Factsheet for TraesCS1A01G423100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G431700.1	Wheat	mitochondrion	97.3	97.41
TraesCS1B01G455200.1	Wheat	mitochondrion	97.42	97.19
HORVU1Hr1G092440.13	Barley	cytosol, golgi, mitochondrion, plastid	88.73	87.2
Os05t0584600-02	Rice	vacuole	82.75	82.46
EES20020	Sorghum	endoplasmic reticulum	80.52	81.47
Zm00001d009702_P001	Maize	endoplasmic reticulum	79.46	80.31
TraesCS3A01G151300.2	Wheat	cytosol, vacuole	62.56	63.45
GSMUA_Achr11P...	Banana	cytosol	22.18	59.81
TraesCS3A01G225200.3	Wheat	cytosol	54.93	57.99
GSMUA_Achr11P...	Banana	cytosol	20.66	55.52
TraesCS7A01G384900.1	Wheat	endoplasmic reticulum	17.96	41.02
TraesCS3A01G294400.1	Wheat	cytosol	14.2	32.01
TraesCS3A01G271900.1	Wheat	cytosol	14.91	31.75
TraesCS7A01G065800.1	Wheat	cytosol	17.61	31.25
TraesCS4A01G422400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	17.49	31.04
TraesCS2A01G113900.1	Wheat	cytosol	37.32	28.88
TraesCS4A01G142800.3	Wheat	cytosol	37.21	28.84
TraesCS7A01G128400.2	Wheat	cytosol, plastid	32.63	27.42
TraesCS3A01G265700.1	Wheat	cytosol	16.55	27.06
TraesCS6A01G305500.1	Wheat	mitochondrion	31.22	27.06
TraesCS7A01G184700.1	Wheat	mitochondrion	30.4	26.67
TraesCS3A01G054100.1	Wheat	cytosol	13.62	26.48
TraesCS4A01G169300.15	Wheat	plastid	37.79	26.12
TraesCS6A01G133300.1	Wheat	cytosol	13.38	26.03
TraesCS5A01G109500.1	Wheat	nucleus	18.43	22.82

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:P-loop_NTPase
PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF107	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1A01G423100	EnsemblPlants:TraesCS1A01G423100.1	TIGR:cd00009	SEG:seg	:

Description

No Description!

Coordinates

chr1A:+:578516212..578522067

Molecular Weight (calculated)

94042.7 Da

IEP (calculated)

6.091

GRAVY (calculated)

-0.440

Length

852 amino acids

Sequence
(BLAST)

001: MEQRSLLASA VGMGVGVGLG LASARWAKPA HAADGGSGAG AGAAEVEAEL RRLVVDGRDS EVTFDEFHHR HCYLSEQTKE VLISAAFVHL KQADLSKHIR
101: NLSAASRAIL LSGPTEAYLQ SLAKALSHYY KARLLLLDVT DFSLRIQSKY GGSSKALVQN QSASETTFGR VSDFIGSFAM FPKKDEPRES LRRQTSSADS
201: RARGSDVASN DPLLRKNASM PSDMSDVASQ CSVHSARRAS SWSFDEKVLI QSLYKVMISV AESDPIILYI RDVDHFLHRS QRIYSMFQKM LAKLSGQVLI
301: LGSRLLNSDA EYSDVDDRVS TLFPYHVDIK PPQEEIHLNG WKTQMEEDAR KIQIQDNRNH IVEVLSANDL DCDDLSSICQ ADTMVLSNYI EEIIVSAVSY
401: HLVHTNDPEY KNGKLLLSSK SLSHGLSIFQ ETGLGGKDTL KLEANEDGLK GAPGSKKPEN DKSPGKDGDA PPQKPEIPDN EFEKRIRPEV IPPSELGVTF
501: DDIGALADIK ESLQELVMLP LRRPDLFKGG GLLKPCRGIL LFGPPGTGKT MLAKAIANDA GASFINVSMS TITSKWFGED EKNVRALFSL AAKVAPTIIF
601: VDEVDSMLGQ RARCGEHEAM RKIKNEFMSH WDGILSKSGE RILVLAATNR PFDLDEAIIR RFERRIMVGL PTQDSRELIL RTVLSKEKVD KDIEYKELAT
701: MTEGYSGSDL KNLCVTAAYR PVRELLKKER LKEMERRKTE AKQKTAAAAE DSDKAESKKV SSENKDSSEK VDSDGKEGDS ESKVDASEAK AEGDKEAVVD
801: LRPLTMEDLR QAKNQVAASF AAEGAVMNEL KQWNDLYGEG GSRKKEQLTY FL

Best Arabidopsis Sequence Match ( AT1G64110.1 )
(BLAST)

001: MLLSALGVGV GVGVGLGLAS GQAVGKWAGG NSSSNNAVTA DKMEKEILRQ VVDGRESKIT FDEFPYYLSE QTRVLLTSAA YVHLKHFDAS KYTRNLSPAS
101: RAILLSGPAE LYQQMLAKAL AHFFDAKLLL LDVNDFALKI QSKYGSGNTE SSSFKRSPSE SALEQLSGLF SSFSILPQRE ESKAGGTLRR QSSGVDIKSS
201: SMEGSSNPPK LRRNSSAAAN ISNLASSSNQ VSAPLKRSSS WSFDEKLLVQ SLYKVLAYVS KANPIVLYLR DVENFLFRSQ RTYNLFQKLL QKLSGPVLIL
301: GSRIVDLSSE DAQEIDEKLS AVFPYNIDIR PPEDETHLVS WKSQLERDMN MIQTQDNRNH IMEVLSENDL ICDDLESISF EDTKVLSNYI EEIVVSALSY
401: HLMNNKDPEY RNGKLVISSI SLSHGFSLFR EGKAGGREKL KQKTKEESSK EVKAESIKPE TKTESVTTVS SKEEPEKEAK AEKVTPKAPE VAPDNEFEKR
501: IRPEVIPAEE INVTFKDIGA LDEIKESLQE LVMLPLRRPD LFTGGLLKPC RGILLFGPPG TGKTMLAKAI AKEAGASFIN VSMSTITSKW FGEDEKNVRA
601: LFTLASKVSP TIIFVDEVDS MLGQRTRVGE HEAMRKIKNE FMSHWDGLMT KPGERILVLA ATNRPFDLDE AIIRRFERRI MVGLPAVENR EKILRTLLAK
701: EKVDENLDYK ELAMMTEGYT GSDLKNLCTT AAYRPVRELI QQERIKDTEK KKQREPTKAG EEDEGKEERV ITLRPLNRQD FKEAKNQVAA SFAAEGAGMG
801: ELKQWNELYG EGGSRKKEQL TYFL

Arabidopsis Description

p-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I5A3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.