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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY18018 Canola plastid 98.9 88.69
CDX91317 Canola plastid 84.37 87.24
Bra000878.1-P Field mustard plastid 99.54 86.98
Os11t0661400-01 Rice cytosol 18.74 85.06
CDY50381 Canola plastid 92.96 84.68
CDY22053 Canola plastid 90.13 80.23
CDX97266 Canola plastid 82.82 80.11
Zm00001d029385_P001 Maize cytosol 13.89 79.58
AT4G02480.1 Thale cress plastid 89.12 77.08
CDY32485 Canola plastid 72.49 71.96
CDX89933 Canola plastid 74.86 70.85
Zm00001d049686_P001 Maize plastid 15.45 70.71
CDY18129 Canola cytosol, plastid 76.51 68.95
GSMUA_Achr11P... Banana cytosol 42.32 65.67
TraesCS1B01G120800.1 Wheat cytosol 15.08 65.22
HORVU7Hr1G026880.14 Barley cytosol 25.5 60.0
Os03t0344700-01 Rice cytosol 42.14 59.48
KRH71559 Soybean cytosol 59.14 58.5
GSMUA_Achr8P33760_001 Banana cytosol 58.78 58.24
Solyc09g074950.2.1 Tomato plastid 65.08 57.56
Solyc06g084530.2.1 Tomato extracellular, nucleus 65.08 56.91
VIT_07s0005g00200.t01 Wine grape plastid 66.82 56.8
KRH71560 Soybean nucleus 64.53 56.8
KRH31896 Soybean nucleus 63.53 56.69
KRH31895 Soybean nucleus 64.44 56.54
GSMUA_Achr11P... Banana cytosol 45.16 54.95
GSMUA_Achr8P10090_001 Banana cytosol 53.2 53.54
Zm00001d007139_P007 Maize cytosol, plastid 51.55 53.36
GSMUA_Achr3P00740_001 Banana mitochondrion 55.67 53.09
HORVU2Hr1G019730.5 Barley cytosol, plastid 50.82 52.95
CDX92656 Canola cytosol 20.84 52.9
TraesCS7B01G028300.1 Wheat cytosol 38.12 52.85
EES16128 Sorghum cytosol, plastid 44.97 52.79
Os07t0672500-02 Rice cytosol, plastid 51.83 52.45
OQU90457 Sorghum cytosol, plastid 52.19 52.19
TraesCS2A01G113900.1 Wheat cytosol 52.19 51.86
TraesCS2B01G132900.3 Wheat cytosol, plastid 51.92 51.64
KXG29076 Sorghum plastid 57.59 51.01
TraesCS2D01G114500.1 Wheat cytosol, plastid 52.38 50.53
Zm00001d007698_P002 Maize plastid 58.32 50.39
TraesCS4A01G169300.15 Wheat plastid 56.31 49.96
EER92288 Sorghum cytosol 50.46 49.73
TraesCS4D01G145100.12 Wheat plastid 55.76 49.67
TraesCS4B01G126300.7 Wheat nucleus 56.76 49.36
TraesCS4A01G142800.3 Wheat cytosol 49.27 49.04
TraesCS4B01G155600.1 Wheat cytosol 49.27 49.0
Zm00001d048689_P004 Maize plastid 56.12 48.96
TraesCS4D01G168600.1 Wheat cytosol 49.36 48.78
Zm00001d029120_P004 Maize cytosol 49.91 48.49
TraesCS7D01G127200.1 Wheat cytosol 43.78 48.48
Zm00001d047494_P007 Maize cytosol 48.81 48.28
HORVU4Hr1G033300.1 Barley cytosol 56.49 47.72
TraesCS7A01G128400.2 Wheat cytosol, plastid 43.6 47.04
HORVU4Hr1G046420.6 Barley cytosol, plastid 49.63 47.01
CDY24618 Canola endoplasmic reticulum 11.79 45.91
OQU79278 Sorghum cytosol, plastid 37.39 44.36
CDY71574 Canola endoplasmic reticulum, plasma membrane 15.27 42.6
CDX92836 Canola endoplasmic reticulum, plasma membrane 15.17 42.46
CDY29857 Canola endoplasmic reticulum, plasma membrane 15.17 42.46
CDY19035 Canola endoplasmic reticulum 15.08 42.09
CDY30236 Canola endoplasmic reticulum 15.08 42.09
CDY55344 Canola endoplasmic reticulum 15.08 42.09
CDY14372 Canola endoplasmic reticulum 14.99 41.31
CDY38752 Canola endoplasmic reticulum 14.53 41.19
CDY20251 Canola endoplasmic reticulum 14.9 40.55
CDY56163 Canola extracellular, vacuole 29.52 40.12
CDY51824 Canola extracellular, plasma membrane 29.43 39.95
CDY49165 Canola extracellular, plasma membrane 28.34 39.69
CDY47077 Canola endoplasmic reticulum, plasma membrane 14.08 39.59
CDY19639 Canola extracellular, vacuole 28.88 39.35
CDY08360 Canola endoplasmic reticulum 29.43 38.75
CDY38192 Canola plasma membrane 29.43 38.75
CDX96166 Canola cytosol 23.77 38.29
CDX89214 Canola extracellular, plasma membrane 24.77 35.75
CDX84641 Canola cytosol 12.16 35.47
CDX79566 Canola cytosol 12.07 35.11
CDY17260 Canola cytosol 12.16 34.73
CDY18925 Canola plastid 11.43 34.53
CDX92857 Canola endoplasmic reticulum, extracellular, plasma membrane 22.21 34.52
CDX84306 Canola cytosol 12.16 34.46
CDY29873 Canola endoplasmic reticulum, extracellular, plasma membrane 22.03 34.38
CDY19014 Canola endoplasmic reticulum, extracellular 22.3 33.98
CDY45052 Canola mitochondrion 28.7 31.43
CDY33415 Canola cytosol, mitochondrion 29.07 31.3
CDY03591 Canola cytosol, mitochondrion, plastid 28.43 31.13
CDY42204 Canola cytosol, mitochondrion, plastid 29.16 30.64
CDX74745 Canola cytosol 12.8 29.47
CDY37590 Canola cytosol 13.53 28.96
CDY38662 Canola cytosol 13.62 28.88
CDX95077 Canola cytosol 11.33 28.77
CDX79393 Canola cytosol 13.89 28.73
CDX93578 Canola cytosol 11.24 28.6
CDY57698 Canola cytosol 13.8 28.44
CDY31186 Canola cytosol 11.15 28.11
CDX71438 Canola cytosol 10.97 27.97
CDY04504 Canola cytosol 10.97 27.78
CDX83275 Canola cytosol 10.97 27.71
CDY37046 Canola cytosol 12.71 27.2
CDY28494 Canola plastid 15.45 26.08
CDY34176 Canola plastid 15.27 25.77
CDY27380 Canola nucleus 12.98 19.14
CDX89934 Canola cytosol 0.37 1.53
Protein Annotations
Gene3D:1.10.8.60Gene3D:2.60.200.20Gene3D:3.40.50.300MapMan:35.1GO:A0A078DNV8InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CSInterPro:ATPase_AAA_coreEnsemblPlants:CDX90936ProteinID:CDX90936ProteinID:CDX90936.1GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005524EnsemblPlantsGene:GSBRNA2T00151676001InterPro:P-loop_NTPase
PFAM:PF00004ScanProsite:PS00674PANTHER:PTHR23074PANTHER:PTHR23074:SF138SMART:SM00382InterPro:SMAD_FHA_dom_sf
SUPFAM:SSF49879SUPFAM:SSF52540UniParc:UPI0004EE39F9SEG:seg::
Description
BnaA03g26160D
Coordinates
chrLK031864:+:1432329..1439392
Molecular Weight (calculated)
118714.0 Da
IEP (calculated)
5.153
GRAVY (calculated)
-0.358
Length
1094 amino acids
Sequence
(BLAST)
0001: MVETRRSSSA SKRFCSSSSS PEPSSSSPRP TKRSKVKIDA AIESAAAAEP AGSSSASEVP VENQGPVSDP GSESGEPELG SSDPQGVDAE KPVLTDVPVM
0101: EISPEADANP EADVLATPAV AGEVVADGEK SKAGKKRAKA PWAKLLSQYS QNPHRIMRGP VFTVGRRGCD LSIKDQSMPS TLCELKQSDH GGPSVATLEI
0201: TGNGVVVQVN GKCYQKSTCV HLRGGDEVIF TNFGRHAYIF QPLKDENLAA APDRASSNLN ADGSGLDPFQ EAADGNAPGS GYEIRPILRL LGEPSSVDIR
0301: GISKLLDERR EVRELLKEYD LSSTISTRRQ AFKDSLREGV LNGQDIDVSL EDFPYFLSAT TKDVLIASMY VHMEGGSKFA KYASDLSTTC PRILLSGPAG
0401: SEIYQEMLAK ALAKRFGAKL MIVDSLLLPG GSPAKEAESS KDGDRVKYVG PSSSAISSLQ GPPLRGPSIG FQGKVLLAFE DNCSSKVGIR FDRPVPDGND
0501: LGGLCEEDHG FFCAATSLRL DGSSSDDADK LAVNEVFEVA LSESEGGSLI LFLKDIEKSL VGNSDVYATL KSKFENLPEN IVVMASQTQL DSRKEKSHPG
0601: GFLFTKFGGN QTALLDLAFP DNFSKLHDRS KETPKSMKQI TRLFPNKVAI QLPQDEALLS DWKEKLDRDT ELLKVQANIT GILSVLTKNR LDCPDLGTLS
0701: IKDQTLPSES VEKVVGWALS HHLMNCAEPT VKDNKLVISA ESITYGLQML HGVQDENKSL KKSLKDVVTE NEFEKKLLSD VIPPSDIGVS FDDIGALENV
0801: KDTLKELVML PLQRPELFDK GQLTKPTKGI LLFGPPGTGK TMLAKAVATE AGANFINISM SSITSKWFGE GEKYVKAVFS LASKIAPSVI FVDEVDSMLG
0901: RRENPGEHEA MRKMKNEFMV NWDGLRTKDR ERVLVLAATN RPFDLDEAVI RRLPRRLMVN LPDATNRSKI LSVILSKEEI APDVDLEAIA NMTDGYSGSD
1001: LKNLCVTAAH LPIREILEKE KKEKTAAEAE NRPTPPLYSC TDIRSLTMAD FKAAHEQVCA SVSTDSSNMN ELQQWNELYG EGGSRKKTSL SYFM
Best Arabidopsis Sequence Match ( AT1G62130.2 )
(BLAST)
0001: MVSPGRSESI SGENNTTLPD GSSGKRIPPS SPSGDKSPSS KRSKLGDGSG ASTDSSEAPT SEDAKIAEGL TPTLPDSSFS GWTYRHCTFK TPWCKLLSQS
0101: AKQQNLCLYE SSCTFGSCLT SDFTLHDRNL GAFLCKITRI QRNGNVVAVL DITGTGGPLR INKAFVIKNV SHELHSGDEL VFGLNRSYAF IYQQMSKVTV
0201: ISGGEQVPAG KFLQLEREAR DPSRVSMLAS LEISRENPAT SGVQEGVEGY FPVNNQSNKA ADSGVVISHN QDSKMEILDE ENEVTRNRRA QQAAKFREYI
0301: RAGIVDGKRL EFSFENFPYY LSEHTKYVLL AVSDMHLNKM NIGYAPYASD LTILNPRILL SGPAGSEIYQ EILAKALANS FNAKLLIFDS NPILGVMTAK
0401: EFESLMNGPA LIDRGKSLDL SSGQGDSSIP SPATSPRSFG TPVNHNLKKG DRVRFFGDEL CPGLPTSRGP PYGFIGKVLL VFDENPSAKV GVRFENPVPD
0501: GVDLGQLCEM GHGFFCSATD LQFESSASDD LNELLVTKLF EVAHDQSRTC PVIIFLKDAE KYFVGNSHFC SAFKSKLEVI SDNLIVICSQ THSDNPKEKG
0601: IGRLTDLFVN KVTIYMPQGE ELLKSWKYHL DRDAETLKMK ANYNHLRMVL GRCGIECEGI ETLCMKDLTL RRDSAEKIIG WALSHHIKSN PGADPDVRVI
0701: LSLESLKCGI ELLEIESKKS LKDIVTENTF EISDIIPPSE IGVTFDDIGA LENVKDTLKE LVMLPFQWPE LFCKGQLTKP CNGILLFGPS GTGKTMLAKA
0801: VATEAGANLI NMSMSRWFSE GEKYVKAVFS LASKISPSII FLDEVESMLH RYRLKTKNEF IINWDGLRTN EKERVLVLAA TNRPFDLDEA VIRRLPHRLM
0901: VGLPDARSRS KILKVILSKE DLSPDFDIDE VASMTNGYSG NDLKNLCVTA ARRRIIEIVE KEKSERDAAV AEGRVPPAGS GGSDLRVLKM EDFRNALELV
1001: SMSISSKSVN MTALRQWNED YGEGGSRRNE SFSQYV
Arabidopsis Description
AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:F4HX45]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.