Factsheet for TraesCS3B01G178200.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, vacuole
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G159200.1	Wheat	cytosol, vacuole	97.62	98.09
TraesCS3A01G151300.2	Wheat	cytosol, vacuole	97.26	97.26
HORVU3Hr1G030770.20	Barley	cytosol, vacuole	96.31	96.19
Os01t0226400-01	Rice	plasma membrane	85.6	85.6
EES00021	Sorghum	endoplasmic reticulum	85.24	84.53
Zm00001d008983_P001	Maize	vacuole	84.05	83.45
KRH08796	Soybean	cytosol	17.14	82.76
Zm00001d039315_P003	Maize	vacuole	82.62	82.52
VIT_02s0025g00650.t01	Wine grape	endoplasmic reticulum, vacuole	70.24	70.57
PGSC0003DMT400031731	Potato	cytosol, endoplasmic reticulum	68.33	68.82
VIT_16s0050g01850.t01	Wine grape	endoplasmic reticulum, vacuole	68.21	68.46
Solyc08g081740.2.1	Tomato	unclear	67.98	68.3
GSMUA_Achr7P14270_001	Banana	cytosol	57.26	68.03
AT1G64110.2	Thale cress	cytosol	67.14	68.03
CDY08360	Canola	endoplasmic reticulum	67.14	67.87
KRH38312	Soybean	endoplasmic reticulum	65.95	67.81
Bra027756.1-P	Field mustard	endoplasmic reticulum	66.79	67.51
CDY38192	Canola	plasma membrane	66.79	67.51
KRH08780	Soybean	extracellular, plasma membrane	65.6	67.44
KRH27876	Soybean	cytosol	66.31	66.39
CDY49165	Canola	extracellular, plasma membrane	61.67	66.33
CDY19639	Canola	extracellular, vacuole	63.33	66.25
CDY56163	Canola	extracellular, vacuole	63.33	66.09
KRH59989	Soybean	endoplasmic reticulum	65.95	65.95
KRH41256	Soybean	extracellular	66.9	65.89
CDY51824	Canola	extracellular, plasma membrane	63.21	65.88
KRH77598	Soybean	endoplasmic reticulum	65.6	65.67
AT5G52882.1	Thale cress	extracellular, vacuole	64.29	65.14
Bra029104.1-P	Field mustard	extracellular, plasma membrane	63.81	65.13
Bra003102.1-P	Field mustard	extracellular, plasma membrane	63.57	64.96
AT4G28000.2	Thale cress	extracellular	64.29	64.9
Bra026293.1-P	Field mustard	endoplasmic reticulum, extracellular	64.05	64.9
Solyc03g007760.2.1	Tomato	endoplasmic reticulum	63.81	64.89
KRH08789	Soybean	cytosol	25.83	64.78
Bra024235.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	63.21	64.68
PGSC0003DMT400051401	Potato	endoplasmic reticulum	63.81	64.58
CDX89214	Canola	extracellular, plasma membrane	56.07	62.14
TraesCS1B01G455200.1	Wheat	mitochondrion	63.1	62.06
CDY19014	Canola	endoplasmic reticulum, extracellular	51.43	60.17
CDY29873	Canola	endoplasmic reticulum, extracellular, plasma membrane	49.88	59.77
CDX92857	Canola	endoplasmic reticulum, extracellular, plasma membrane	50.0	59.66
CDX96166	Canola	cytosol	48.21	59.65
TraesCS3B01G254800.2	Wheat	cytosol	50.83	53.04
TraesCS1B01G120800.1	Wheat	cytosol	15.24	50.59
TraesCS7B01G287800.1	Wheat	golgi	17.26	38.87
TraesCS7B01G028300.1	Wheat	cytosol	32.62	34.73
TraesCS3B01G329000.2	Wheat	cytosol	14.88	32.3
TraesCS3B01G305600.2	Wheat	cytosol	14.88	31.65
TraesCS2B01G132900.3	Wheat	cytosol, plastid	37.26	28.45
TraesCS3B01G065200.1	Wheat	cytosol	14.76	28.31
TraesCS6B01G333700.1	Wheat	mitochondrion	32.26	27.68
TraesCS4B01G155600.1	Wheat	cytosol	36.07	27.55
TraesCS6B01G161700.1	Wheat	cytosol	14.29	27.46
TraesCS3B01G299100.1	Wheat	cytosol	16.9	27.26
TraesCS7B01G089500.1	Wheat	mitochondrion	31.55	27.24
TraesCS4B01G126300.7	Wheat	nucleus	38.1	25.44
TraesCS5B01G110300.1	Wheat	nucleus	18.93	23.11

Protein Annotations

EnsemblPlants:TraesCS3B01G178200.1	EnsemblPlantsGene:TraesCS3B01G178200	Gene3D:1.10.8.60	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase
PANTHER:PTHR23074	PANTHER:PTHR23074:SF98	PFAM:PF00004	ScanProsite:PS00674	SEG:seg	SMART:SM00382
SUPFAM:SSF52540	TIGR:cd00009	TMHMM:TMhelix	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr3B:-:182382669..182389142

Molecular Weight (calculated)

93810.5 Da

IEP (calculated)

8.181

GRAVY (calculated)

-0.409

Length

840 amino acids

Sequence
(BLAST)

001: MEGKHMVMSA VGIGIGVGVG LGLASAPWSG GGSGGPARAG VTLERVEHEL RRLVVDGRDS KVTFDEFPYY LSEQTRVVLT SAAYVHLKQA EISKYTRNLA
101: PASRAILLSG PAELYQQMLA KALAHYFEAK ILLLDPTDFL IKLHGKYGTG GSEQSVTRSI SETTLERMSG LLQSFTMTPQ KEQSRGGIRR QSSMTDMKLR
201: SSESTNSMPK LRRNASTSSD MSSLASQGAP SNSAPLRRAS SWNFDEKMLV QALYKILHKV SKKSPIVLYI RDVEKFLHKS PKMYLLFEKL LTKLEGPVLL
301: LGSRIVDMDF DDDELDDRLS ALFPYNIDIK PPENENCLVS WNSQLEEDMK IIQFQDNRNH ITEVLAENDL ECLDLGSICL SDTMGLSKYI EEIVVSAVSY
401: HLMNHKDPEY RNGKLILSAK SLAHALEIFQ ENKMSDKDTM KLERHTDARK ISEKRIAPTA AKLETKPATL LPPAAPAAAT PAPPPESKTE PKKPENPPPP
501: AKLPEVPPDN EFEKRIRPEV IPANEIGVSF DDIGALEDIK ESLQELVMLP LRRPDLFKGG LLKPCRGILL FGPPGTGKTM LAKAIANEAQ ASFINVSMST
601: ITSKWFGEDE KNVRALFTLA AKVSPTIIFV DEVDSMLGQR NRAGEHEAMR KIKNEFMTHW DGLLSRPDQK ILVLAATNRP FDLDEAIIRR FERRIMVGLP
701: SVQNREMIMK RLLSKEKVDE SLDYKELATM TEGYSGSDLK NLCTTAAYRP VRELIQKERK KELEKMKLEK GGTPLDPSKM KEKDKEIILR PLNMADLKEA
801: KNQVAASFAA EGSIMGELKQ WNDLYGEGGS RKKEQLTYFL

Best Arabidopsis Sequence Match ( AT1G64110.3 )
(BLAST)

001: MDSKQMLLSA LGVGVGVGVG LGLASGQAVG KWAGGNSSSN NAVTADKMEK EILRQVVDGR ESKITFDEFP YYLSEQTRVL LTSAAYVHLK HFDASKYTRN
101: LSPASRAILL SGPAELYQQM LAKALAHFFD AKLLLLDVND FALKIQSKYG SGNTESSSFK RSPSESALEQ LSGLFSSFSI LPQREESKAG GTLRRQSSGV
201: DIKSSSMEGS SNPPKLRRNS SAAANISNLA SSSNQAPLKR SSSWSFDEKL LVQSLYKVLA YVSKANPIVL YLRDVENFLF RSQRTYNLFQ KLLQKLSGPV
301: LILGSRIVDL SSEDAQEIDE KLSAVFPYNI DIRPPEDETH LVSWKSQLER DMNMIQTQDN RNHIMEVLSE NDLICDDLES ISFEDTKVLS NYIEEIVVSA
401: LSYHLMNNKD PEYRNGKLVI SSISLSHGFS LFREGKAGGR EKLKQKTKEE SSKEVKAESI KPETKTESVT TVSSKEEPEK EAKAEKVTPK APEVAPDNEF
501: EKRIRPEVIP AEEINVTFKD IGALDEIKES LQELVMLPLR RPDLFTGGLL KPCRGILLFG PPGTGKTMLA KAIAKEAGAS FINVSMSTIT SKWFGEDEKN
601: VRALFTLASK VSPTIIFVDE VDSMLGQRTR VGEHEAMRKI KNEFMSHWDG LMTKPGERIL VLAATNRPFD LDEAIIRRFE RRIMVGLPAV ENREKILRTL
701: LAKEKVDENL DYKELAMMTE GYTGSDLKNL CTTAAYRPVR ELIQQERIKD TEKKKQREPT KAGEEDEGKE ERVITLRPLN RQDFKEAKNQ VAASFAAEGA
801: GMGELKQWNE LYGEGGSRKK EQLTYFL

Arabidopsis Description

p-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I5A3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.