Factsheet for TraesCS4A01G422400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

mitochondrion 1
cytosol 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G060200.1	Wheat	cytosol	97.92	98.53
TraesCS7A01G065800.1	Wheat	cytosol	97.92	97.92
Os06t0130000-02	Rice	cytosol	90.62	89.32
EER87773	Sorghum	cytosol	88.12	86.33
Zm00001d045483_P002	Maize	cytosol	88.33	85.14
HORVU7Hr1G013190.8	Barley	plastid	96.25	82.65
CDY18925	Canola	plastid	54.17	71.82
Bra004917.1-P	Field mustard	cytosol	46.25	69.59
KRH40573	Soybean	cytosol, plastid	68.75	67.9
VIT_15s0048g01720.t01	Wine grape	cytosol	68.54	67.01
GSMUA_Achr10P...	Banana	cytosol	72.5	66.92
KRH00594	Soybean	cytosol, plastid	68.33	66.8
CDX74745	Canola	cytosol	65.62	66.32
AT2G45500.5	Thale cress	cytosol	67.5	65.19
Bra039332.1-P	Field mustard	cytosol	58.75	64.53
Solyc01g094150.2.1	Tomato	nucleus	65.62	64.15
CDY37046	Canola	cytosol	66.46	62.43
CDY27380	Canola	nucleus	66.67	43.13
TraesCS3A01G294400.1	Wheat	cytosol	30.42	38.62
TraesCS3A01G271900.1	Wheat	cytosol	30.42	36.5
TraesCS3A01G054100.1	Wheat	cytosol	31.67	34.7
TraesCS6A01G133300.1	Wheat	cytosol	30.83	33.79
TraesCS7A01G384900.1	Wheat	endoplasmic reticulum	23.96	30.83
TraesCS3A01G265700.1	Wheat	cytosol	31.04	28.6
TraesCS5A01G109500.1	Wheat	nucleus	36.67	25.58
TraesCS3A01G225200.3	Wheat	cytosol	32.5	19.33
TraesCS3A01G151300.2	Wheat	cytosol, vacuole	31.25	17.86
TraesCS1A01G423100.1	Wheat	mitochondrion	31.04	17.49
TraesCS7A01G184700.1	Wheat	mitochondrion	30.0	14.83
TraesCS6A01G305500.1	Wheat	mitochondrion	30.0	14.65
TraesCS7A01G128400.2	Wheat	cytosol, plastid	30.83	14.6
TraesCS2A01G113900.1	Wheat	cytosol	30.62	13.35
TraesCS4A01G142800.3	Wheat	cytosol	30.42	13.28
TraesCS4A01G169300.15	Wheat	plastid	31.46	12.25

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:50.3.6	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:MIT	InterPro:P-loop_NTPase
PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF86	SMART:SM00382	SMART:SM00745
SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS4A01G422400	EnsemblPlants:TraesCS4A01G422400.1	TIGR:cd00009	TIGR:cd02679	SEG:seg

Description

No Description!

Coordinates

chr4A:+:692546017..692551647

Molecular Weight (calculated)

53166.8 Da

IEP (calculated)

10.081

GRAVY (calculated)

-0.394

Length

480 amino acids

Sequence
(BLAST)

001: MSFLRALADS LSSLLFAPPP MDAAPSAAAV VGERVAVKLR GYFELAKEEI DKAVRAEEWG LPDDAEAHYR NALRVMLEAK AARVPDAVSS SERGQVRVYQ
101: DKIAKWQTQV EERLRVLGRR SGAAAPVPKK VVTNNQVNRP ERLASTSSRK SALQSNPTFN RGGQASSHQK NSVGGSKPVQ RAGGKDDDKL VEMINTTIVD
201: RSPSVRWDDV AGLDKAKQAL MEMVILPTKR RDLFTGLRRP AKGLLLFGPP GNGKTMLAKA VASESEATFF NVSASSLTSK WVGEAEKLVR TLFMVAVERQ
301: PSVIFMDEID SVMSTRLASE NDASRRLKSE FLIQFDGVTS NPDDLVIVIG ATNKPQELDD AVLRRLVKRI YVPLPDPNVR RLLLKNQLKG QAFKLSNHDL
401: ERLAVETEGY SGSDLRALCE EAAMMPIREL GPQNILTIKA NQLRPLRYED FRSAMTAIRP SLQKSKWDEL EKWNEEFGAS

Best Arabidopsis Sequence Match ( AT2G45500.1 )
(BLAST)

001: MSFLRGIIDS FSSILNEESK KDPSVSSSST SSESMNGIDG VPVTNERIAY KLKGYFDLAK EEIAKGVRAE EWGLHDDALL HYRNAQRIMN EATSTPSPSY
101: ISSSEKEKVR SYREKISNWQ NQVSERLQAL GKRTGVGMSE NKRTVAYPSS ASVSSTASRY RKTLSQKTPV ARGGVATPRN PKDAAASPKP VKESGNVYDD
201: KLVEMINTTI VDRSPSVKWD DVAGLNGAKQ ALLEMVILPA KRRDLFTGLR RPARGLLLFG PPGNGKTMLA KAVASESQAT FFNVSASSLT SKWVGEAEKL
301: VKTLFQVAIS RQPSVIFMDE IDSIMSTRST SENEASRRLK SEFLIQFDGV TSNPDDLVII IGATNKPQEL DDAVLRRLVK RIYVPLPDSN VRKLLFKTKL
401: KCQPHSLSDG DIDKIVKETE GYSGSDLQAL CEEAAMMPIR ELGANILTIQ ANKVRSLRYD DFRKSMAVIR PSLSKSKWEE LERWNSEFGS N

Arabidopsis Description

AAA-type ATPase family protein [Source:TAIR;Acc:AT2G45500]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.