Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92857 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 97.29 | 96.88 |
| CDY19014 | Canola | endoplasmic reticulum, extracellular | 90.3 | 88.16 |
| CDX89214 | Canola | extracellular, plasma membrane | 91.58 | 84.7 |
| Bra024235.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 98.57 | 84.17 |
| AT4G28000.2 | Thale cress | extracellular | 88.87 | 74.88 |
| CDY19639 | Canola | extracellular, vacuole | 77.75 | 67.87 |
| CDY51824 | Canola | extracellular, plasma membrane | 77.46 | 67.37 |
| CDY56163 | Canola | extracellular, vacuole | 77.32 | 67.33 |
| CDY49165 | Canola | extracellular, plasma membrane | 74.89 | 67.22 |
| Solyc03g007760.2.1 | Tomato | endoplasmic reticulum | 66.19 | 56.17 |
| KRH38312 | Soybean | endoplasmic reticulum | 65.05 | 55.81 |
| VIT_16s0050g01850.t01 | Wine grape | endoplasmic reticulum, vacuole | 66.62 | 55.79 |
| PGSC0003DMT400051401 | Potato | endoplasmic reticulum | 65.76 | 55.54 |
| KRH08780 | Soybean | extracellular, plasma membrane | 64.34 | 55.2 |
| CDY08360 | Canola | endoplasmic reticulum | 64.19 | 54.15 |
| CDY38192 | Canola | plasma membrane | 63.91 | 53.91 |
| CDX96166 | Canola | cytosol | 50.21 | 51.84 |
| Os01t0226400-01 | Rice | plasma membrane | 60.91 | 50.83 |
| HORVU3Hr1G030770.20 | Barley | cytosol, vacuole | 60.48 | 50.42 |
| TraesCS3D01G159200.1 | Wheat | cytosol, vacuole | 59.91 | 50.24 |
| TraesCS3A01G151300.2 | Wheat | cytosol, vacuole | 60.2 | 50.24 |
| Zm00001d008983_P001 | Maize | vacuole | 60.2 | 49.88 |
| TraesCS3B01G178200.1 | Wheat | cytosol, vacuole | 59.77 | 49.88 |
| Zm00001d039315_P003 | Maize | vacuole | 59.63 | 49.7 |
| EES00021 | Sorghum | endoplasmic reticulum | 59.91 | 49.59 |
| GSMUA_Achr9P05420_001 | Banana | cytosol, mitochondrion | 43.37 | 46.63 |
| KRH08789 | Soybean | cytosol | 19.83 | 41.49 |
| KRH08796 | Soybean | cytosol | 9.56 | 38.51 |
| CDX92656 | Canola | cytosol | 17.12 | 27.84 |
| CDX91317 | Canola | plastid | 34.24 | 22.68 |
| CDY38752 | Canola | endoplasmic reticulum | 12.41 | 22.54 |
| CDX92836 | Canola | endoplasmic reticulum, plasma membrane | 12.41 | 22.25 |
| CDY29857 | Canola | endoplasmic reticulum, plasma membrane | 12.41 | 22.25 |
| CDY71574 | Canola | endoplasmic reticulum, plasma membrane | 12.41 | 22.19 |
| CDX90936 | Canola | plastid | 34.38 | 22.03 |
| CDY32485 | Canola | plastid | 33.81 | 21.51 |
| CDY19035 | Canola | endoplasmic reticulum | 11.98 | 21.43 |
| CDX97266 | Canola | plastid | 34.52 | 21.4 |
| CDY47077 | Canola | endoplasmic reticulum, plasma membrane | 11.84 | 21.34 |
| CDY30236 | Canola | endoplasmic reticulum | 11.84 | 21.17 |
| CDY55344 | Canola | endoplasmic reticulum | 11.84 | 21.17 |
| CDX89933 | Canola | plastid | 33.81 | 20.5 |
| CDY14372 | Canola | endoplasmic reticulum | 11.55 | 20.4 |
| CDY50381 | Canola | plastid | 34.66 | 20.23 |
| CDY20251 | Canola | endoplasmic reticulum | 11.55 | 20.15 |
| CDY22053 | Canola | plastid | 35.24 | 20.1 |
| CDY18018 | Canola | plastid | 34.81 | 20.0 |
| CDY18129 | Canola | cytosol, plastid | 34.24 | 19.77 |
| CDY03591 | Canola | cytosol, mitochondrion, plastid | 27.96 | 19.62 |
| CDY45052 | Canola | mitochondrion | 27.96 | 19.62 |
| CDY18925 | Canola | plastid | 10.13 | 19.61 |
| CDX84306 | Canola | cytosol | 10.56 | 19.17 |
| CDY17260 | Canola | cytosol | 10.41 | 19.06 |
| CDX84641 | Canola | cytosol | 10.13 | 18.93 |
| CDX79566 | Canola | cytosol | 9.99 | 18.62 |
| CDY33415 | Canola | cytosol, mitochondrion | 26.53 | 18.31 |
| CDX74745 | Canola | cytosol | 12.13 | 17.89 |
| CDY42204 | Canola | cytosol, mitochondrion, plastid | 26.53 | 17.87 |
| CDY24618 | Canola | endoplasmic reticulum | 6.7 | 16.73 |
| CDY37046 | Canola | cytosol | 11.98 | 16.44 |
| CDX93578 | Canola | cytosol | 9.99 | 16.28 |
| CDX95077 | Canola | cytosol | 9.99 | 16.24 |
| CDY04504 | Canola | cytosol | 9.7 | 15.74 |
| CDX83275 | Canola | cytosol | 9.7 | 15.7 |
| CDY31186 | Canola | cytosol | 9.7 | 15.67 |
| CDX71438 | Canola | cytosol | 9.56 | 15.62 |
| CDY28494 | Canola | plastid | 14.41 | 15.59 |
| CDY34176 | Canola | plastid | 14.41 | 15.59 |
| CDY38662 | Canola | cytosol | 11.41 | 15.5 |
| CDX79393 | Canola | cytosol | 11.7 | 15.5 |
| CDY57698 | Canola | cytosol | 11.7 | 15.44 |
| CDY37590 | Canola | cytosol | 11.13 | 15.26 |
| CDY27380 | Canola | nucleus | 12.13 | 11.46 |
| CDX89934 | Canola | cytosol | 0.57 | 1.53 |
Protein Annotations
| EnsemblPlants:CDY29873 | EnsemblPlantsGene:GSBRNA2T00044320001 | Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | GO:A0A078GZ53 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:ATPase_AAA_core | InterPro:P-loop_NTPase | ncoils:Coil |
| PANTHER:PTHR23074 | PANTHER:PTHR23074:SF98 | PFAM:PF00004 | ProteinID:CDY29873 | ProteinID:CDY29873.1 | SEG:seg |
| SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI0004EE563F | UniProt:A0A078GZ53 | MapMan:35.2 | : |
Description
BnaA03g48940DBnaA03g48940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZ53]
Coordinates
chrLK032245:+:249686..253791
Molecular Weight (calculated)
78156.0 Da
IEP (calculated)
5.942
GRAVY (calculated)
-0.460
Length
701 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQKSVLFSA LGVGVGLGLG LASGQGLGKW ANGSVSAEDG LTGEKIEQEL VRQIVDGRES GVTFDEFPYF LSEKTRLLLT NAAYVHLKQF DISKHTRNLA
101: PASKAILLSG PAEFYQQMLA KALAHYFESK LLLLDVTDFS IKIQSKYGCV KKEPSHKRSI SELTLDKMSN LVGSFSMLTQ REQPRGTLRR LTSGNDLTSR
201: GFEGSSHPPQ LKRNASAASD ISSISSRSGT SVSASSKRST NLCFDERLFL QSLYKVLVSV SEANPIIIYL RDVEKLLQSE RFYKLFQKLL SKLSGPVLLL
301: GSRLLEPEDD CQQVGEGISA LFPYNIEIRP PEDESQLMSW KTRFEDDMKL IQFQDNKNHI AEVLAANDLE CDDLGSVCHA DTMFLSSHIE EIVVTAISYH
401: LMNNKEPEYK NGRLVISSNS LSHGLSIFQE GHSCHGNSLK MDRNSDSKGE ESEGMINSEL KSETTPSEKN ECPLPPKVPV NEVPPDNEFE KRIRPETKPK
501: NHFKSLGILL FGPPGTGKTM MAKAIANEAG ASFINVPFDL DEAIIRRFER RIMVGLPSVE SREKILRTLL SKEKTENLDF HELAQMTDGY SGSDLKNFCT
601: TAAYRPVREL IKHECLKDQE RKKREEAEKS SSEEGTEAKE EASEERVITL RALSMEDMRV AKSQVAASFA AEGAGMNELK QWNELYGEGG SRKQEQLSYF
701: L
101: PASKAILLSG PAEFYQQMLA KALAHYFESK LLLLDVTDFS IKIQSKYGCV KKEPSHKRSI SELTLDKMSN LVGSFSMLTQ REQPRGTLRR LTSGNDLTSR
201: GFEGSSHPPQ LKRNASAASD ISSISSRSGT SVSASSKRST NLCFDERLFL QSLYKVLVSV SEANPIIIYL RDVEKLLQSE RFYKLFQKLL SKLSGPVLLL
301: GSRLLEPEDD CQQVGEGISA LFPYNIEIRP PEDESQLMSW KTRFEDDMKL IQFQDNKNHI AEVLAANDLE CDDLGSVCHA DTMFLSSHIE EIVVTAISYH
401: LMNNKEPEYK NGRLVISSNS LSHGLSIFQE GHSCHGNSLK MDRNSDSKGE ESEGMINSEL KSETTPSEKN ECPLPPKVPV NEVPPDNEFE KRIRPETKPK
501: NHFKSLGILL FGPPGTGKTM MAKAIANEAG ASFINVPFDL DEAIIRRFER RIMVGLPSVE SREKILRTLL SKEKTENLDF HELAQMTDGY SGSDLKNFCT
601: TAAYRPVREL IKHECLKDQE RKKREEAEKS SSEEGTEAKE EASEERVITL RALSMEDMRV AKSQVAASFA AEGAGMNELK QWNELYGEGG SRKQEQLSYF
701: L
001: MDSKQMLLSA LGVGVGVGVG LGLASGQAVG KWAGGNSSSN NAVTADKMEK EILRQVVDGR ESKITFDEFP YYLSEQTRVL LTSAAYVHLK HFDASKYTRN
101: LSPASRAILL SGPAELYQQM LAKALAHFFD AKLLLLDVND FALKIQSKYG SGNTESSSFK RSPSESALEQ LSGLFSSFSI LPQREESKAG GTLRRQSSGV
201: DIKSSSMEGS SNPPKLRRNS SAAANISNLA SSSNQVSAPL KRSSSWSFDE KLLVQSLYKV LAYVSKANPI VLYLRDVENF LFRSQRTYNL FQKLLQKLSG
301: PVLILGSRIV DLSSEDAQEI DEKLSAVFPY NIDIRPPEDE THLVSWKSQL ERDMNMIQTQ DNRNHIMEVL SENDLICDDL ESISFEDTKV LSNYIEEIVV
401: SALSYHLMNN KDPEYRNGKL VISSISLSHG FSLFREGKAG GREKLKQKTK EESSKEVKAE SIKPETKTES VTTVSSKEEP EKEAKAEKVT PKAPEVAPDN
501: EFEKRIRPEV IPAEEINVTF KDIGALDEIK ESLQELVMLP LRRPDLFTGG LLKPCRGILL FGPPGTGKTM LAKAIAKEAG ASFINVSMST ITSKWFGEDE
601: KNVRALFTLA SKVSPTIIFV DEVDSMLGQR TRVGEHEAMR KIKNEFMSHW DGLMTKPGER ILVLAATNRP FDLDEAIIRR FERRIMVGLP AVENREKILR
701: TLLAKEKVDE NLDYKELAMM TEGYTGSDLK NLCTTAAYRP VRELIQQERI KDTEKKKQRE PTKAGEEDEG KEERVITLRP LNRQDFKEAK NQVAASFAAE
801: GAGMGELKQW NELYGEGGSR KKEQLTYFL
101: LSPASRAILL SGPAELYQQM LAKALAHFFD AKLLLLDVND FALKIQSKYG SGNTESSSFK RSPSESALEQ LSGLFSSFSI LPQREESKAG GTLRRQSSGV
201: DIKSSSMEGS SNPPKLRRNS SAAANISNLA SSSNQVSAPL KRSSSWSFDE KLLVQSLYKV LAYVSKANPI VLYLRDVENF LFRSQRTYNL FQKLLQKLSG
301: PVLILGSRIV DLSSEDAQEI DEKLSAVFPY NIDIRPPEDE THLVSWKSQL ERDMNMIQTQ DNRNHIMEVL SENDLICDDL ESISFEDTKV LSNYIEEIVV
401: SALSYHLMNN KDPEYRNGKL VISSISLSHG FSLFREGKAG GREKLKQKTK EESSKEVKAE SIKPETKTES VTTVSSKEEP EKEAKAEKVT PKAPEVAPDN
501: EFEKRIRPEV IPAEEINVTF KDIGALDEIK ESLQELVMLP LRRPDLFTGG LLKPCRGILL FGPPGTGKTM LAKAIAKEAG ASFINVSMST ITSKWFGEDE
601: KNVRALFTLA SKVSPTIIFV DEVDSMLGQR TRVGEHEAMR KIKNEFMSHW DGLMTKPGER ILVLAATNRP FDLDEAIIRR FERRIMVGLP AVENREKILR
701: TLLAKEKVDE NLDYKELAMM TEGYTGSDLK NLCTTAAYRP VRELIQQERI KDTEKKKQRE PTKAGEEDEG KEERVITLRP LNRQDFKEAK NQVAASFAAE
801: GAGMGELKQW NELYGEGGSR KKEQLTYFL
Arabidopsis Description
p-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I5A3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.