Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G423100.1 | Wheat | mitochondrion | 97.19 | 97.42 |
| TraesCS1D01G431700.1 | Wheat | mitochondrion | 96.37 | 96.71 |
| HORVU1Hr1G092440.13 | Barley | cytosol, golgi, mitochondrion, plastid | 90.4 | 89.04 |
| Os05t0584600-02 | Rice | vacuole | 82.44 | 82.34 |
| EES20020 | Sorghum | endoplasmic reticulum | 80.21 | 81.35 |
| Zm00001d009702_P001 | Maize | endoplasmic reticulum | 79.04 | 80.07 |
| TraesCS3B01G178200.1 | Wheat | cytosol, vacuole | 62.06 | 63.1 |
| GSMUA_Achr11P... | Banana | cytosol | 22.25 | 60.13 |
| TraesCS3B01G254800.2 | Wheat | cytosol | 54.57 | 57.89 |
| GSMUA_Achr11P... | Banana | cytosol | 20.61 | 55.52 |
| TraesCS1B01G120800.1 | Wheat | cytosol | 15.57 | 52.57 |
| TraesCS7B01G287800.1 | Wheat | golgi | 17.8 | 40.75 |
| TraesCS7B01G028300.1 | Wheat | cytosol | 32.2 | 34.85 |
| TraesCS3B01G305600.2 | Wheat | cytosol | 14.87 | 32.15 |
| TraesCS3B01G329000.2 | Wheat | cytosol | 14.29 | 31.52 |
| TraesCS2B01G132900.3 | Wheat | cytosol, plastid | 37.7 | 29.27 |
| TraesCS4B01G155600.1 | Wheat | cytosol | 37.0 | 28.73 |
| TraesCS3B01G299100.1 | Wheat | cytosol | 16.63 | 27.26 |
| TraesCS6B01G333700.1 | Wheat | mitochondrion | 30.8 | 26.86 |
| TraesCS7B01G089500.1 | Wheat | mitochondrion | 30.33 | 26.62 |
| TraesCS3B01G065200.1 | Wheat | cytosol | 13.58 | 26.48 |
| TraesCS6B01G161700.1 | Wheat | cytosol | 13.11 | 25.63 |
| TraesCS4B01G126300.7 | Wheat | nucleus | 37.7 | 25.6 |
| TraesCS5B01G110300.1 | Wheat | nucleus | 18.62 | 23.11 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G455200.1 | EnsemblPlantsGene:TraesCS1B01G455200 | Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | InterPro:P-loop_NTPase |
| ncoils:Coil | PANTHER:PTHR23074 | PANTHER:PTHR23074:SF107 | PFAM:PF00004 | ScanProsite:PS00674 | SEG:seg |
| SMART:SM00382 | SUPFAM:SSF52540 | TIGR:cd00009 | TMHMM:TMhelix | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr1B:+:670384217..670389742
Molecular Weight (calculated)
94426.0 Da
IEP (calculated)
6.000
GRAVY (calculated)
-0.472
Length
854 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQRSLLASA VGMGVGVGLG LASARWAKPA HAADGGSGAG AGAAEVEAEL RRLLLDGRDS EVTFDEFHHR HCYLSEQTKE VLISAAFVHL KQADLSKHIR
101: NLSAASRAIL LSGPTEAYLQ SLAKALSHYY KARLLLLDVT DFSLRIQSKY GGSSKALVQN QSVSETTFGR VSDFIGSFAM FPKKDEPRES LRRQTSSADS
201: RARGSDVASN DPLLRKNASM PSDMSDVGSQ CSVHSARRAS SWSFDEKVLI QSLYKVMISV AESEPIILYI RDVDHFLHRS QRTYTMFQKM LAKLSGQVLI
301: LGSRLLNSDA EYSDVDDRVS SLFPYHVDIK PPQEEIHLNG WKTQMEEDAR KIQIQDNRNH IVEVLSANDL DCDDLSSICQ ADTMVLSNYI EEIIVSAVSY
401: HLVHTKDPEY KNGKLLLSSK SLSHGLSIFQ ETGLGGKDTL KLEANEDGLK GAPGSKKPEN DKSPGKDGDA PPPKPEIPDN EFEKRIRPEV IPPSELGVTF
501: DDIGALADIK ESLQELVMLP LRRPDLFKGG GLLKPCRGIL LFGPPGTGKT MLAKAIANDA GASFINVSMS TITSKWFGED EKNVRALFSL AAKVAPTIIF
601: VDEVDSMLGQ RARCGEHEAM RKIKNEFMSH WDGILSKSGE RILVLAATNR PFDLDEAIIR RFERRIMVGL PTQDSRELIL RTVLSKEKVD KDIEYKELAT
701: MTEGYSGSDL KNLCVTAAYR PVRELLKKER LKEMERRKTE AEQKTAAAAE DSDKPENKKV SSDNKENNPE KVDSSDSKEG SSESKDDSSE TKAEGDKEAV
801: VDLRPLTMED LRQAKNQVAA SFAAEGAVMN ELKQWNDLYG EGGSRKKEQL TYFL
101: NLSAASRAIL LSGPTEAYLQ SLAKALSHYY KARLLLLDVT DFSLRIQSKY GGSSKALVQN QSVSETTFGR VSDFIGSFAM FPKKDEPRES LRRQTSSADS
201: RARGSDVASN DPLLRKNASM PSDMSDVGSQ CSVHSARRAS SWSFDEKVLI QSLYKVMISV AESEPIILYI RDVDHFLHRS QRTYTMFQKM LAKLSGQVLI
301: LGSRLLNSDA EYSDVDDRVS SLFPYHVDIK PPQEEIHLNG WKTQMEEDAR KIQIQDNRNH IVEVLSANDL DCDDLSSICQ ADTMVLSNYI EEIIVSAVSY
401: HLVHTKDPEY KNGKLLLSSK SLSHGLSIFQ ETGLGGKDTL KLEANEDGLK GAPGSKKPEN DKSPGKDGDA PPPKPEIPDN EFEKRIRPEV IPPSELGVTF
501: DDIGALADIK ESLQELVMLP LRRPDLFKGG GLLKPCRGIL LFGPPGTGKT MLAKAIANDA GASFINVSMS TITSKWFGED EKNVRALFSL AAKVAPTIIF
601: VDEVDSMLGQ RARCGEHEAM RKIKNEFMSH WDGILSKSGE RILVLAATNR PFDLDEAIIR RFERRIMVGL PTQDSRELIL RTVLSKEKVD KDIEYKELAT
701: MTEGYSGSDL KNLCVTAAYR PVRELLKKER LKEMERRKTE AEQKTAAAAE DSDKPENKKV SSDNKENNPE KVDSSDSKEG SSESKDDSSE TKAEGDKEAV
801: VDLRPLTMED LRQAKNQVAA SFAAEGAVMN ELKQWNDLYG EGGSRKKEQL TYFL
001: MLLSALGVGV GVGVGLGLAS GQAVGKWAGG NSSSNNAVTA DKMEKEILRQ VVDGRESKIT FDEFPYYLSE QTRVLLTSAA YVHLKHFDAS KYTRNLSPAS
101: RAILLSGPAE LYQQMLAKAL AHFFDAKLLL LDVNDFALKI QSKYGSGNTE SSSFKRSPSE SALEQLSGLF SSFSILPQRE ESKAGGTLRR QSSGVDIKSS
201: SMEGSSNPPK LRRNSSAAAN ISNLASSSNQ VSAPLKRSSS WSFDEKLLVQ SLYKVLAYVS KANPIVLYLR DVENFLFRSQ RTYNLFQKLL QKLSGPVLIL
301: GSRIVDLSSE DAQEIDEKLS AVFPYNIDIR PPEDETHLVS WKSQLERDMN MIQTQDNRNH IMEVLSENDL ICDDLESISF EDTKVLSNYI EEIVVSALSY
401: HLMNNKDPEY RNGKLVISSI SLSHGFSLFR EGKAGGREKL KQKTKEESSK EVKAESIKPE TKTESVTTVS SKEEPEKEAK AEKVTPKAPE VAPDNEFEKR
501: IRPEVIPAEE INVTFKDIGA LDEIKESLQE LVMLPLRRPD LFTGGLLKPC RGILLFGPPG TGKTMLAKAI AKEAGASFIN VSMSTITSKW FGEDEKNVRA
601: LFTLASKVSP TIIFVDEVDS MLGQRTRVGE HEAMRKIKNE FMSHWDGLMT KPGERILVLA ATNRPFDLDE AIIRRFERRI MVGLPAVENR EKILRTLLAK
701: EKVDENLDYK ELAMMTEGYT GSDLKNLCTT AAYRPVRELI QQERIKDTEK KKQREPTKAG EEDEGKEERV ITLRPLNRQD FKEAKNQVAA SFAAEGAGMG
801: ELKQWNELYG EGGSRKKEQL TYFL
101: RAILLSGPAE LYQQMLAKAL AHFFDAKLLL LDVNDFALKI QSKYGSGNTE SSSFKRSPSE SALEQLSGLF SSFSILPQRE ESKAGGTLRR QSSGVDIKSS
201: SMEGSSNPPK LRRNSSAAAN ISNLASSSNQ VSAPLKRSSS WSFDEKLLVQ SLYKVLAYVS KANPIVLYLR DVENFLFRSQ RTYNLFQKLL QKLSGPVLIL
301: GSRIVDLSSE DAQEIDEKLS AVFPYNIDIR PPEDETHLVS WKSQLERDMN MIQTQDNRNH IMEVLSENDL ICDDLESISF EDTKVLSNYI EEIVVSALSY
401: HLMNNKDPEY RNGKLVISSI SLSHGFSLFR EGKAGGREKL KQKTKEESSK EVKAESIKPE TKTESVTTVS SKEEPEKEAK AEKVTPKAPE VAPDNEFEKR
501: IRPEVIPAEE INVTFKDIGA LDEIKESLQE LVMLPLRRPD LFTGGLLKPC RGILLFGPPG TGKTMLAKAI AKEAGASFIN VSMSTITSKW FGEDEKNVRA
601: LFTLASKVSP TIIFVDEVDS MLGQRTRVGE HEAMRKIKNE FMSHWDGLMT KPGERILVLA ATNRPFDLDE AIIRRFERRI MVGLPAVENR EKILRTLLAK
701: EKVDENLDYK ELAMMTEGYT GSDLKNLCTT AAYRPVRELI QQERIKDTEK KKQREPTKAG EEDEGKEERV ITLRPLNRQD FKEAKNQVAA SFAAEGAGMG
801: ELKQWNELYG EGGSRKKEQL TYFL
Arabidopsis Description
p-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I5A3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.