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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os11t0661400-01 Rice cytosol 16.21 83.82
CDY18129 Canola cytosol, plastid 80.42 82.54
CDY32485 Canola plastid 72.31 81.76
CDX89933 Canola plastid 75.68 81.57
Zm00001d029385_P001 Maize cytosol 12.2 79.58
Bra032579.1-P Field mustard plastid 72.63 78.9
AT4G02480.1 Thale cress plastid 79.13 77.94
Zm00001d049686_P001 Maize plastid 13.8 71.97
Bra033356.1-P Field mustard cytosol, plastid 81.54 68.14
GSMUA_Achr11P... Banana cytosol 36.76 64.96
TraesCS1B01G120800.1 Wheat cytosol 13.08 64.43
KRH71559 Soybean cytosol 56.82 64.01
VIT_07s0005g00200.t01 Wine grape plastid 65.01 62.94
Solyc09g074950.2.1 Tomato plastid 62.36 62.81
KRH71560 Soybean nucleus 61.88 62.03
Solyc06g084530.2.1 Tomato extracellular, nucleus 61.88 61.63
KRH31895 Soybean nucleus 61.24 61.19
KRH31896 Soybean nucleus 60.19 61.17
GSMUA_Achr8P33760_001 Banana cytosol 53.61 60.51
Os03t0344700-01 Rice cytosol 37.24 59.87
HORVU7Hr1G026880.14 Barley cytosol 22.23 59.57
GSMUA_Achr11P... Banana cytosol 41.89 58.06
GSMUA_Achr3P00740_001 Banana mitochondrion 53.37 57.98
GSMUA_Achr8P10090_001 Banana cytosol 49.36 56.58
KXG29076 Sorghum plastid 53.77 54.25
TraesCS4A01G169300.15 Wheat plastid 53.13 53.69
HORVU2Hr1G019730.5 Barley cytosol, plastid 45.02 53.43
TraesCS4D01G145100.12 Wheat plastid 52.57 53.34
Zm00001d007698_P002 Maize plastid 54.01 53.16
TraesCS7B01G028300.1 Wheat cytosol 33.55 52.98
Zm00001d007139_P007 Maize cytosol, plastid 44.86 52.89
TraesCS4B01G126300.7 Wheat nucleus 53.37 52.86
Zm00001d048689_P004 Maize plastid 52.97 52.63
TraesCS2A01G113900.1 Wheat cytosol 46.39 52.5
EES16128 Sorghum cytosol, plastid 39.25 52.47
TraesCS2B01G132900.3 Wheat cytosol, plastid 46.23 52.36
Os07t0672500-02 Rice cytosol, plastid 45.35 52.27
HORVU4Hr1G033300.1 Barley cytosol 53.61 51.58
OQU90457 Sorghum cytosol, plastid 45.1 51.37
TraesCS2D01G114500.1 Wheat cytosol, plastid 46.39 50.97
EER92288 Sorghum cytosol 43.9 49.28
TraesCS4B01G155600.1 Wheat cytosol 43.34 49.09
TraesCS4D01G168600.1 Wheat cytosol 43.58 49.05
TraesCS4A01G142800.3 Wheat cytosol 43.18 48.95
Zm00001d029120_P004 Maize cytosol 43.42 48.05
Zm00001d047494_P007 Maize cytosol 42.46 47.83
TraesCS7D01G127200.1 Wheat cytosol 37.8 47.67
TraesCS7A01G128400.2 Wheat cytosol, plastid 38.44 47.24
HORVU4Hr1G046420.6 Barley cytosol, plastid 43.5 46.93
AT1G62130.1 Thale cress cytosol, plastid 39.09 46.69
AT4G24860.1 Thale cress cytosol, plastid 40.77 45.28
OQU79278 Sorghum cytosol, plastid 33.31 45.01
AT4G27680.1 Thale cress endoplasmic reticulum, plasma membrane 13.48 42.21
AT5G53540.1 Thale cress endoplasmic reticulum 13.08 40.45
AT5G52882.1 Thale cress extracellular, vacuole 26.57 39.93
AT1G64110.2 Thale cress cytosol 26.48 39.81
AT4G28000.2 Thale cress extracellular 26.16 39.18
AT2G34560.2 Thale cress cytosol 10.83 34.35
AT3G19740.1 Thale cress cytosol, mitochondrion, plastid 25.76 32.33
AT1G50140.1 Thale cress mitochondrion 25.28 31.41
AT2G45500.5 Thale cress cytosol 12.04 30.18
AT1G80350.1 Thale cress cytosol 12.44 29.64
AT2G27600.1 Thale cress cytosol 9.87 28.28
AT3G27120.1 Thale cress nucleus 13.8 25.29
CDX89934 Canola cytosol 0.32 1.53
Protein Annotations
Gene3D:1.10.8.60Gene3D:2.60.200.20Gene3D:3.40.50.300MapMan:35.1EntrezGene:839507InterPro:AAA+_ATPase
ProteinID:AEE27492.1ArrayExpress:AT1G02890EnsemblPlantsGene:AT1G02890RefSeq:AT1G02890TAIR:AT1G02890RefSeq:AT1G02890-TAIR-G
EnsemblPlants:AT1G02890.1TAIR:AT1G02890.1InterPro:ATPase_AAA_CSInterPro:ATPase_AAA_coreUnigene:At.23056UniProt:F4HZ82
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0016787GO:GO:0016887
RefSeq:NP_171788.3InterPro:P-loop_NTPasePFAM:PF00004PO:PO:0000013PO:PO:0000037PO:PO:0000084
PO:PO:0000230PO:PO:0000293PO:PO:0001016PO:PO:0001017PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025195
PO:PO:0025281ScanProsite:PS00674PANTHER:PTHR23074PANTHER:PTHR23074:SF70SMART:SM00382InterPro:SMAD_FHA_dom_sf
SUPFAM:SSF49879SUPFAM:SSF52540UniParc:UPI0001E92A6ASEG:seg::
Description
AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:F4HZ82]
Coordinates
chr1:-:645084..652001
Molecular Weight (calculated)
135997.0 Da
IEP (calculated)
5.764
GRAVY (calculated)
-0.381
Length
1246 amino acids
Sequence
(BLAST)
0001: MVDTRRSSSA SKRFCAATSS SSRPTKRSKA AAEPASSSSA SEVPIDNQAP VSDPGSISGD PELRTSDPQS NDAERPVTTT DVPAMETDTN PELEGLVTPT
0101: PAGEVVVEAE KSKSSKKRIA KAPWAKLLSQ FPQNPHLVMR GSVFTVGRRA CDLCIRDHSM PNVLCELRQS EHGGPSVASL EIIGNGVLVQ VNGKIYQRST
0201: CVHLRGGDEI IFTTPGKHAY IFQPLKDENL AAPDRTSSLS LFEAQSAPLK GLHVETRARD SSSVDGTASL LASISKLQNV PFLPPTAKSV KRQQNSEVPV
0301: LPSSCDDFIL DVDLNDADSN NDHAAIASME KTVASTSCAA NDDHDADGNG MDPFQEPEAG NIPDPAYEIR PILSLLGDPS EFDLRGSISK ILVDERREVR
0401: EMPKEYERPS ASVLTRRQAH KDSLRGGILN PQDIEVSFEN FPYFLSGTTK DVLMISTYAH IKYGKEYAEY ASDLPTACPR ILLSGPSGSE IYQEMLAKAL
0501: AKQCGAKLMI VDSLLLPGGS TPKEADTTKE SSRRERLSVL AKRAVQAAQA AVLQHKKPIS SVEAGITGGS TLSSQAVRRQ EVSTATSKSY TFKAGDRVRF
0601: LGPSTSSLAS LRAPPRGPAT GFQGKVLLAF EGNGSSKIGV RFDRSIPDGN DLGGLCEEDH GFFCTASSLR LESSSSDDAD KLAINEIFEV AFNESERGSL
0701: ILFLKDIEKS VSGNTDVYIT LKSKLENLPE NIVVIASQTQ LDNRKEKSHP GGFLFTKFGS NQTALLDLAF PDTFGGRLQD RNTEMPKAVK QITRLFPNKV
0801: TIQLPEDEAS LVDWKDKLER DTEILKAQAN ITSIRAVLSK NQLVCPDIEI LCIKDQTLPS DSVEKVVGFA FNHHLMNCSE PTVKDNKLII SAESITYGLQ
0901: LLHEIQNENK STKKSLKDVV TENEFEKKLL SDVIPPSDIG VSFSDIGALE NVKDTLKELV MLPLQRPELF GKGQLTKPTK GILLFGPPGT GKTMLAKAVA
1001: TEAGANFINI SMSSITSKWF GEGEKYVKAV FSLASKIAPS VIFVDEVDSM LGRRENPGEH EAMRKMKNEF MINWDGLRTK DKERVLVLAA TNRPFDLDEA
1101: VIRRLPRRLM VNLPDSANRS KILSVILAKE EMAEDVDLEA IANMTDGYSG SDLKNLCVTA AHLPIREILE KEKKERSVAQ AENRAMPQLY SSTDVRPLNM
1201: NDFKTAHDQV CASVASDSSN MNELQQWNEL YGEGGSRKKT SLSYFM
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.