Factsheet for Bra039332.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004917.1-P	Field mustard	cytosol	63.62	87.15
CDY37046	Canola	cytosol	97.25	83.17
AT2G45500.5	Thale cress	cytosol	84.44	74.25
KRH40573	Soybean	cytosol, plastid	70.71	63.58
KRH00594	Soybean	cytosol, plastid	70.48	62.73
VIT_15s0048g01720.t01	Wine grape	cytosol	68.42	60.9
TraesCS7D01G060200.1	Wheat	cytosol	64.3	58.91
TraesCS4A01G422400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.53	58.75
EER87773	Sorghum	cytosol	65.68	58.57
TraesCS7A01G065800.1	Wheat	cytosol	64.3	58.54
Os06t0130000-02	Rice	cytosol	64.76	58.11
Solyc01g094150.2.1	Tomato	nucleus	65.22	58.04
Zm00001d045483_P002	Maize	cytosol	65.9	57.83
GSMUA_Achr10P...	Banana	cytosol	61.56	51.73
HORVU7Hr1G013190.8	Barley	plastid	64.53	50.45
Bra018640.1-P	Field mustard	cytosol	29.75	30.23
Bra000503.1-P	Field mustard	cytosol	29.75	30.02
Bra012009.1-P	Field mustard	cytosol	29.52	29.79
Bra005414.1-P	Field mustard	cytosol	26.32	29.34
Bra003561.1-P	Field mustard	cytosol	30.43	25.05
Bra003048.1-P	Field mustard	endoplasmic reticulum	22.65	24.94
Bra008479.1-P	Field mustard	cytosol	29.75	24.62
Bra029063.1-P	Field mustard	endoplasmic reticulum	21.74	24.3
Bra026316.1-P	Field mustard	endoplasmic reticulum	21.28	23.72
Bra019030.1-P	Field mustard	endoplasmic reticulum, plasma membrane	21.05	23.47
Bra032982.1-P	Field mustard	plastid	33.87	22.84
Bra022979.1-P	Field mustard	plastid	26.32	19.93
Bra027756.1-P	Field mustard	endoplasmic reticulum	28.38	14.92
Bra029104.1-P	Field mustard	extracellular, plasma membrane	27.69	14.7
Bra024235.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	27.23	14.49
Bra003102.1-P	Field mustard	extracellular, plasma membrane	27.23	14.48
Bra026293.1-P	Field mustard	endoplasmic reticulum, extracellular	27.0	14.23
Bra014239.1-P	Field mustard	mitochondrion	27.69	12.11
Bra038230.1-P	Field mustard	cytosol, mitochondrion, plastid	27.0	11.9
Bra032579.1-P	Field mustard	plastid	26.77	10.2
Bra018548.1-P	Field mustard	plastid	28.38	10.17
Bra036265.1-P	Field mustard	plastid	29.29	9.92
Bra000878.1-P	Field mustard	plastid	28.38	9.9
Bra033356.1-P	Field mustard	cytosol, plastid	29.52	8.65

Protein Annotations

Gene3D:1.10.8.60	Gene3D:1.20.58.280	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core
EnsemblPlantsGene:Bra039332	EnsemblPlants:Bra039332.1	EnsemblPlants:Bra039332.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	UniProt:M4FE11	InterPro:MIT	InterPro:P-loop_NTPase	PFAM:PF00004	PANTHER:PTHR23074
PANTHER:PTHR23074:SF86	SMART:SM00382	SMART:SM00745	SUPFAM:SSF52540	UniParc:UPI000254426C	SEG:seg

Description

AT2G45500 (E=2e-153) | ATP binding / nucleoside-triphosphatase/ nucleotide binding

Coordinates

chrA04:-:18571966..18574577

Molecular Weight (calculated)

48319.4 Da

IEP (calculated)

9.505

GRAVY (calculated)

-0.473

Length

437 amino acids

Sequence
(BLAST)

001: MSFLRGIIDS FSSIFTEEED NTHRYEQSKH DRTVSTSSDS MNGVDGAVTV TNERVAYKLK GYFDLAKEEI SKGVRAEEWG LHDDALLHYR NAQRIMNEAT
101: STPSPSYITS SEKEKVRLYR EKISKWQSQV SGRLQALGKR TGVGMSENKR AVPSPSLASV PSSNRRVSLP RTSLPRGGTG VARSPKDATT TNPKPAKEAG
201: GGYDDKLVEM INTTIVDRSP SVKWDDVAGL DGAKQALMEM VILPAKRRDL FTGLRRPARG LLLFGPPGNG KTMLAKAVAS ESQATFFNVS ASSLTSKWVG
301: EAEKLVKTLF QVAISRQPSV IFMDEIDSIM STRSISENEA SRRLKSEFLI QFDGVTSNPD DLVIVIGYSG SDLQALCEEA AMMPIRELGA DILTIQANKV
401: RPLRYDDFRK SMGVIRPSLS KSKWEELERW NSEFGSN

Best Arabidopsis Sequence Match ( AT2G45500.1 )
(BLAST)

001: MSFLRGIIDS FSSILNEESK KDPSVSSSST SSESMNGIDG VPVTNERIAY KLKGYFDLAK EEIAKGVRAE EWGLHDDALL HYRNAQRIMN EATSTPSPSY
101: ISSSEKEKVR SYREKISNWQ NQVSERLQAL GKRTGVGMSE NKRTVAYPSS ASVSSTASRY RKTLSQKTPV ARGGVATPRN PKDAAASPKP VKESGNVYDD
201: KLVEMINTTI VDRSPSVKWD DVAGLNGAKQ ALLEMVILPA KRRDLFTGLR RPARGLLLFG PPGNGKTMLA KAVASESQAT FFNVSASSLT SKWVGEAEKL
301: VKTLFQVAIS RQPSVIFMDE IDSIMSTRST SENEASRRLK SEFLIQFDGV TSNPDDLVII IGATNKPQEL DDAVLRRLVK RIYVPLPDSN VRKLLFKTKL
401: KCQPHSLSDG DIDKIVKETE GYSGSDLQAL CEEAAMMPIR ELGANILTIQ ANKVRSLRYD DFRKSMAVIR PSLSKSKWEE LERWNSEFGS N

Arabidopsis Description

AAA-type ATPase family protein [Source:TAIR;Acc:AT2G45500]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.