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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra005414.1-P Field mustard cytosol 100.0 97.7
CDX84306 Canola cytosol 97.91 97.15
CDX84641 Canola cytosol 92.17 94.13
CDX79566 Canola cytosol 91.38 93.09
AT2G34560.2 Thale cress cytosol 89.82 87.53
VIT_10s0003g03500.t01 Wine grape cytosol 76.5 73.8
Solyc02g070440.2.1 Tomato cytosol 73.89 73.32
PGSC0003DMT400054532 Potato cytosol 73.63 72.68
KRH58481 Soybean cytosol 74.93 71.22
KRH42362 Soybean cytosol, endoplasmic reticulum 74.93 70.86
TraesCS3B01G305600.2 Wheat cytosol 72.58 70.38
GSMUA_Achr10P... Banana cytosol 70.76 70.03
Os01t0757400-02 Rice cytosol 69.97 69.43
TraesCS3A01G294400.1 Wheat cytosol 68.41 69.31
EES01499 Sorghum cytosol 68.93 69.29
TraesCS3A01G271900.1 Wheat cytosol 72.32 69.25
TraesCS3D01G271500.1 Wheat cytosol 72.32 69.25
HORVU3Hr1G072910.6 Barley cytosol 67.62 68.88
OQU87315 Sorghum cytosol 71.54 67.99
TraesCS3B01G329000.2 Wheat cytosol 68.41 67.7
GSMUA_Achr7P25300_001 Banana cytosol 71.8 67.57
Os01t0673500-01 Rice cytosol 72.06 67.32
Zm00001d043410_P002 Maize cytosol 68.67 63.37
TraesCS3D01G294200.1 Wheat plastid 68.93 59.59
HORVU3Hr1G061800.1 Barley cytosol, plastid 71.28 58.71
Zm00001d011563_P019 Maize mitochondrion 72.06 52.57
CDY18925 Canola plastid 35.77 37.85
CDX95077 Canola cytosol 37.6 33.41
CDX93578 Canola cytosol 37.34 33.26
CDY31186 Canola cytosol 37.34 32.95
CDX71438 Canola cytosol 36.55 32.63
CDX83275 Canola cytosol 36.81 32.56
CDY04504 Canola cytosol 36.55 32.41
CDY37590 Canola cytosol 40.47 30.33
CDY38662 Canola cytosol 40.47 30.04
CDX79393 Canola cytosol 40.99 29.68
CDY57698 Canola cytosol 40.47 29.19
CDX74745 Canola cytosol 36.03 29.05
CDY19035 Canola endoplasmic reticulum 29.24 28.57
CDY71574 Canola endoplasmic reticulum, plasma membrane 29.24 28.57
CDX92836 Canola endoplasmic reticulum, plasma membrane 28.98 28.39
CDY29857 Canola endoplasmic reticulum, plasma membrane 28.98 28.39
CDY30236 Canola endoplasmic reticulum 28.98 28.32
CDY55344 Canola endoplasmic reticulum 28.98 28.32
CDY38752 Canola endoplasmic reticulum 27.94 27.72
CDY14372 Canola endoplasmic reticulum 28.72 27.71
CDY37046 Canola cytosol 36.55 27.4
CDY20251 Canola endoplasmic reticulum 28.72 27.36
CDY47077 Canola endoplasmic reticulum, plasma membrane 27.42 26.99
CDY24618 Canola endoplasmic reticulum 19.06 25.98
CDX92656 Canola cytosol 26.63 23.67
CDY28494 Canola plastid 37.6 22.22
CDY34176 Canola plastid 37.34 22.07
CDY27380 Canola nucleus 36.55 18.87
CDX96166 Canola cytosol 31.85 17.97
CDY49165 Canola extracellular, plasma membrane 32.64 16.01
CDY19639 Canola extracellular, vacuole 33.16 15.82
CDY56163 Canola extracellular, vacuole 33.16 15.78
CDY51824 Canola extracellular, plasma membrane 33.16 15.76
CDY38192 Canola plasma membrane 32.64 15.04
CDY08360 Canola endoplasmic reticulum 32.38 14.92
CDY45052 Canola mitochondrion 33.68 12.91
CDY03591 Canola cytosol, mitochondrion, plastid 33.16 12.71
CDX91317 Canola plastid 34.2 12.38
CDY32485 Canola plastid 35.51 12.34
CDX89214 Canola extracellular, plasma membrane 24.28 12.27
CDX90936 Canola plastid 34.73 12.16
CDY33415 Canola cytosol, mitochondrion 31.59 11.91
CDY42204 Canola cytosol, mitochondrion, plastid 31.85 11.72
CDX89933 Canola plastid 34.99 11.59
CDX97266 Canola plastid 34.2 11.58
CDY19014 Canola endoplasmic reticulum, extracellular 21.41 11.42
CDY18129 Canola cytosol, plastid 35.25 11.12
CDY50381 Canola plastid 34.73 11.07
CDY18018 Canola plastid 34.99 10.98
CDY22053 Canola plastid 34.46 10.74
CDX92857 Canola endoplasmic reticulum, extracellular, plasma membrane 19.58 10.65
CDY29873 Canola endoplasmic reticulum, extracellular, plasma membrane 19.06 10.41
CDX89934 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDY17260EnsemblPlantsGene:GSBRNA2T00095340001Gene3D:1.10.8.60Gene3D:3.40.50.300GO:A0A078FRV4GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005524InterPro:AAA+_ATPaseInterPro:ATPase_AAA_coreInterPro:P-loop_NTPase
PANTHER:PTHR23074PANTHER:PTHR23074:SF92PFAM:PF00004ProteinID:CDY17260ProteinID:CDY17260.1SMART:SM00382
SUPFAM:SSF52540UniParc:UPI0004EEC057UniProt:A0A078FRV4MapMan:50.3.6::
Description
BnaA05g09280DBnaA05g09280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FRV4]
Coordinates
chrLK032071:+:686294..688908
Molecular Weight (calculated)
42833.2 Da
IEP (calculated)
5.555
GRAVY (calculated)
-0.485
Length
383 amino acids
Sequence
(BLAST)
001: MATDEPSLTR WSFLFGRKKL PEEPQESKPE DGSSSNKEED ASQVATNPSQ EGNTRLTNGI REKPKKSMFP PFESAETRAL AESLSRQAIL DIIRGNPNVK
101: WESIKGLENA KRLLKEAVVM PIKYPSYFNG LLSPWKGILL FGPPGTGKTM LAKAVATECN TTFFNISASS VVSKWRGDSE KLIRVLFDLA RHHAPSTIFL
201: DEIDAIISQR GGEGRSEHEA SRRLKTELLI QMDGLQKTNE LVFVLAATNL PWELDAAMLR RLEKRILVPL PDPEARRGMF EMLLPSQPGD EPLPHDVLVE
301: KSEGYSGSDI RILCKEAAMQ PLRRTLASLE DTEEIVPEDE LPKVGPILPE DIDRALSNTR PSAHLHAHLY DKFNDDYGSQ IIK
Best Arabidopsis Sequence Match ( AT2G34560.1 )
(BLAST)
001: MATDEPSQTR WSFLFGRKKL PEEDVSNKDQ PEDGSSNGNN GDVNNNSSPV TNQDGNTALA NGNVIREKPK KSMFPPFESA ETRTLAESLS RDIIRGNPNI
101: KWESIKGLEN AKKLLKEAVV MPIKYPTYFN GLLTPWKGIL LFGPPGTGKT MLAKAVATEC NTTFFNISAS SVVSKWRGDS EKLIRVLFDL ARHHAPSTIF
201: LDEIDAIISQ RGGEGRSEHE ASRRLKTELL IQMDGLQKTN ELVFVLAATN LPWELDAAML RRLEKRILVP LPDPEARRGM FEMLIPSQPG DEPLPHDVLV
301: EKSEGYSGSD IRILCKEAAM QPLRRTLAIL EDREDVVPED ELPKIGPILP EDIDRALSNT RPSAHLHAHL YDKFNDDYGS QILK
Arabidopsis Description
AT2G34560 protein [Source:UniProtKB/TrEMBL;Acc:B9DGC0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.