Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029120_P004 | Maize | cytosol | 92.97 | 91.65 |
| Zm00001d047494_P007 | Maize | cytosol | 90.63 | 90.96 |
| Os03t0344700-01 | Rice | cytosol | 59.1 | 84.65 |
| TraesCS4A01G142800.3 | Wheat | cytosol | 74.59 | 75.34 |
| TraesCS4D01G168600.1 | Wheat | cytosol | 75.05 | 75.25 |
| TraesCS4B01G155600.1 | Wheat | cytosol | 74.14 | 74.82 |
| HORVU4Hr1G046420.6 | Barley | cytosol, plastid | 74.68 | 71.77 |
| OQU90457 | Sorghum | cytosol, plastid | 64.05 | 64.99 |
| CDX91317 | Canola | plastid | 48.29 | 50.66 |
| CDX90936 | Canola | plastid | 49.73 | 50.46 |
| EES16128 | Sorghum | cytosol, plastid | 40.54 | 48.28 |
| CDY32485 | Canola | plastid | 47.93 | 48.28 |
| KRH71559 | Soybean | cytosol | 47.57 | 47.74 |
| CDX97266 | Canola | plastid | 48.2 | 47.3 |
| CDX89933 | Canola | plastid | 48.38 | 46.45 |
| CDY50381 | Canola | plastid | 50.09 | 46.29 |
| KXG29076 | Sorghum | plastid | 50.72 | 45.59 |
| KRH31896 | Soybean | nucleus | 50.0 | 45.27 |
| CDY18018 | Canola | plastid | 49.46 | 45.0 |
| Bra018548.1-P | Field mustard | plastid | 49.28 | 44.87 |
| Solyc09g074950.2.1 | Tomato | plastid | 50.0 | 44.87 |
| Solyc06g084530.2.1 | Tomato | extracellular, nucleus | 50.54 | 44.84 |
| CDY18129 | Canola | cytosol, plastid | 48.83 | 44.65 |
| CDY22053 | Canola | plastid | 49.37 | 44.59 |
| KRH31895 | Soybean | nucleus | 49.82 | 44.35 |
| Bra000878.1-P | Field mustard | plastid | 49.91 | 44.25 |
| KRH71560 | Soybean | nucleus | 49.46 | 44.17 |
| AT1G02890.1 | Thale cress | plastid | 49.28 | 43.9 |
| Bra032579.1-P | Field mustard | plastid | 45.32 | 43.85 |
| AT4G02480.1 | Thale cress | plastid | 49.91 | 43.79 |
| VIT_07s0005g00200.t01 | Wine grape | plastid | 49.91 | 43.05 |
| Bra036265.1-P | Field mustard | plastid | 49.82 | 42.87 |
| OQU79278 | Sorghum | cytosol, plastid | 35.23 | 42.41 |
| KXG20883 | Sorghum | endoplasmic reticulum | 14.5 | 41.18 |
| EES20020 | Sorghum | endoplasmic reticulum | 28.02 | 36.94 |
| Bra033356.1-P | Field mustard | cytosol, plastid | 48.02 | 35.75 |
| EES01499 | Sorghum | cytosol | 12.07 | 35.17 |
| EES00021 | Sorghum | endoplasmic reticulum | 26.67 | 34.95 |
| KXG32925 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 25.23 | 33.73 |
| KXG32842 | Sorghum | cytosol | 23.51 | 33.68 |
| OQU87315 | Sorghum | cytosol | 11.89 | 32.75 |
| OQU76102 | Sorghum | mitochondrion | 27.3 | 31.3 |
| EES05524 | Sorghum | plastid | 27.03 | 30.4 |
| EER87773 | Sorghum | cytosol | 12.79 | 28.98 |
| EES01274 | Sorghum | cytosol | 12.97 | 27.75 |
| EES00346 | Sorghum | cytosol | 10.63 | 27.06 |
| KXG19781 | Sorghum | cytosol | 12.52 | 26.13 |
| KXG23422 | Sorghum | nucleus | 15.41 | 24.85 |
| CDX89934 | Canola | cytosol | 0.36 | 1.53 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:2.60.200.20 | Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:8082669 | InterPro:AAA+_ATPase |
| InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | UniProt:C5X0M8 | ncoils:Coil | EnsemblPlants:EER92288 | ProteinID:EER92288 |
| ProteinID:EER92288.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0016787 |
| GO:GO:0016887 | InterPro:P-loop_NTPase | PFAM:PF00004 | ScanProsite:PS00674 | PANTHER:PTHR23074 | PANTHER:PTHR23074:SF85 |
| SMART:SM00382 | InterPro:SMAD_FHA_dom_sf | EnsemblPlantsGene:SORBI_3001G375100 | SUPFAM:SSF49879 | SUPFAM:SSF52540 | unigene:Sbi.10042 |
| UniParc:UPI0001A8226B | RefSeq:XP_002465290.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:66360571..66373996
Molecular Weight (calculated)
121537.0 Da
IEP (calculated)
7.854
GRAVY (calculated)
-0.383
Length
1110 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVETRRSAAA KRPAAGEEQE DKGAPASPAP APTEDPAAGP GAADDVASSQ PPKRAKVGCA EADTVKPSVA PAAAGAVVGL PNTAGLQALT GAMDKLEALL
0101: RSKEAQSNQA GHKRGTNNDK DVSAIKRAMD LSEDLSAKIK KTKDKVAGIL NKPQAAGTSK RQEPWCRLIS QYSMHPTLSI YGALFTIGHG AHHDFRLGES
0201: STASPVCRLK QAKRGALLEV FESKVVRVNG KSLDKAAKVT LNGGDEIIFR SPVRHAYIFE QLHQEKSSTP VLSSTCSVQQ GQRSHFKDIQ DLLSSKGRKV
0301: STFYFGRGRS SLLPSGPSAD PLMLNSCKTM EGRCQFSSED NISSGRCQLV KEDLINATVD ASDISESFDS CPYYLSEHTK CALMSSAYVH LHCKNYFKFT
0401: KDISSLSQRV LLSGPTGTDI YQEYLVKALA KYFGARLLTV DSSMLFGGQT SKESESYKKG DRVRYIGSLQ STGIILDGQS PPDFGSQGEI FLPFEENRSS
0501: KVGVRFDKKI LGGNDLGGNC EVDHGLFCPV DSLCPDIPGW EVTSKHPFDV IVEFISEEIR QGPLILFLKD TEKICGNNDS YHGLKSKLKH FPAGAFIIGS
0601: QIQPDNRKEK ANGSSPFLSK FPYSQAILDL ALQDIDGGND NNKETSKAMK HLIKLFPNKV TLEAPQDETE LSRWNQMLNR DIEVLKGNAN ISKLRSFLTR
0701: VGLECTDLEA ILVKDRILTN ECIDKIIGFA LSHQLKNCTN PDPSLSSVQF ALSSESLKHG VDMLESIQSG SKSSTKRKSL KDIVTENEFE KRLLADVIPP
0801: HEIGVTFEDI GALESVKDTL KELVMLPLQR PELFNRGQLM KPCKGILLFG PPGTGKTMLA KAVATEAGAN FINISMSSIS SKWLGEGEKF VKAVFSLASK
0901: IAPSVIFVDE VDGMLGRREN PGEHEAMRKM KNEFMVNWDG LRTKEKERVL VLAATNRPFD LDEAVVRRLP RRLMVNLPDA SNRRKILSVI LAKEDLADDV
1001: DLEAIANLTE GYSGSDLKNL CVTAAHRPIR EILEKEKKER ASAEAENRSL PLSHTSNDVR ALRLGDFIHA HEQVCASVSS DSSNMNELVQ WNDLYGEGGS
1101: RKKTTLSYFM
0101: RSKEAQSNQA GHKRGTNNDK DVSAIKRAMD LSEDLSAKIK KTKDKVAGIL NKPQAAGTSK RQEPWCRLIS QYSMHPTLSI YGALFTIGHG AHHDFRLGES
0201: STASPVCRLK QAKRGALLEV FESKVVRVNG KSLDKAAKVT LNGGDEIIFR SPVRHAYIFE QLHQEKSSTP VLSSTCSVQQ GQRSHFKDIQ DLLSSKGRKV
0301: STFYFGRGRS SLLPSGPSAD PLMLNSCKTM EGRCQFSSED NISSGRCQLV KEDLINATVD ASDISESFDS CPYYLSEHTK CALMSSAYVH LHCKNYFKFT
0401: KDISSLSQRV LLSGPTGTDI YQEYLVKALA KYFGARLLTV DSSMLFGGQT SKESESYKKG DRVRYIGSLQ STGIILDGQS PPDFGSQGEI FLPFEENRSS
0501: KVGVRFDKKI LGGNDLGGNC EVDHGLFCPV DSLCPDIPGW EVTSKHPFDV IVEFISEEIR QGPLILFLKD TEKICGNNDS YHGLKSKLKH FPAGAFIIGS
0601: QIQPDNRKEK ANGSSPFLSK FPYSQAILDL ALQDIDGGND NNKETSKAMK HLIKLFPNKV TLEAPQDETE LSRWNQMLNR DIEVLKGNAN ISKLRSFLTR
0701: VGLECTDLEA ILVKDRILTN ECIDKIIGFA LSHQLKNCTN PDPSLSSVQF ALSSESLKHG VDMLESIQSG SKSSTKRKSL KDIVTENEFE KRLLADVIPP
0801: HEIGVTFEDI GALESVKDTL KELVMLPLQR PELFNRGQLM KPCKGILLFG PPGTGKTMLA KAVATEAGAN FINISMSSIS SKWLGEGEKF VKAVFSLASK
0901: IAPSVIFVDE VDGMLGRREN PGEHEAMRKM KNEFMVNWDG LRTKEKERVL VLAATNRPFD LDEAVVRRLP RRLMVNLPDA SNRRKILSVI LAKEDLADDV
1001: DLEAIANLTE GYSGSDLKNL CVTAAHRPIR EILEKEKKER ASAEAENRSL PLSHTSNDVR ALRLGDFIHA HEQVCASVSS DSSNMNELVQ WNDLYGEGGS
1101: RKKTTLSYFM
0001: MVDTRRSSSA SKRFCAATSS SSRPTKRSKA AAEPASSSSA SEVPIDNQAP VSDPGSISGD PELRTSDPQS NDAERPVTTT DVPAMETDTN PELEGLVTPT
0101: PAGEVVVEAE KSKSSKKRIA KAPWAKLLSQ FPQNPHLVMR GSVFTVGRRA CDLCIRDHSM PNVLCELRQS EHGGPSVASL EIIGNGVLVQ VNGKIYQRST
0201: CVHLRGGDEI IFTTPGKHAY IFQPLKDENL AAPDRTSSLS LFEAQSAPLK GLHVETRARD SSSVDGTASL LASISKLQNV PFLPPTAKSV KRQQNSEVPV
0301: LPSSCDDFIL DVDLNDADSN NDHAAIASME KTVASTSCAA NDDHDADGNG MDPFQEPEAG NIPDPAYEIR PILSLLGDPS EFDLRGSISK ILVDERREVR
0401: EMPKEYERPS ASVLTRRQAH KDSLRGGILN PQDIEVSFEN FPYFLSGTTK DVLMISTYAH IKYGKEYAEY ASDLPTACPR ILLSGPSGSE IYQEMLAKAL
0501: AKQCGAKLMI VDSLLLPGGS TPKEADTTKE SSRRERLSVL AKRAVQAAQA AVLQHKKPIS SVEAGITGGS TLSSQAVRRQ EVSTATSKSY TFKAGDRVRF
0601: LGPSTSSLAS LRAPPRGPAT GFQGKVLLAF EGNGSSKIGV RFDRSIPDGN DLGGLCEEDH GFFCTASSLR LESSSSDDAD KLAINEIFEV AFNESERGSL
0701: ILFLKDIEKS VSGNTDVYIT LKSKLENLPE NIVVIASQTQ LDNRKEKSHP GGFLFTKFGS NQTALLDLAF PDTFGGRLQD RNTEMPKAVK QITRLFPNKV
0801: TIQLPEDEAS LVDWKDKLER DTEILKAQAN ITSIRAVLSK NQLVCPDIEI LCIKDQTLPS DSVEKVVGFA FNHHLMNCSE PTVKDNKLII SAESITYGLQ
0901: LLHEIQNENK STKKSLKDVV TENEFEKKLL SDVIPPSDIG VSFSDIGALE NVKDTLKELV MLPLQRPELF GKGQLTKPTK GILLFGPPGT GKTMLAKAVA
1001: TEAGANFINI SMSSITSKWF GEGEKYVKAV FSLASKIAPS VIFVDEVDSM LGRRENPGEH EAMRKMKNEF MINWDGLRTK DKERVLVLAA TNRPFDLDEA
1101: VIRRLPRRLM VNLPDSANRS KILSVILAKE EMAEDVDLEA IANMTDGYSG SDLKNLCVTA AHLPIREILE KEKKERSVAQ AENRAMPQLY SSTDVRPLNM
1201: NDFKTAHDQV CASVASDSSN MNELQQWNEL YGEGGSRKKT SLSYFM
0101: PAGEVVVEAE KSKSSKKRIA KAPWAKLLSQ FPQNPHLVMR GSVFTVGRRA CDLCIRDHSM PNVLCELRQS EHGGPSVASL EIIGNGVLVQ VNGKIYQRST
0201: CVHLRGGDEI IFTTPGKHAY IFQPLKDENL AAPDRTSSLS LFEAQSAPLK GLHVETRARD SSSVDGTASL LASISKLQNV PFLPPTAKSV KRQQNSEVPV
0301: LPSSCDDFIL DVDLNDADSN NDHAAIASME KTVASTSCAA NDDHDADGNG MDPFQEPEAG NIPDPAYEIR PILSLLGDPS EFDLRGSISK ILVDERREVR
0401: EMPKEYERPS ASVLTRRQAH KDSLRGGILN PQDIEVSFEN FPYFLSGTTK DVLMISTYAH IKYGKEYAEY ASDLPTACPR ILLSGPSGSE IYQEMLAKAL
0501: AKQCGAKLMI VDSLLLPGGS TPKEADTTKE SSRRERLSVL AKRAVQAAQA AVLQHKKPIS SVEAGITGGS TLSSQAVRRQ EVSTATSKSY TFKAGDRVRF
0601: LGPSTSSLAS LRAPPRGPAT GFQGKVLLAF EGNGSSKIGV RFDRSIPDGN DLGGLCEEDH GFFCTASSLR LESSSSDDAD KLAINEIFEV AFNESERGSL
0701: ILFLKDIEKS VSGNTDVYIT LKSKLENLPE NIVVIASQTQ LDNRKEKSHP GGFLFTKFGS NQTALLDLAF PDTFGGRLQD RNTEMPKAVK QITRLFPNKV
0801: TIQLPEDEAS LVDWKDKLER DTEILKAQAN ITSIRAVLSK NQLVCPDIEI LCIKDQTLPS DSVEKVVGFA FNHHLMNCSE PTVKDNKLII SAESITYGLQ
0901: LLHEIQNENK STKKSLKDVV TENEFEKKLL SDVIPPSDIG VSFSDIGALE NVKDTLKELV MLPLQRPELF GKGQLTKPTK GILLFGPPGT GKTMLAKAVA
1001: TEAGANFINI SMSSITSKWF GEGEKYVKAV FSLASKIAPS VIFVDEVDSM LGRRENPGEH EAMRKMKNEF MINWDGLRTK DKERVLVLAA TNRPFDLDEA
1101: VIRRLPRRLM VNLPDSANRS KILSVILAKE EMAEDVDLEA IANMTDGYSG SDLKNLCVTA AHLPIREILE KEKKERSVAQ AENRAMPQLY SSTDVRPLNM
1201: NDFKTAHDQV CASVASDSSN MNELQQWNEL YGEGGSRKKT SLSYFM
Arabidopsis Description
AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:F4HZ82]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.