Factsheet for TraesCS3D01G159200.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, vacuole
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G178200.1	Wheat	cytosol, vacuole	98.09	97.62
TraesCS3A01G151300.2	Wheat	cytosol, vacuole	97.37	96.9
HORVU3Hr1G030770.20	Barley	cytosol, vacuole	96.77	96.19
Os01t0226400-01	Rice	plasma membrane	85.89	85.48
EES00021	Sorghum	endoplasmic reticulum	84.57	83.47
KRH08796	Soybean	cytosol	17.22	82.76
Zm00001d008983_P001	Maize	vacuole	83.73	82.74
Zm00001d039315_P003	Maize	vacuole	82.06	81.57
VIT_02s0025g00650.t01	Wine grape	endoplasmic reticulum, vacuole	69.62	69.62
PGSC0003DMT400031731	Potato	cytosol, endoplasmic reticulum	68.18	68.35
Solyc08g081740.2.1	Tomato	unclear	67.7	67.7
VIT_16s0050g01850.t01	Wine grape	endoplasmic reticulum, vacuole	67.7	67.62
GSMUA_Achr7P14270_001	Banana	cytosol	57.18	67.61
AT1G64110.2	Thale cress	cytosol	66.99	67.55
KRH38312	Soybean	endoplasmic reticulum	65.79	67.32
CDY08360	Canola	endoplasmic reticulum	66.87	67.27
KRH08780	Soybean	extracellular, plasma membrane	65.55	67.07
CDY38192	Canola	plasma membrane	66.51	66.91
Bra027756.1-P	Field mustard	endoplasmic reticulum	66.51	66.91
CDY49165	Canola	extracellular, plasma membrane	62.44	66.84
CDY19639	Canola	extracellular, vacuole	63.76	66.38
KRH27876	Soybean	cytosol	66.27	66.03
CDY51824	Canola	extracellular, plasma membrane	63.64	66.0
CDY56163	Canola	extracellular, vacuole	63.52	65.96
AT5G52882.1	Thale cress	extracellular, vacuole	65.07	65.62
KRH59989	Soybean	endoplasmic reticulum	65.91	65.6
KRH41256	Soybean	extracellular	66.87	65.53
Bra003102.1-P	Field mustard	extracellular, plasma membrane	64.35	65.45
KRH77598	Soybean	endoplasmic reticulum	65.55	65.32
Bra029104.1-P	Field mustard	extracellular, plasma membrane	64.11	65.13
KRH08789	Soybean	cytosol	26.08	65.07
AT4G28000.2	Thale cress	extracellular	64.71	65.02
Bra026293.1-P	Field mustard	endoplasmic reticulum, extracellular	64.47	65.02
Bra024235.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	63.64	64.8
Solyc03g007760.2.1	Tomato	endoplasmic reticulum	63.52	64.29
PGSC0003DMT400051401	Potato	endoplasmic reticulum	63.52	63.98
TraesCS1D01G431700.1	Wheat	mitochondrion	63.52	62.4
CDX89214	Canola	extracellular, plasma membrane	56.46	62.27
CDY19014	Canola	endoplasmic reticulum, extracellular	51.79	60.31
CDY29873	Canola	endoplasmic reticulum, extracellular, plasma membrane	50.24	59.91
CDX92857	Canola	endoplasmic reticulum, extracellular, plasma membrane	50.36	59.8
CDX96166	Canola	cytosol	48.21	59.35
TraesCS3D01G228100.4	Wheat	cytosol	51.44	53.55
TraesCS7D01G381400.1	Wheat	endoplasmic reticulum	17.7	39.78
TraesCS7D01G060200.1	Wheat	cytosol	18.06	31.66
TraesCS3D01G271500.1	Wheat	cytosol	15.07	31.5
TraesCS3D01G294200.1	Wheat	plastid	15.07	28.44
TraesCS3D01G053600.1	Wheat	cytosol	14.83	28.31
TraesCS7D01G127200.1	Wheat	cytosol	33.25	28.14
TraesCS6D01G284600.1	Wheat	mitochondrion	32.78	27.87
TraesCS6D01G122900.1	Wheat	cytosol	14.47	27.69
TraesCS4D01G168600.1	Wheat	cytosol	36.48	27.55
TraesCS2D01G114500.1	Wheat	cytosol, plastid	37.08	27.34
TraesCS7D01G186200.1	Wheat	mitochondrion	31.7	27.26
TraesCS3D01G265900.1	Wheat	cytosol	16.87	27.06
TraesCS4D01G145100.12	Wheat	plastid	38.28	26.06
TraesCS5D01G123800.1	Wheat	nucleus	19.02	23.11

Protein Annotations

EnsemblPlants:TraesCS3D01G159200.1	EnsemblPlantsGene:TraesCS3D01G159200	Gene3D:1.10.8.60	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase
ncoils:Coil	PANTHER:PTHR23074	PANTHER:PTHR23074:SF98	PFAM:PF00004	ScanProsite:PS00674	SEG:seg
SMART:SM00382	SUPFAM:SSF52540	TIGR:cd00009	TMHMM:TMhelix	MapMan:35.1	:

Description

No Description!

Coordinates

chr3D:-:128544540..128550334

Molecular Weight (calculated)

93266.9 Da

IEP (calculated)

8.181

GRAVY (calculated)

-0.400

Length

836 amino acids

Sequence
(BLAST)

001: MEGKHMVMSA VGIGIGVGVG LGLASAPWSG GGSGGPARAG VTLERVEHEL RRLVVDGRDS KVTFDEFPYY LSEQTRVVLT SAAYVHLKQA EISKYTRNLA
101: PASRAILLSG PAELYQQMLA KALAHYFEAK ILLLDPTDFL IKLHGKYGTG GSEQSVTRSI SETTLEKMSG LLQSFTMTPQ KEQSRGGMRR QNSMTDMKLR
201: SSESTNSIPR LRRNASTSSD MSSLASQGPP SNSAPLRRAS SWTFDEKMLV QALYKILHKV SKKSPIVLYI RDVEKFLHKS PKMYLLFEKL LTKLEGPVLL
301: LGSRIVDMDF DDDELDDRLS ALFPYSIDIK PPENENCLVS WNSQLEEDMK IIQFQDNRNH ITEVLAENDL ECLDLGSICL SDTMGLSKYI EEIVVSAVSY
401: HLMNHKDPEY RNGKLILSAK SLSHALEIFQ ENKMSDKDTM KLERHTDARK GIVPTAAKLE TKPATLLPPA APAAATPAPP LESKTEPKKP ENPPPPAKLP
501: EVPPDNEFEK RIRPEVIPAN EIGVSFDDIG ALEDIKESLQ ELVMLPLRRP DLFKGGLLKP CRGILLFGPP GTGKTMLAKA IANEAQASFI NVSMSTITSK
601: WFGEDEKNVR ALFTLAAKVS PTIIFVDEVD SMLGQRNRAG EHEAMRKIKN EFMTHWDGLL SRPDQKILVL AATNRPFDLD EAIIRRFERR IMVGLPSVQN
701: REMIMKRLLS KEKVDEGLDY KELATMTEGY SGSDLKNLCT TAAYRPVREL IQKERKKELE KKKLEKGGTP LDPSKMKEKD KEVILRPLNM ADLKEAKTQV
801: AASFAAEGSI MGELKQWNDL YGEGGSRKKE QLTYFL

Best Arabidopsis Sequence Match ( AT1G64110.1 )
(BLAST)

001: MLLSALGVGV GVGVGLGLAS GQAVGKWAGG NSSSNNAVTA DKMEKEILRQ VVDGRESKIT FDEFPYYLSE QTRVLLTSAA YVHLKHFDAS KYTRNLSPAS
101: RAILLSGPAE LYQQMLAKAL AHFFDAKLLL LDVNDFALKI QSKYGSGNTE SSSFKRSPSE SALEQLSGLF SSFSILPQRE ESKAGGTLRR QSSGVDIKSS
201: SMEGSSNPPK LRRNSSAAAN ISNLASSSNQ VSAPLKRSSS WSFDEKLLVQ SLYKVLAYVS KANPIVLYLR DVENFLFRSQ RTYNLFQKLL QKLSGPVLIL
301: GSRIVDLSSE DAQEIDEKLS AVFPYNIDIR PPEDETHLVS WKSQLERDMN MIQTQDNRNH IMEVLSENDL ICDDLESISF EDTKVLSNYI EEIVVSALSY
401: HLMNNKDPEY RNGKLVISSI SLSHGFSLFR EGKAGGREKL KQKTKEESSK EVKAESIKPE TKTESVTTVS SKEEPEKEAK AEKVTPKAPE VAPDNEFEKR
501: IRPEVIPAEE INVTFKDIGA LDEIKESLQE LVMLPLRRPD LFTGGLLKPC RGILLFGPPG TGKTMLAKAI AKEAGASFIN VSMSTITSKW FGEDEKNVRA
601: LFTLASKVSP TIIFVDEVDS MLGQRTRVGE HEAMRKIKNE FMSHWDGLMT KPGERILVLA ATNRPFDLDE AIIRRFERRI MVGLPAVENR EKILRTLLAK
701: EKVDENLDYK ELAMMTEGYT GSDLKNLCTT AAYRPVRELI QQERIKDTEK KKQREPTKAG EEDEGKEERV ITLRPLNRQD FKEAKNQVAA SFAAEGAGMG
801: ELKQWNELYG EGGSRKKEQL TYFL

Arabidopsis Description

p-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I5A3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.