGPILP EDIDRALSNT RPSAHLHAHL YDKFNDDYGS QILK
101: KWESIKGLEN AKKLLKEAVV MPIKYPTYFN GLLTPWKGIL LFGPPGTGKT MLAKAVATEC NTTFFNISAS SVVSKWRGDS EKLIRVLFDL ARHHAPSTIF
201: LDEIDAIISQ RGGEGRSEHE ASRRLKTELL IQMDGLQKTN ELVFVLAATN LPWELDAAML RRLEKRILVP LPDPEARRGM FEMLIPSQPG DEPLPHDVLV
301: EKSEGYSGSD IRILCKEAAM QPLRRTLAIL EDREDVVPED ELPKIGPILP EDIDRALSNT RPSAHLHAHL YDKFNDDYGS QILK
Arabidopsis Description
AT2G34560 protein [Source:UniProtKB/TrEMBL;Acc:B9DGC0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.