Factsheet for Bra029104.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
extracellular 5
golgi 4
plasma membrane 5
endoplasmic reticulum 4
vacuole 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56163	Canola	extracellular, vacuole	97.69	99.88
CDY51824	Canola	extracellular, plasma membrane	97.21	99.26
AT5G52882.1	Thale cress	extracellular, vacuole	93.2	92.52
Bra003102.1-P	Field mustard	extracellular, plasma membrane	90.16	90.27
KRH08796	Soybean	cytosol	17.86	84.48
Bra026293.1-P	Field mustard	endoplasmic reticulum, extracellular	82.5	81.91
Bra024235.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	81.17	81.36
KRH38312	Soybean	endoplasmic reticulum	71.32	71.85
KRH08780	Soybean	extracellular, plasma membrane	71.08	71.6
PGSC0003DMT400051401	Potato	endoplasmic reticulum	71.69	71.08
Solyc03g007760.2.1	Tomato	endoplasmic reticulum	71.2	70.94
VIT_16s0050g01850.t01	Wine grape	endoplasmic reticulum, vacuole	71.93	70.73
KRH08789	Soybean	cytosol	28.68	70.45
Bra027756.1-P	Field mustard	endoplasmic reticulum	67.8	67.15
GSMUA_Achr9P05420_001	Banana	cytosol, mitochondrion	51.88	65.49
Os01t0226400-01	Rice	plasma membrane	66.34	65.0
Zm00001d008983_P001	Maize	vacuole	66.59	64.78
Zm00001d039315_P003	Maize	vacuole	65.74	64.33
TraesCS3D01G159200.1	Wheat	cytosol, vacuole	65.13	64.11
EES00021	Sorghum	endoplasmic reticulum	65.98	64.11
HORVU3Hr1G030770.20	Barley	cytosol, vacuole	65.49	64.09
TraesCS3B01G178200.1	Wheat	cytosol, vacuole	65.13	63.81
TraesCS3A01G151300.2	Wheat	cytosol, vacuole	65.01	63.69
Bra019030.1-P	Field mustard	endoplasmic reticulum, plasma membrane	19.68	41.33
Bra026316.1-P	Field mustard	endoplasmic reticulum	19.2	40.31
Bra003048.1-P	Field mustard	endoplasmic reticulum	18.47	38.29
Bra029063.1-P	Field mustard	endoplasmic reticulum	18.1	38.11
Bra005414.1-P	Field mustard	cytosol	15.67	32.91
Bra004917.1-P	Field mustard	cytosol	12.64	32.6
Bra012009.1-P	Field mustard	cytosol	15.19	28.87
Bra000503.1-P	Field mustard	cytosol	15.07	28.64
Bra018640.1-P	Field mustard	cytosol	14.82	28.37
Bra039332.1-P	Field mustard	cytosol	14.7	27.69
Bra018548.1-P	Field mustard	plastid	39.37	26.58
Bra014239.1-P	Field mustard	mitochondrion	32.2	26.53
Bra032579.1-P	Field mustard	plastid	36.57	26.24
Bra000878.1-P	Field mustard	plastid	39.61	26.04
Bra003561.1-P	Field mustard	cytosol	16.77	25.99
Bra008479.1-P	Field mustard	cytosol	16.65	25.95
Bra036265.1-P	Field mustard	plastid	40.22	25.66
Bra038230.1-P	Field mustard	cytosol, mitochondrion, plastid	30.86	25.6
Bra032982.1-P	Field mustard	plastid	18.71	23.77
Bra022979.1-P	Field mustard	plastid	16.04	22.88
Bra033356.1-P	Field mustard	cytosol, plastid	38.76	21.39

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
EnsemblPlantsGene:Bra029104	EnsemblPlants:Bra029104.1	EnsemblPlants:Bra029104.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	UniProt:M4EJY7	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074
PANTHER:PTHR23074:SF98	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000254005E	SEG:seg

Description

AT5G52882 (E=0.0) | ATP binding / nucleoside-triphosphatase/ nucleotide binding

Coordinates

chrA03:+:6377975..6382210

Molecular Weight (calculated)

92284.1 Da

IEP (calculated)

5.866

GRAVY (calculated)

-0.497

Length

823 amino acids

Sequence
(BLAST)

001: MEQKSVLLSA LGVGVGLGIG LASGQSLGRW ANGPGSVEDD LTGEQIEQEL VRQIIDGRES TVTFDEFPYF LSERTRVLLT SSAYVHLKES DISKHTRNLA
101: PASKAILLSG PAEFYQQMLA KALSHYCESK LLLLDITDFS IKIQSKYGCT KKEPFHKRSI SELTLDKVSS LMGSFSMLSQ REVDPRGTLR RHTSGNDLKS
201: RSIETSNRPP KHKRYASAAP DISSSISSVS GCNKRSTNLC FDEKLFLQSL YKVLVSVSAT TPLIVYLRDV EKLLESERFY KLFQRLLNKL SGPVLILGSR
301: VLEPEDDCQE VSERTSSLFP YNIEIKPPED ESQLMSWKSR LEDDMKMIQF QDNKNHIAEV LAANDIECDD LASICHADTM CLSNHIDEVV VSAITYHLIH
401: TKEPEYRNGK LVISSKSLSH GLSIFQEGGS RSLELDTNTD YKRKGGEVCS KSESKPESSG PENKNELEKS LPSNKNDNPS PPKAPEVVPD NEFEKRIRPE
501: VIPANEIGVT FADIGSLDET KDSLQELVML PLRRPDLFKG GLLKPCRGIL LFGPPGTGKT MLAKAIANEA GASFINVSMS TITSKWFGED EKNVRALFTL
601: AAKVSPTIIF VDEVDSMLGQ RTRVGEHEAM RKIKNEFMTH WDGLMTKPGE RILVLAATNR PFDLDEAIIR RFERRIMVGL PSIESREKIL RTLLSKEKTD
701: ELDFHELGQM TEGYSGSDLK NLCITAAYRP VRELIQQERL KDQERKKREE AGKGTEETKE EEEASEEREI VLRPLNMEDM RKAKNQVGAS FASEGSGMNE
801: LKQWNDLYGE GGSRKKEQLT YFL

Best Arabidopsis Sequence Match ( AT5G52882.1 )
(BLAST)

001: MEQKSVLLSA LGVGVGLGIG LASGQSLGRW ANGSGSVEDG LTGEQIEQEL IRQIVDGRES TVTFEEFPYF LSKRTRELLT SVAYVHLKEY DISKHTRNLA
101: PASKAILLSG PAEFYQQMLA KALSHYFESK LLLLDITDFS IKIQSKYGCT KREPFHKRSI SELTLDKVSS LMGSFSMLSQ REVEPRGTLR RHTSGNDLKS
201: RSTESSNRLP RHKRNASAAS DISSISSRSS SSVSASRKRT TNLCFDEKLF LQSLYKVLSS VSETTPLIIY LRDVEKLLES ERFYKLFQRL LNKLSGPVLI
301: LGSRVLEPED DCQEVDESIS ALFPYNIEIR PPEDESQLVS WKSRLEDDMK MIQFQDNKNH IAEVLAANDI QCDDLSSICH ADTMCLSNHI EEIVVSAITY
401: HLIHTKEPEY RNGKLVISSK SLSHGLSIFQ EGGNRSFEDS LKLDTNTDSK RKGGEVCSKS ESKSGPENKN ESEISLPSNK NDNPLPPKAP EVVPDNEFEK
501: RIRPEVIPAN EIGVTFADIG SLDETKDSLQ ELVMLPLRRP DLFQGGLLKP CRGILLFGPP GTGKTMLAKA IANEAGASFI NVSMSTITSK WFGEDEKNVR
601: ALFTLAAKVS PTIIFVDEVD SMLGQRTRVG EHEAMRKIKN EFMTHWDGLM TKPGERILVL AATNRPFDLD EAIIRRFERR IMVGLPSIES REKILRTLLS
701: KEKTENLDFH ELGQITEGYS GSDLKNLCIT AAYRPVRELI QQERLKDQER KKREEAGKGT EESKEEEAEA SEERVITLRP LNMEDMRKAK TQVAASFASE
801: GAGMNELKQW NDLYGEGGSR KKEQLTYFL

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KHN5]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.