Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G271900.1 | Wheat | cytosol | 97.75 | 97.75 |
| TraesCS3B01G305600.2 | Wheat | cytosol | 96.25 | 97.47 |
| Os01t0673500-01 | Rice | cytosol | 87.25 | 85.12 |
| OQU87315 | Sorghum | cytosol | 85.0 | 84.37 |
| HORVU3Hr1G061800.1 | Barley | cytosol, plastid | 95.0 | 81.72 |
| GSMUA_Achr10P... | Banana | cytosol | 72.5 | 74.94 |
| Solyc02g070440.2.1 | Tomato | cytosol | 71.5 | 74.09 |
| KRH58481 | Soybean | cytosol | 74.5 | 73.95 |
| PGSC0003DMT400054532 | Potato | cytosol | 71.25 | 73.45 |
| KRH42362 | Soybean | cytosol, endoplasmic reticulum | 74.0 | 73.09 |
| CDY17260 | Canola | cytosol | 69.25 | 72.32 |
| CDX84641 | Canola | cytosol | 67.75 | 72.27 |
| VIT_10s0003g03500.t01 | Wine grape | cytosol | 71.5 | 72.04 |
| Bra005414.1-P | Field mustard | cytosol | 70.25 | 71.68 |
| CDX79566 | Canola | cytosol | 67.25 | 71.54 |
| CDX84306 | Canola | cytosol | 68.5 | 70.98 |
| AT2G34560.2 | Thale cress | cytosol | 69.0 | 70.23 |
| TraesCS3D01G294200.1 | Wheat | plastid | 74.0 | 66.82 |
| Zm00001d011563_P019 | Maize | mitochondrion | 84.0 | 64.0 |
| Bra022979.1-P | Field mustard | plastid | 67.25 | 46.62 |
| TraesCS3D01G053600.1 | Wheat | cytosol | 38.0 | 34.7 |
| TraesCS6D01G122900.1 | Wheat | cytosol | 35.75 | 32.72 |
| TraesCS3D01G265900.1 | Wheat | cytosol | 40.25 | 30.9 |
| TraesCS7D01G060200.1 | Wheat | cytosol | 36.5 | 30.61 |
| TraesCS7D01G381400.1 | Wheat | endoplasmic reticulum | 27.5 | 29.57 |
| TraesCS5D01G123800.1 | Wheat | nucleus | 35.0 | 20.35 |
| TraesCS3D01G228100.4 | Wheat | cytosol | 32.5 | 16.19 |
| TraesCS3D01G159200.1 | Wheat | cytosol, vacuole | 31.5 | 15.07 |
| TraesCS1D01G431700.1 | Wheat | mitochondrion | 32.0 | 15.04 |
| TraesCS7D01G186200.1 | Wheat | mitochondrion | 32.5 | 13.37 |
| TraesCS7D01G127200.1 | Wheat | cytosol | 31.75 | 12.85 |
| TraesCS6D01G284600.1 | Wheat | mitochondrion | 30.5 | 12.41 |
| TraesCS4D01G168600.1 | Wheat | cytosol | 34.25 | 12.38 |
| TraesCS2D01G114500.1 | Wheat | cytosol, plastid | 34.0 | 11.99 |
| TraesCS4D01G145100.12 | Wheat | plastid | 33.5 | 10.91 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G271500.1 | EnsemblPlantsGene:TraesCS3D01G271500 | Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_core | InterPro:P-loop_NTPase | PANTHER:PTHR23074 |
| PANTHER:PTHR23074:SF92 | PFAM:PF00004 | SEG:seg | SMART:SM00382 | SUPFAM:SSF52540 | TIGR:cd00009 |
| MapMan:50.3.6 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:376266402..376272704
Molecular Weight (calculated)
44451.9 Da
IEP (calculated)
4.759
GRAVY (calculated)
-0.362
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGDEPSVT RWSFQDFERY YDAGLGICRQ PKGDGDDDDD APPGSGSADA AHGHANGGAD LSVFEQFQRL DRNVELRNGA MDVGPPQKSM LPSFESAETC
101: NLAETLLRDI IRGSPDVKWE SIKGLETAKR LLKEAVVMPI KYPKYFTGLL SPWKGILLFG PPGTGKTMLA KAVATECKTT FFNISASSIV SKWRGDSEKL
201: VKVLFELARH HAPSTIFLDE IDAIISQRGE ARSEHEASRR LKTELLIQMD GLTKTDELVF VLAATNLPWE LDAAMLRRLE KRILVPLPEA EARHAMFEEF
301: LPSTPDTMEI PYDVLVESTE GYSGSDIRLV CKEAAMQPLR RLMAVLEGRQ EEMPEDELPE VGPIAAEDIE LALRNTRPSA HLHAHRYEQF NQDYGSHVIG
101: NLAETLLRDI IRGSPDVKWE SIKGLETAKR LLKEAVVMPI KYPKYFTGLL SPWKGILLFG PPGTGKTMLA KAVATECKTT FFNISASSIV SKWRGDSEKL
201: VKVLFELARH HAPSTIFLDE IDAIISQRGE ARSEHEASRR LKTELLIQMD GLTKTDELVF VLAATNLPWE LDAAMLRRLE KRILVPLPEA EARHAMFEEF
301: LPSTPDTMEI PYDVLVESTE GYSGSDIRLV CKEAAMQPLR RLMAVLEGRQ EEMPEDELPE VGPIAAEDIE LALRNTRPSA HLHAHRYEQF NQDYGSHVIG
001: MATDEPSQTR WSFLEFKTFY DAKFGRKKLP EEDVSNKDQP EDGSSNGNNG DVNNNSSPVT NQDGNTALAN GNVIREKPKK SMFPPFESAE TRTLAESLSR
101: DIIRGNPNIK WESIKGLENA KKLLKEAVVM PIKYPTYFNG LLTPWKGILL FGPPGTGKTM LAKAVATECN TTFFNISASS VVSKWRGDSE KLIRVLFDLA
201: RHHAPSTIFL DEIDAIISQR GGEGRSEHEA SRRLKTELLI QMDGLQKTNE LVFVLAATNL PWELDAAMLR RLEKRILVPL PDPEARRGMF EMLIPSQPGD
301: EPLPHDVLVE KSEGYSGSDI RILCKEAAMQ PLRRTLAILE DREDVVPEDE LPKIGPILPE DIDRALSNTR PSAHLHAHLY DKFNDDYGSQ ILK
101: DIIRGNPNIK WESIKGLENA KKLLKEAVVM PIKYPTYFNG LLTPWKGILL FGPPGTGKTM LAKAVATECN TTFFNISASS VVSKWRGDSE KLIRVLFDLA
201: RHHAPSTIFL DEIDAIISQR GGEGRSEHEA SRRLKTELLI QMDGLQKTNE LVFVLAATNL PWELDAAMLR RLEKRILVPL PDPEARRGMF EMLIPSQPGD
301: EPLPHDVLVE KSEGYSGSDI RILCKEAAMQ PLRRTLAILE DREDVVPEDE LPKIGPILPE DIDRALSNTR PSAHLHAHLY DKFNDDYGSQ ILK
Arabidopsis Description
AT2G34560 protein [Source:UniProtKB/TrEMBL;Acc:B9DGC0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.