Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56163 | Canola | extracellular, vacuole | 90.83 | 93.54 |
| CDY51824 | Canola | extracellular, plasma membrane | 90.83 | 93.42 |
| Bra029104.1-P | Field mustard | extracellular, plasma membrane | 92.52 | 93.2 |
| CDY19639 | Canola | extracellular, vacuole | 89.02 | 91.91 |
| Bra003102.1-P | Field mustard | extracellular, plasma membrane | 90.35 | 91.12 |
| CDY49165 | Canola | extracellular, plasma membrane | 85.16 | 90.4 |
| KRH08796 | Soybean | cytosol | 17.73 | 84.48 |
| AT4G28000.2 | Thale cress | extracellular | 84.32 | 84.01 |
| KRH38312 | Soybean | endoplasmic reticulum | 71.77 | 72.83 |
| CDX96166 | Canola | cytosol | 59.59 | 72.75 |
| KRH08780 | Soybean | extracellular, plasma membrane | 71.29 | 72.34 |
| PGSC0003DMT400051401 | Potato | endoplasmic reticulum | 72.14 | 72.05 |
| Solyc03g007760.2.1 | Tomato | endoplasmic reticulum | 71.77 | 72.03 |
| VIT_16s0050g01850.t01 | Wine grape | endoplasmic reticulum, vacuole | 72.01 | 71.33 |
| KRH08789 | Soybean | cytosol | 28.47 | 70.45 |
| AT1G64110.2 | Thale cress | cytosol | 69.6 | 69.6 |
| GSMUA_Achr9P05420_001 | Banana | cytosol, mitochondrion | 51.75 | 65.8 |
| Os01t0226400-01 | Rice | plasma membrane | 66.59 | 65.71 |
| Zm00001d008983_P001 | Maize | vacuole | 66.95 | 65.6 |
| EES00021 | Sorghum | endoplasmic reticulum | 66.71 | 65.29 |
| TraesCS3D01G159200.1 | Wheat | cytosol, vacuole | 65.62 | 65.07 |
| HORVU3Hr1G030770.20 | Barley | cytosol, vacuole | 65.98 | 65.04 |
| Zm00001d039315_P003 | Maize | vacuole | 65.98 | 65.04 |
| TraesCS3A01G151300.2 | Wheat | cytosol, vacuole | 65.14 | 64.29 |
| TraesCS3B01G178200.1 | Wheat | cytosol, vacuole | 65.14 | 64.29 |
| AT4G27680.1 | Thale cress | endoplasmic reticulum, plasma membrane | 19.42 | 40.45 |
| AT5G53540.1 | Thale cress | endoplasmic reticulum | 18.58 | 38.21 |
| AT2G34560.2 | Thale cress | cytosol | 15.08 | 31.81 |
| AT2G27600.1 | Thale cress | cytosol | 15.2 | 28.97 |
| AT2G45500.5 | Thale cress | cytosol | 17.01 | 28.37 |
| AT4G24860.1 | Thale cress | cytosol, plastid | 36.79 | 27.18 |
| AT1G62130.1 | Thale cress | cytosol, plastid | 34.02 | 27.04 |
| AT1G80350.1 | Thale cress | cytosol | 17.01 | 26.96 |
| AT1G02890.1 | Thale cress | plastid | 39.93 | 26.57 |
| AT1G50140.1 | Thale cress | mitochondrion | 31.73 | 26.22 |
| AT3G19740.1 | Thale cress | cytosol, mitochondrion, plastid | 31.36 | 26.18 |
| AT4G02480.1 | Thale cress | plastid | 39.08 | 25.61 |
| AT3G27120.1 | Thale cress | nucleus | 18.82 | 22.94 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:5008305 | InterPro:AAA+_ATPase | ProteinID:AED96272.1 |
| ArrayExpress:AT5G52882 | EnsemblPlantsGene:AT5G52882 | RefSeq:AT5G52882 | TAIR:AT5G52882 | RefSeq:AT5G52882-TAIR-G | EnsemblPlants:AT5G52882.1 |
| TAIR:AT5G52882.1 | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | UniProt:F4KHN5 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0016787 | GO:GO:0016887 | RefSeq:NP_001078747.1 | InterPro:P-loop_NTPase | PFAM:PF00004 |
| PO:PO:0000005 | PO:PO:0000293 | ScanProsite:PS00674 | PANTHER:PTHR23074 | PANTHER:PTHR23074:SF98 | SMART:SM00382 |
| SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI0001505657 | SEG:seg | : | : |
Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KHN5]
Coordinates
chr5:-:21433859..21439133
Molecular Weight (calculated)
93012.9 Da
IEP (calculated)
6.180
GRAVY (calculated)
-0.482
Length
829 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQKSVLLSA LGVGVGLGIG LASGQSLGRW ANGSGSVEDG LTGEQIEQEL IRQIVDGRES TVTFEEFPYF LSKRTRELLT SVAYVHLKEY DISKHTRNLA
101: PASKAILLSG PAEFYQQMLA KALSHYFESK LLLLDITDFS IKIQSKYGCT KREPFHKRSI SELTLDKVSS LMGSFSMLSQ REVEPRGTLR RHTSGNDLKS
201: RSTESSNRLP RHKRNASAAS DISSISSRSS SSVSASRKRT TNLCFDEKLF LQSLYKVLSS VSETTPLIIY LRDVEKLLES ERFYKLFQRL LNKLSGPVLI
301: LGSRVLEPED DCQEVDESIS ALFPYNIEIR PPEDESQLVS WKSRLEDDMK MIQFQDNKNH IAEVLAANDI QCDDLSSICH ADTMCLSNHI EEIVVSAITY
401: HLIHTKEPEY RNGKLVISSK SLSHGLSIFQ EGGNRSFEDS LKLDTNTDSK RKGGEVCSKS ESKSGPENKN ESEISLPSNK NDNPLPPKAP EVVPDNEFEK
501: RIRPEVIPAN EIGVTFADIG SLDETKDSLQ ELVMLPLRRP DLFQGGLLKP CRGILLFGPP GTGKTMLAKA IANEAGASFI NVSMSTITSK WFGEDEKNVR
601: ALFTLAAKVS PTIIFVDEVD SMLGQRTRVG EHEAMRKIKN EFMTHWDGLM TKPGERILVL AATNRPFDLD EAIIRRFERR IMVGLPSIES REKILRTLLS
701: KEKTENLDFH ELGQITEGYS GSDLKNLCIT AAYRPVRELI QQERLKDQER KKREEAGKGT EESKEEEAEA SEERVITLRP LNMEDMRKAK TQVAASFASE
801: GAGMNELKQW NDLYGEGGSR KKEQLTYFL
101: PASKAILLSG PAEFYQQMLA KALSHYFESK LLLLDITDFS IKIQSKYGCT KREPFHKRSI SELTLDKVSS LMGSFSMLSQ REVEPRGTLR RHTSGNDLKS
201: RSTESSNRLP RHKRNASAAS DISSISSRSS SSVSASRKRT TNLCFDEKLF LQSLYKVLSS VSETTPLIIY LRDVEKLLES ERFYKLFQRL LNKLSGPVLI
301: LGSRVLEPED DCQEVDESIS ALFPYNIEIR PPEDESQLVS WKSRLEDDMK MIQFQDNKNH IAEVLAANDI QCDDLSSICH ADTMCLSNHI EEIVVSAITY
401: HLIHTKEPEY RNGKLVISSK SLSHGLSIFQ EGGNRSFEDS LKLDTNTDSK RKGGEVCSKS ESKSGPENKN ESEISLPSNK NDNPLPPKAP EVVPDNEFEK
501: RIRPEVIPAN EIGVTFADIG SLDETKDSLQ ELVMLPLRRP DLFQGGLLKP CRGILLFGPP GTGKTMLAKA IANEAGASFI NVSMSTITSK WFGEDEKNVR
601: ALFTLAAKVS PTIIFVDEVD SMLGQRTRVG EHEAMRKIKN EFMTHWDGLM TKPGERILVL AATNRPFDLD EAIIRRFERR IMVGLPSIES REKILRTLLS
701: KEKTENLDFH ELGQITEGYS GSDLKNLCIT AAYRPVRELI QQERLKDQER KKREEAGKGT EESKEEEAEA SEERVITLRP LNMEDMRKAK TQVAASFASE
801: GAGMNELKQW NDLYGEGGSR KKEQLTYFL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.