CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97266	Canola	plastid	93.01	87.0
Os11t0661400-01	Rice	cytosol	19.38	85.06
CDX90936	Canola	plastid	87.24	84.37
Bra018548.1-P	Field mustard	plastid	95.84	83.18
Zm00001d029385_P001	Maize	cytosol	14.37	79.58
CDY50381	Canola	plastid	88.37	77.85
CDY22053	Canola	plastid	87.9	75.67
CDY18018	Canola	plastid	87.05	75.49
CDY32485	Canola	plastid	74.86	71.87
AT4G02480.1	Thale cress	plastid	85.63	71.62
CDX89933	Canola	plastid	75.99	69.55
Zm00001d049686_P001	Maize	plastid	15.69	69.46
CDY18129	Canola	cytosol, plastid	76.47	66.64
TraesCS1B01G120800.1	Wheat	cytosol	15.6	65.22
GSMUA_Achr11P...	Banana	cytosol	43.01	64.54
HORVU7Hr1G026880.14	Barley	cytosol	26.65	60.65
KRH71559	Soybean	cytosol	60.87	58.23
Os03t0344700-01	Rice	cytosol	42.63	58.19
GSMUA_Achr8P33760_001	Banana	cytosol	58.88	56.43
KRH71560	Soybean	nucleus	65.41	55.67
KRH31896	Soybean	nucleus	64.46	55.63
Solyc09g074950.2.1	Tomato	plastid	65.03	55.62
KRH31895	Soybean	nucleus	64.93	55.09
Solyc06g084530.2.1	Tomato	extracellular, nucleus	64.93	54.92
VIT_07s0005g00200.t01	Wine grape	plastid	66.45	54.62
GSMUA_Achr11P...	Banana	cytosol	46.31	54.51
GSMUA_Achr8P10090_001	Banana	cytosol	55.1	53.63
CDX92656	Canola	cytosol	21.55	52.9
GSMUA_Achr3P00740_001	Banana	mitochondrion	57.09	52.66
Zm00001d007139_P007	Maize	cytosol, plastid	51.51	51.56
TraesCS7B01G028300.1	Wheat	cytosol	38.37	51.46
HORVU2Hr1G019730.5	Barley	cytosol, plastid	51.04	51.43
EES16128	Sorghum	cytosol, plastid	44.99	51.07
TraesCS2A01G113900.1	Wheat	cytosol	52.55	50.5
Os07t0672500-02	Rice	cytosol, plastid	51.51	50.42
TraesCS2B01G132900.3	Wheat	cytosol, plastid	52.27	50.27
OQU90457	Sorghum	cytosol, plastid	51.89	50.18
KXG29076	Sorghum	plastid	58.51	50.12
TraesCS2D01G114500.1	Wheat	cytosol, plastid	52.74	49.21
Zm00001d007698_P002	Maize	plastid	58.41	48.82
TraesCS4D01G145100.12	Wheat	plastid	56.52	48.7
TraesCS4A01G169300.15	Wheat	plastid	56.62	48.58
Zm00001d048689_P004	Maize	plastid	57.37	48.41
EER92288	Sorghum	cytosol	50.66	48.29
TraesCS4B01G126300.7	Wheat	nucleus	57.09	48.01
TraesCS4B01G155600.1	Wheat	cytosol	49.91	48.0
TraesCS4A01G142800.3	Wheat	cytosol	49.72	47.86
TraesCS4D01G168600.1	Wheat	cytosol	49.81	47.61
Zm00001d029120_P004	Maize	cytosol	50.47	47.42
Zm00001d047494_P007	Maize	cytosol	49.05	46.93
TraesCS7D01G127200.1	Wheat	cytosol	43.76	46.86
HORVU4Hr1G033300.1	Barley	cytosol	57.09	46.64
HORVU4Hr1G046420.6	Barley	cytosol, plastid	50.19	45.97
TraesCS7A01G128400.2	Wheat	cytosol, plastid	44.05	45.96
CDY24618	Canola	endoplasmic reticulum	11.63	43.77
OQU79278	Sorghum	cytosol, plastid	37.62	43.17
CDY71574	Canola	endoplasmic reticulum, plasma membrane	15.88	42.86
CDX92836	Canola	endoplasmic reticulum, plasma membrane	15.78	42.71
CDY29857	Canola	endoplasmic reticulum, plasma membrane	15.78	42.71
CDY19035	Canola	endoplasmic reticulum	15.78	42.6
CDY30236	Canola	endoplasmic reticulum	15.78	42.6
CDY55344	Canola	endoplasmic reticulum	15.78	42.6
CDY14372	Canola	endoplasmic reticulum	15.69	41.81
CDY20251	Canola	endoplasmic reticulum	15.6	41.04
CDY38752	Canola	endoplasmic reticulum	14.84	40.67
CDY49165	Canola	extracellular, plasma membrane	29.4	39.82
CDY56163	Canola	extracellular, vacuole	30.15	39.63
CDY51824	Canola	extracellular, plasma membrane	30.06	39.45
CDY19639	Canola	extracellular, vacuole	29.87	39.35
CDY47077	Canola	endoplasmic reticulum, plasma membrane	14.37	39.07
CDY08360	Canola	endoplasmic reticulum	30.34	38.63
CDY38192	Canola	plasma membrane	30.34	38.63
CDX96166	Canola	cytosol	24.39	38.0
CDY18925	Canola	plastid	12.1	35.36
CDX89214	Canola	extracellular, plasma membrane	25.33	35.36
CDX84641	Canola	cytosol	12.29	34.67
CDX92857	Canola	endoplasmic reticulum, extracellular, plasma membrane	22.87	34.38
CDX79566	Canola	cytosol	12.19	34.31
CDY29873	Canola	endoplasmic reticulum, extracellular, plasma membrane	22.68	34.24
CDY17260	Canola	cytosol	12.38	34.2
CDX84306	Canola	cytosol	12.38	33.94
CDY19014	Canola	endoplasmic reticulum, extracellular	22.78	33.57
CDY45052	Canola	mitochondrion	29.02	30.73
CDX74745	Canola	cytosol	13.71	30.53
CDY03591	Canola	cytosol, mitochondrion, plastid	28.64	30.33
CDY33415	Canola	cytosol, mitochondrion	29.11	30.32
CDY42204	Canola	cytosol, mitochondrion, plastid	29.21	29.68
CDX95077	Canola	cytosol	11.81	29.0
CDX93578	Canola	cytosol	11.72	28.84
CDY37590	Canola	cytosol	13.71	28.38
CDY31186	Canola	cytosol	11.63	28.34
CDY38662	Canola	cytosol	13.8	28.29
CDX71438	Canola	cytosol	11.44	28.21
CDY04504	Canola	cytosol	11.44	28.01
CDX79393	Canola	cytosol	13.99	27.98
CDX83275	Canola	cytosol	11.44	27.94
CDY57698	Canola	cytosol	13.99	27.87
CDY37046	Canola	cytosol	13.33	27.59
CDY28494	Canola	plastid	15.78	25.77
CDY34176	Canola	plastid	15.69	25.62
CDY27380	Canola	nucleus	13.61	19.41
CDX89934	Canola	cytosol	0.38	1.53

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078DQY0	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	EnsemblPlants:CDX91317	ProteinID:CDX91317	ProteinID:CDX91317.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	EnsemblPlantsGene:GSBRNA2T00152583001	InterPro:P-loop_NTPase	PFAM:PF00004
ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF138	SMART:SM00382	InterPro:SMAD_FHA_dom_sf	SUPFAM:SSF49879
SUPFAM:SSF52540	UniParc:UPI0004EF0B74	SEG:seg	:	:	:

Description

BnaC02g27280D

Coordinates

chrLK031866:+:1447383..1453707

Molecular Weight (calculated)

115384.0 Da

IEP (calculated)

6.848

GRAVY (calculated)

-0.338

Length

1058 amino acids

Sequence
(BLAST)

0001: MVETRRSSSA SKRFCSSSSS PEPSSSSPRP SKRSKVKIDA ALEPAAAGST SASEENQGPV SDPGEPELGS SDPHAEKTVA TDVPVMENSP GDDEVLAGEV
0101: VAEGERSKAG KKRPNAPWAK LLSQYPQNPH RIMRGPVFTV GRLGCNLSIK DHSMPTTLCE LKQAKHGAPS VASLEITGNG FLVQVNGKCY HKSSCVHLRG
0201: GDEVIFSVSG RHAYIFQPLK DENLAAPDKA SSVNLCEARV APLKGVHVET RAGDSSAVRS VLDIRGISKL LDERREVSES LRDSYLSSTI STRRQAFKDS
0301: LRGGVLKAQD IEVSLEKFPY FLSATTKDVL IASMYVHMKG GSKFSKYASD LPTTCPRILL SGPAGSDIYQ EILAKALAKH FGAKVMIVDS LLLPGGSPAR
0401: EAESSKESDR VKFLGPPSSA VSSLQGSPLR GPTIGFHGKV VLAFEDNCSS KIGIRFERPV PDGNDLGGLC EEDHGFFCAA SSLRLDGSSG DDADRLAVNE
0501: IFEVALSEGE GGSLILFLKD IEKSLVGNND VYATLKSKLE NLPENIVVMA SQTQLDSRKE KSHPGGFLYT KFGCNQTALL DLAFPDIGKL HEKSKEASKS
0601: VKQITRLFPN KVAIQLPQDE ALLLDWKEKL DRDTELLKVQ ANITSILGIL SKNRLDCPDL ETLCIKDQSL LPESVEKVVG WAFSHHLMNC SEPTIKDNKL
0701: VISAESITYG LQMLHGVQNE NKSLKKFLKD VVTENEFEKK LLSDVIPPSD IGVSFDDIGA LENVKDALKE LVMLPLQRPE LFGKGQLTKP TKGILLFGPP
0801: GTGKTMLAKA VATEAGANFI NISMSSITSK WFGEGEKYVK AVFSLASKIA PSVIFVDEVD SMLGRRENPG EHEAMRKMKN EFMVNWDGLR TKDRERVLVL
0901: AATNRPFDLD EAVIRRLPRR LMVNLPDATN RSKILSVILS KEEMAPDVDL EAIANMTDGY SGSDLKNLCV TAAHLPIREI LEKEKKEKTA AEAENRPKPS
1001: LYRCTDIRPL TMNDFKAAHE QVCASVSTDS SNTNELQQWN ELYGEGGSRK KTSLSYFM

Best Arabidopsis Sequence Match ( AT1G02890.1 )
(BLAST)

0001: MVDTRRSSSA SKRFCAATSS SSRPTKRSKA AAEPASSSSA SEVPIDNQAP VSDPGSISGD PELRTSDPQS NDAERPVTTT DVPAMETDTN PELEGLVTPT
0101: PAGEVVVEAE KSKSSKKRIA KAPWAKLLSQ FPQNPHLVMR GSVFTVGRRA CDLCIRDHSM PNVLCELRQS EHGGPSVASL EIIGNGVLVQ VNGKIYQRST
0201: CVHLRGGDEI IFTTPGKHAY IFQPLKDENL AAPDRTSSLS LFEAQSAPLK GLHVETRARD SSSVDGTASL LASISKLQNV PFLPPTAKSV KRQQNSEVPV
0301: LPSSCDDFIL DVDLNDADSN NDHAAIASME KTVASTSCAA NDDHDADGNG MDPFQEPEAG NIPDPAYEIR PILSLLGDPS EFDLRGSISK ILVDERREVR
0401: EMPKEYERPS ASVLTRRQAH KDSLRGGILN PQDIEVSFEN FPYFLSGTTK DVLMISTYAH IKYGKEYAEY ASDLPTACPR ILLSGPSGSE IYQEMLAKAL
0501: AKQCGAKLMI VDSLLLPGGS TPKEADTTKE SSRRERLSVL AKRAVQAAQA AVLQHKKPIS SVEAGITGGS TLSSQAVRRQ EVSTATSKSY TFKAGDRVRF
0601: LGPSTSSLAS LRAPPRGPAT GFQGKVLLAF EGNGSSKIGV RFDRSIPDGN DLGGLCEEDH GFFCTASSLR LESSSSDDAD KLAINEIFEV AFNESERGSL
0701: ILFLKDIEKS VSGNTDVYIT LKSKLENLPE NIVVIASQTQ LDNRKEKSHP GGFLFTKFGS NQTALLDLAF PDTFGGRLQD RNTEMPKAVK QITRLFPNKV
0801: TIQLPEDEAS LVDWKDKLER DTEILKAQAN ITSIRAVLSK NQLVCPDIEI LCIKDQTLPS DSVEKVVGFA FNHHLMNCSE PTVKDNKLII SAESITYGLQ
0901: LLHEIQNENK STKKSLKDVV TENEFEKKLL SDVIPPSDIG VSFSDIGALE NVKDTLKELV MLPLQRPELF GKGQLTKPTK GILLFGPPGT GKTMLAKAVA
1001: TEAGANFINI SMSSITSKWF GEGEKYVKAV FSLASKIAPS VIFVDEVDSM LGRRENPGEH EAMRKMKNEF MINWDGLRTK DKERVLVLAA TNRPFDLDEA
1101: VIRRLPRRLM VNLPDSANRS KILSVILAKE EMAEDVDLEA IANMTDGYSG SDLKNLCVTA AHLPIREILE KEKKERSVAQ AENRAMPQLY SSTDVRPLNM
1201: NDFKTAHDQV CASVASDSSN MNELQQWNEL YGEGGSRKKT SLSYFM

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:F4HZ82]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.