Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018640.1-P | Field mustard | cytosol | 99.77 | 99.77 |
| CDX95077 | Canola | cytosol | 99.53 | 99.3 |
| CDY04504 | Canola | cytosol | 93.95 | 93.52 |
| CDX83275 | Canola | cytosol | 93.95 | 93.3 |
| CDX71438 | Canola | cytosol | 93.02 | 93.24 |
| CDY31186 | Canola | cytosol | 93.72 | 92.86 |
| Os01t0141100-02 | Rice | cytosol, plasma membrane | 64.88 | 92.08 |
| KRH30451 | Soybean | cytosol | 90.7 | 89.86 |
| KRH25197 | Soybean | cytosol | 90.7 | 89.86 |
| GSMUA_Achr4P24320_001 | Banana | cytosol | 84.88 | 89.46 |
| VIT_06s0080g00160.t01 | Wine grape | extracellular | 90.0 | 89.38 |
| KRH22691 | Soybean | cytosol | 84.88 | 89.24 |
| KRH26619 | Soybean | nucleus | 90.47 | 89.22 |
| EES00346 | Sorghum | cytosol | 90.23 | 88.99 |
| GSMUA_Achr2P22550_001 | Banana | cytosol | 85.12 | 88.83 |
| Zm00001d039904_P006 | Maize | cytosol | 89.77 | 88.74 |
| GSMUA_Achr3P01430_001 | Banana | cytosol | 83.72 | 87.59 |
| TraesCS3A01G054100.1 | Wheat | cytosol | 88.84 | 87.21 |
| TraesCS3B01G065200.1 | Wheat | cytosol | 88.6 | 86.99 |
| TraesCS3D01G053600.1 | Wheat | cytosol | 88.37 | 86.76 |
| PGSC0003DMT400050194 | Potato | cytosol | 86.51 | 85.52 |
| Solyc11g007170.1.1 | Tomato | cytosol | 80.23 | 85.4 |
| Zm00001d008596_P005 | Maize | cytosol | 90.0 | 85.05 |
| TraesCS6A01G133300.1 | Wheat | cytosol | 74.88 | 73.52 |
| TraesCS6B01G161700.1 | Wheat | cytosol | 74.65 | 73.46 |
| TraesCS6D01G122900.1 | Wheat | cytosol | 74.65 | 73.46 |
| Os02t0159900-01 | Rice | plasma membrane | 73.49 | 72.98 |
| Os01t0141300-00 | Rice | cytosol | 73.49 | 66.11 |
| HORVU3Hr1G010300.1 | Barley | cytosol, plastid | 75.12 | 61.64 |
| CDY18925 | Canola | plastid | 33.26 | 39.5 |
| CDX84641 | Canola | cytosol | 32.79 | 37.6 |
| CDX79566 | Canola | cytosol | 32.79 | 37.5 |
| CDY17260 | Canola | cytosol | 33.26 | 37.34 |
| CDX84306 | Canola | cytosol | 33.02 | 36.79 |
| CDX74745 | Canola | cytosol | 36.28 | 32.84 |
| CDY37590 | Canola | cytosol | 36.98 | 31.12 |
| CDY38662 | Canola | cytosol | 36.74 | 30.62 |
| CDX79393 | Canola | cytosol | 37.44 | 30.43 |
| CDY57698 | Canola | cytosol | 37.44 | 30.32 |
| CDY37046 | Canola | cytosol | 35.58 | 29.94 |
| CDY38752 | Canola | endoplasmic reticulum | 26.28 | 29.27 |
| CDY19035 | Canola | endoplasmic reticulum | 26.05 | 28.57 |
| CDY71574 | Canola | endoplasmic reticulum, plasma membrane | 25.81 | 28.32 |
| CDY47077 | Canola | endoplasmic reticulum, plasma membrane | 25.58 | 28.28 |
| CDY29857 | Canola | endoplasmic reticulum, plasma membrane | 25.58 | 28.13 |
| CDX92836 | Canola | endoplasmic reticulum, plasma membrane | 25.58 | 28.13 |
| CDY30236 | Canola | endoplasmic reticulum | 25.58 | 28.06 |
| CDY55344 | Canola | endoplasmic reticulum | 25.58 | 28.06 |
| CDY14372 | Canola | endoplasmic reticulum | 25.81 | 27.96 |
| CDY20251 | Canola | endoplasmic reticulum | 25.81 | 27.61 |
| CDY24618 | Canola | endoplasmic reticulum | 17.44 | 26.69 |
| CDY34176 | Canola | plastid | 32.56 | 21.6 |
| CDY28494 | Canola | plastid | 32.56 | 21.6 |
| CDX92656 | Canola | cytosol | 21.63 | 21.58 |
| CDY27380 | Canola | nucleus | 35.81 | 20.75 |
| CDX96166 | Canola | cytosol | 26.51 | 16.79 |
| CDY08360 | Canola | endoplasmic reticulum | 30.23 | 15.64 |
| CDY19639 | Canola | extracellular, vacuole | 29.07 | 15.57 |
| CDY38192 | Canola | plasma membrane | 30.0 | 15.52 |
| CDY49165 | Canola | extracellular, plasma membrane | 28.14 | 15.49 |
| CDY56163 | Canola | extracellular, vacuole | 28.6 | 15.28 |
| CDY51824 | Canola | extracellular, plasma membrane | 28.6 | 15.26 |
| CDY03591 | Canola | cytosol, mitochondrion, plastid | 30.93 | 13.31 |
| CDY45052 | Canola | mitochondrion | 30.7 | 13.21 |
| CDY33415 | Canola | cytosol, mitochondrion | 31.16 | 13.19 |
| CDY42204 | Canola | cytosol, mitochondrion, plastid | 31.16 | 12.87 |
| CDX91317 | Canola | plastid | 28.84 | 11.72 |
| CDX89214 | Canola | extracellular, plasma membrane | 20.47 | 11.61 |
| CDY32485 | Canola | plastid | 29.3 | 11.43 |
| CDX90936 | Canola | plastid | 28.6 | 11.24 |
| CDX97266 | Canola | plastid | 28.6 | 10.88 |
| CDX89933 | Canola | plastid | 29.07 | 10.81 |
| CDY18129 | Canola | cytosol, plastid | 29.53 | 10.46 |
| CDY18018 | Canola | plastid | 29.3 | 10.33 |
| CDY19014 | Canola | endoplasmic reticulum, extracellular | 17.21 | 10.31 |
| CDY50381 | Canola | plastid | 28.37 | 10.16 |
| CDY29873 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 16.28 | 9.99 |
| CDX92857 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 16.28 | 9.94 |
| CDY22053 | Canola | plastid | 28.37 | 9.93 |
| CDX89934 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:1.20.58.280 | MapMan:22.5.4.4.1 | Gene3D:3.40.50.300 | GO:A0A078E241 | InterPro:AAA+_ATPase |
| InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | EnsemblPlants:CDX93578 | ProteinID:CDX93578 | ProteinID:CDX93578.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00156258001 | InterPro:MIT | InterPro:MIT_dom_sf |
| InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF04212 | PFAM:PF09336 | ScanProsite:PS00674 | PANTHER:PTHR23074 |
| PANTHER:PTHR23074:SF137 | SMART:SM00382 | SMART:SM00745 | SUPFAM:SSF116846 | SUPFAM:SSF52540 | UniParc:UPI0004EDD6B8 |
| InterPro:Vps4_C | SEG:seg | : | : | : | : |
Description
BnaA06g04700D
Coordinates
chrLK031876:+:789389..791782
Molecular Weight (calculated)
48105.1 Da
IEP (calculated)
7.135
GRAVY (calculated)
-0.545
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSNFKEQAI EYVKQAVQED NAGNYNKAFP LYMNALEYFK THLKYEKNPK IREAITQKFT EYLRRAEEIR AVLDEGGSGP GSNGDAAVAT KAKSKGKDGD
101: GEDKEQSKLR AGLDSAIVRE KPNVKWSDVA GLESAKQALQ EAVILPVKFP QFFTGKRRPW RAFLLYGPPG TGKSYLAKAV ATEADSTFFS VSSSDLVSKW
201: MGESEKLVSN LFEMARESAP SIIFVDEIDS LCGQRGEGNE SEASRRIKTE LLVQMQGVGH NDEKVLVLAA TNTPYALDQA IRRRFDKRIY IPLPDVKARQ
301: HMFKVHLGDT PHNLNESDFE YLARKTEGFS GSDVAVCVKD VLFEPVRKTQ DAMFFFKSAD GTWMPCGPKQ SGAIQITMQD LAEKGLAEKI IPPPISRTDF
401: EKVLARQRPT VSKSDLEVHE RFTKEFGEEG
101: GEDKEQSKLR AGLDSAIVRE KPNVKWSDVA GLESAKQALQ EAVILPVKFP QFFTGKRRPW RAFLLYGPPG TGKSYLAKAV ATEADSTFFS VSSSDLVSKW
201: MGESEKLVSN LFEMARESAP SIIFVDEIDS LCGQRGEGNE SEASRRIKTE LLVQMQGVGH NDEKVLVLAA TNTPYALDQA IRRRFDKRIY IPLPDVKARQ
301: HMFKVHLGDT PHNLNESDFE YLARKTEGFS GSDVAVCVKD VLFEPVRKTQ DAMFFFKSAD GTWMPCGPKQ SGAIQITMQD LAEKGLAEKI IPPPISRTDF
401: EKVLARQRPT VSKSDLEVHE RFTKEFGEEG
001: MYSNFKEQAI EYVKQAVHED NAGNYNKAFP LYMNALEYFK THLKYEKNPK IREAITQKFT EYLRRAEEIR AVLDEGGSGP GSNGDAAVAT RPKTKPKDGE
101: GGGKDGEDPE QSKLRAGLNS AIVREKPNIK WSDVAGLESA KQALQEAVIL PVKFPQFFTG KRRPWRAFLL YGPPGTGKSY LAKAVATEAD STFFSVSSSD
201: LVSKWMGESE KLVSNLFEMA RESAPSIIFV DEIDSLCGTR GEGNESEASR RIKTELLVQM QGVGHNDEKV LVLAATNTPY ALDQAIRRRF DKRIYIPLPE
301: AKARQHMFKV HLGDTPHNLT EPDFEYLGQK TEGFSGSDVS VCVKDVLFEP VRKTQDAMFF FKSPDGTWMP CGPRHPGAIQ TTMQDLATKG LAEKIIPPPI
401: TRTDFEKVLA RQRPTVSKSD LDVHERFTQE FGEEG
101: GGGKDGEDPE QSKLRAGLNS AIVREKPNIK WSDVAGLESA KQALQEAVIL PVKFPQFFTG KRRPWRAFLL YGPPGTGKSY LAKAVATEAD STFFSVSSSD
201: LVSKWMGESE KLVSNLFEMA RESAPSIIFV DEIDSLCGTR GEGNESEASR RIKTELLVQM QGVGHNDEKV LVLAATNTPY ALDQAIRRRF DKRIYIPLPE
301: AKARQHMFKV HLGDTPHNLT EPDFEYLGQK TEGFSGSDVS VCVKDVLFEP VRKTQDAMFF FKSPDGTWMP CGPRHPGAIQ TTMQDLATKG LAEKIIPPPI
401: TRTDFEKVLA RQRPTVSKSD LDVHERFTQE FGEEG
Arabidopsis Description
SKD1Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.