Factsheet for TraesCS3B01G329000.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G294400.1	Wheat	cytosol	96.64	98.94
HORVU3Hr1G072910.6	Barley	cytosol	94.06	96.81
EES01499	Sorghum	cytosol	89.15	90.55
Os01t0757400-02	Rice	cytosol	90.18	90.41
TraesCS3D01G294200.1	Wheat	plastid	96.38	84.2
Zm00001d043410_P002	Maize	cytosol	88.63	82.65
TraesCS3B01G305600.2	Wheat	cytosol	76.23	74.68
GSMUA_Achr7P25300_001	Banana	cytosol	77.0	73.22
Solyc02g070440.2.1	Tomato	cytosol	70.8	70.98
KRH58481	Soybean	cytosol	73.9	70.97
VIT_10s0003g03500.t01	Wine grape	cytosol	72.35	70.53
KRH42362	Soybean	cytosol, endoplasmic reticulum	73.64	70.37
PGSC0003DMT400054532	Potato	cytosol	70.54	70.36
CDX84641	Canola	cytosol	66.93	69.07
CDX79566	Canola	cytosol	66.67	68.62
CDY17260	Canola	cytosol	67.7	68.41
CDX84306	Canola	cytosol	67.7	67.88
Bra005414.1-P	Field mustard	cytosol	67.96	67.09
AT2G34560.2	Thale cress	cytosol	66.67	65.65
Bra022979.1-P	Field mustard	plastid	67.44	45.23
TraesCS1B01G120800.1	Wheat	cytosol	22.48	34.39
TraesCS3B01G065200.1	Wheat	cytosol	35.66	31.51
TraesCS6B01G161700.1	Wheat	cytosol	34.63	30.66
TraesCS7B01G287800.1	Wheat	golgi	29.2	30.29
TraesCS3B01G299100.1	Wheat	cytosol	39.53	29.37
TraesCS5B01G110300.1	Wheat	nucleus	36.18	20.35
TraesCS7B01G028300.1	Wheat	cytosol	33.59	16.48
TraesCS3B01G254800.2	Wheat	cytosol	32.04	15.4
TraesCS3B01G178200.1	Wheat	cytosol, vacuole	32.3	14.88
TraesCS1B01G455200.1	Wheat	mitochondrion	31.52	14.29
TraesCS7B01G089500.1	Wheat	mitochondrion	33.59	13.36
TraesCS6B01G333700.1	Wheat	mitochondrion	31.27	12.36
TraesCS4B01G155600.1	Wheat	cytosol	34.37	12.09
TraesCS2B01G132900.3	Wheat	cytosol, plastid	34.11	12.0
TraesCS4B01G126300.7	Wheat	nucleus	33.85	10.41

Protein Annotations

EnsemblPlants:TraesCS3B01G329000.2	EnsemblPlantsGene:TraesCS3B01G329000	Gene3D:1.10.8.60	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase	PANTHER:PTHR23074
PANTHER:PTHR23074:SF92	PFAM:PF00004	SEG:seg	SMART:SM00382	SUPFAM:SSF52540	TIGR:cd00009
MapMan:50.3.6	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:531788097..531794302

Molecular Weight (calculated)

43395.4 Da

IEP (calculated)

6.136

GRAVY (calculated)

-0.307

Length

387 amino acids

Sequence
(BLAST)

001: MDLMAFFGGK KQGPEQNGHA NGAAPNGSVK KRTTDLAIYE QYEQQARQPE MRAAAIRDGN ADVIQKPLLP QFESAEMRNL AETLLRDIIR GSPDVQWESI
101: KGLETAKRLL KEAVVMPIKY PKYFTGLLSP WKGILLFGPP GTGKTMLAKA VATECNTTFF NISASSIVSK WRGDSEKLVK VLFELARHHA PSTIFLDEID
201: AIISQRGEAR SEHEASRRLK TELLIQSYIH QFLLQMDGLT KTNDLVFVLA ATNLPWELDA AMLRRLEKRI LVPLPEAEAR QAMFKELLPA MTSNLEVPYD
301: ILVEKTEGYS GSDIRLVCKE AAMQPLRRLM SVLEASDELV PEEELPEVGP LKPEDVELAL SNTRPSAHLQ AHRYEKFNQD YGSHILS

Best Arabidopsis Sequence Match ( AT1G80350.1 )
(BLAST)

001: MVGSSNSLAG LQDHLKLARE YALEGSYDTS VIFFDGAIAQ INKHLNTLDD PLARTKWMNV KKAIMEETEV VKQLDAERRA FKEAPTGRRA ASPPINTKSS
101: FVFQPLDEYP TSSGGGPMDD PDVWRPPTRD VTSRRPARAG QTGTRKSPQD GAWARGPTTR TGPASRGGRG GATSKSTAGA RSSTAGKKGA ASKSNKAESM
201: NGDAEDGKSK RGLYEGPDED LAAMLERDVL DSTPGVRWDD VAGLSEAKRL LEEAVVLPLW MPEYFQGIRR PWKGVLMFGP PGTGKTLLAK AVATECGTTF
301: FNVSSATLAS KWRGESERMV RCLFDLARAY APSTIFIDEI DSLCNSRGGS GEHESSRRVK SELLVQVDGV SNTATNEDGS RKIVMVLAAT NFPWDIDEAL
401: RRRLEKRIYI PLPDFESRKA LININLRTVE VASDVNIEDV ARRTEGYSGD DLTNVCRDAS MNGMRRKIAG KTRDEIKNMS KDDISNDPVA MCDFEEAIRK
501: VQPSVSSSDI EKHEKWLSEF GSA

Arabidopsis Description

AAA1Katanin p60 ATPase-containing subunit A1 [Source:UniProtKB/TrEMBL;Acc:Q0WR11]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.