Factsheet for VIT_02s0025g00650.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

nucleus 2
mitochondrion 2
extracellular 3
golgi 3
plasma membrane 3
endoplasmic reticulum 4
vacuole 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0050g01850.t01	Wine grape	endoplasmic reticulum, vacuole	76.91	76.82
Solyc08g081740.2.1	Tomato	unclear	75.48	75.48
PGSC0003DMT400031731	Potato	cytosol, endoplasmic reticulum	75.24	75.42
KRH41256	Soybean	extracellular	76.79	75.26
AT1G64110.2	Thale cress	cytosol	74.52	75.15
CDY08360	Canola	endoplasmic reticulum	74.64	75.09
KRH59989	Soybean	endoplasmic reticulum	75.36	75.0
CDY38192	Canola	plasma membrane	74.16	74.61
Bra027756.1-P	Field mustard	endoplasmic reticulum	74.04	74.49
KRH27876	Soybean	cytosol	74.52	74.26
KRH77598	Soybean	endoplasmic reticulum	74.16	73.9
VIT_16s0050g01830.t01	Wine grape	endoplasmic reticulum, vacuole	67.46	72.12
Os01t0226400-01	Rice	plasma membrane	70.81	70.48
EES00021	Sorghum	endoplasmic reticulum	71.17	70.25
TraesCS3B01G178200.1	Wheat	cytosol, vacuole	70.57	70.24
Zm00001d008983_P001	Maize	vacuole	70.93	70.09
TraesCS3A01G151300.2	Wheat	cytosol, vacuole	70.33	70.0
TraesCS3D01G159200.1	Wheat	cytosol, vacuole	69.62	69.62
HORVU3Hr1G030770.20	Barley	cytosol, vacuole	69.86	69.44
Zm00001d039315_P003	Maize	vacuole	69.74	69.32
VIT_16s0050g01840.t01	Wine grape	cytosol, golgi, plasma membrane	65.19	67.87
VIT_10s0003g03500.t01	Wine grape	cytosol	15.67	33.0
VIT_15s0048g01720.t01	Wine grape	cytosol	18.06	30.75
VIT_06s0080g00160.t01	Wine grape	extracellular	14.71	28.41
VIT_17s0000g01550.t01	Wine grape	cytosol, plastid	41.27	28.37
VIT_01s0011g02220.t01	Wine grape	cytosol, mitochondrion, plastid	33.73	28.2
VIT_13s0106g00490.t01	Wine grape	cytosol	14.59	28.11
VIT_09s0002g05260.t01	Wine grape	cytosol	16.99	27.26
VIT_07s0005g00200.t01	Wine grape	plastid	41.27	26.81
VIT_14s0068g02130.t01	Wine grape	nucleus	19.5	24.4
VIT_16s0098g01260.t01	Wine grape	endoplasmic reticulum	19.62	21.24

Protein Annotations

Gene3D:1.10.8.60	EntrezGene:100244958	wikigene:100244958	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	ProteinID:CBI34411	ProteinID:CBI34411.3	UniProt:D7TV86	EMBL:FN596251
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0016787	GO:GO:0016887	EntrezGene:LOC100244958
wikigene:LOC100244958	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF98
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00015CD13E	ArrayExpress:VIT_02s0025g00650	EnsemblPlantsGene:VIT_02s0025g00650
EnsemblPlants:VIT_02s0025g00650.t01	RefSeq:XP_002276971	RefSeq:XP_002276971.1	RefSeq:XP_003631431	RefSeq:XP_003631431.1	SEG:seg

Description

No Description!

Coordinates

chr2:-:708337..719214

Molecular Weight (calculated)

92981.3 Da

IEP (calculated)

5.798

GRAVY (calculated)

-0.366

Length

836 amino acids

Sequence
(BLAST)

001: MEQKHILLSA LSVGVGVGVG LGLASGQTVS RWTGSGSGSS DALTAEKMEQ ELLRQVVEGR ESKVTFDEFP YYLSEQTRVL LTSAAYVHLK QAEFSKYTRN
101: LSPASRAILL SGPAELYQQM LAKALAHYFE AKLLLLDVTD FSLKIQNKYG SASKESSMKR SISTTTLERV SSLLGSLSLI PQMEESKGTL RRQSSGMDIA
201: SRGRDCSCNP PKIRRNASAS ANMNNMASQF APYPAPLKRT SSWSFDEKLL IQSLYKVLVS VSKTSPLVLY IRDVEKLLSR SQRIYNLFQK MLNKLSGSIL
301: ILGSQIIDPD DDYGDVDQRL TALFPYNIEI RPPEDENHFV SWKTQLEEDM KMIQLQDNKN HIIEVLAAND LDCRDLDSIC LEDTMVLSNY IEEIVVSAVS
401: YHLMNNKDHE YKNGKLVISS KSLAHGLSLF QEGKSGSKDT SKLEAHAEPS KEAGGEEGAG VKPAAKAEST APENKNEAGS LIVAVKEGDN PIPASKAPEV
501: PPDNEFEKRI RPEVIPASEI GVTFADIGAM DEIKESLQEL VMLPLRRPDL FEGGLLKPCR GILLFGPPGT GKTMLAKAIA NEAGASFINV SMSTITSKWF
601: GEDEKNVRAL FTLAAKVSPT IIFVDEVDSM LGQRTRVGEH EAMRKIKNEF MTHWDGLLTK PGERILVLAA TNRPFDLDEA IIRRFERRIM VGLPSVENRE
701: MIMKTLLSKE KVAEGLDFKE LATMTEGYSG SDLKNLCTTA AYRPVRELIQ QERLKDLEKK RRAEQRLSPD DDDVFEDTEE RVITLRPLNM EDFRHAKNQV
801: AASFAAEGSI MSELKQWNDS YGEGGSRKKQ QLSYFL

Best Arabidopsis Sequence Match ( AT1G64110.4 )
(BLAST)

001: MDSKQMLLSA LGVGVGVGVG LGLASGQAVG KWAGGNSSSN NAVTADKMEK EILRQVVDGR ESKITFDEFP YYLSEQTRVL LTSAAYVHLK HFDASKYTRN
101: LSPASRAILL SGPAELYQQM LAKALAHFFD AKLLLLDVND FALKIQSKYG SGNTESSSFK RSPSESALEQ LSGLFSSFSI LPQREESKAG GTLRRQSSGV
201: DIKSSSMEGS SNPPKLRRNS SAAANISNLA SSSNQVSAPL KRSSSWSFDE KLLVQSLYKV LAYVSKANPI VLYLRDVENF LFRSQRTYNL FQKLLQKLSG
301: PVLILGSRIV DLSSEDAQEI DEKLSAVFPY NIDIRPPEDE THLVSWKSQL ERDMNMIQTQ DNRNHIMEVL SENDLICDDL ESISFEDTKV LSNYIEEIVV
401: SALSYHLMNN KDPEYRNGKL VISSISLSHG FSLFREGKAG GREKLKQKTK EESSKEVKAE SIKPETKTES VTTVSSKEEP EKEAKAEKVT PKAPEVAPDN
501: EFEKRIRPEV IPAEEINVTF KDIGALDEIK ESLQELVMLP LRRPDLFTGG LLKPCRGILL FGPPGTGKTM LAKAIAKEAG ASFINVSMST ITSKWFGEDE
601: KNVRALFTLA SKVSPTIIFV DEVDSMLGQR TRVGEHEAMR KIKNEFMSHW DGLMTKPGER ILVLAATNRP FDLDEAIIRR FERRIMVGLP AVENREKILR
701: TLLAKEKVDE NLDYKELAMM TEGYTGSDLK NLCTTAAYRP VRELIQQERI KDTEKKKQRE PTKAGEEDEG KEERVITLRP LNRQDFKEAK NQVAASFAAE
801: GAGMGELKQW NELYGEGGSR KKEQLTYFL

Arabidopsis Description

p-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I5A3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.