CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50381	Canola	plastid	93.25	95.42
Bra036265.1-P	Field mustard	plastid	97.8	93.18
CDX90936	Canola	plastid	80.23	90.13
CDX91317	Canola	plastid	75.67	87.9
CDX97266	Canola	plastid	80.07	87.0
CDY18018	Canola	plastid	84.87	85.49
AT4G02480.1	Thale cress	plastid	87.55	85.06
Os11t0661400-01	Rice	cytosol	16.6	84.65
Zm00001d029385_P001	Maize	cytosol	12.45	80.1
CDY18129	Canola	cytosol, plastid	75.43	76.36
CDX89933	Canola	plastid	71.03	75.52
CDY32485	Canola	plastid	67.7	75.5
Zm00001d049686_P001	Maize	plastid	14.0	71.97
TraesCS1B01G120800.1	Wheat	cytosol	13.43	65.22
GSMUA_Achr11P...	Banana	cytosol	37.02	64.54
KRH71559	Soybean	cytosol	57.61	64.01
Solyc09g074950.2.1	Tomato	plastid	63.3	62.89
KRH71560	Soybean	nucleus	63.14	62.43
KRH31895	Soybean	nucleus	62.49	61.59
Solyc06g084530.2.1	Tomato	extracellular, nucleus	62.57	61.47
KRH31896	Soybean	nucleus	61.11	61.26
VIT_07s0005g00200.t01	Wine grape	plastid	64.04	61.15
HORVU7Hr1G026880.14	Barley	cytosol	22.54	59.57
Os03t0344700-01	Rice	cytosol	37.1	58.84
GSMUA_Achr8P33760_001	Banana	cytosol	52.73	58.7
GSMUA_Achr11P...	Banana	cytosol	42.55	58.18
GSMUA_Achr3P00740_001	Banana	mitochondrion	53.05	56.84
GSMUA_Achr8P10090_001	Banana	cytosol	50.12	56.67
EES16128	Sorghum	cytosol, plastid	40.76	53.76
KXG29076	Sorghum	plastid	53.78	53.52
HORVU2Hr1G019730.5	Barley	cytosol, plastid	45.16	52.86
TraesCS4D01G145100.12	Wheat	plastid	52.81	52.85
CDX92656	Canola	cytosol	18.47	52.67
TraesCS4A01G169300.15	Wheat	plastid	52.48	52.31
Zm00001d007698_P002	Maize	plastid	53.86	52.29
Zm00001d007139_P007	Maize	cytosol, plastid	44.67	51.94
TraesCS7B01G028300.1	Wheat	cytosol	33.28	51.84
Zm00001d048689_P004	Maize	plastid	52.81	51.75
TraesCS4B01G126300.7	Wheat	nucleus	52.81	51.59
TraesCS2A01G113900.1	Wheat	cytosol	46.05	51.41
Os07t0672500-02	Rice	cytosol, plastid	45.08	51.25
TraesCS2B01G132900.3	Wheat	cytosol, plastid	45.81	51.18
OQU90457	Sorghum	cytosol, plastid	45.48	51.1
HORVU4Hr1G033300.1	Barley	cytosol	52.81	50.12
TraesCS2D01G114500.1	Wheat	cytosol, plastid	46.14	50.0
EER92288	Sorghum	cytosol	44.59	49.37
TraesCS4B01G155600.1	Wheat	cytosol	43.53	48.64
TraesCS4A01G142800.3	Wheat	cytosol	43.45	48.59
Zm00001d029120_P004	Maize	cytosol	44.43	48.49
TraesCS4D01G168600.1	Wheat	cytosol	43.53	48.33
Zm00001d047494_P007	Maize	cytosol	43.12	47.92
TraesCS7D01G127200.1	Wheat	cytosol	38.08	47.37
TraesCS7A01G128400.2	Wheat	cytosol, plastid	38.65	46.84
HORVU4Hr1G046420.6	Barley	cytosol, plastid	43.94	46.75
OQU79278	Sorghum	cytosol, plastid	33.93	45.23
CDY24618	Canola	endoplasmic reticulum	10.17	44.48
CDY71574	Canola	endoplasmic reticulum, plasma membrane	13.67	42.86
CDX92836	Canola	endoplasmic reticulum, plasma membrane	13.59	42.71
CDY29857	Canola	endoplasmic reticulum, plasma membrane	13.59	42.71
CDY19035	Canola	endoplasmic reticulum	13.51	42.35
CDY30236	Canola	endoplasmic reticulum	13.51	42.35
CDY55344	Canola	endoplasmic reticulum	13.51	42.35
CDY14372	Canola	endoplasmic reticulum	13.59	42.07
CDY38752	Canola	endoplasmic reticulum	13.1	41.71
CDY20251	Canola	endoplasmic reticulum	13.51	41.29
CDY56163	Canola	extracellular, vacuole	26.85	40.99
CDY49165	Canola	extracellular, plasma membrane	26.04	40.97
CDY51824	Canola	extracellular, plasma membrane	26.77	40.82
CDY19639	Canola	extracellular, vacuole	26.53	40.6
CDY47077	Canola	endoplasmic reticulum, plasma membrane	12.69	40.1
CDY08360	Canola	endoplasmic reticulum	27.01	39.95
CDY38192	Canola	plasma membrane	27.01	39.95
CDX96166	Canola	cytosol	21.24	38.44
CDX89214	Canola	extracellular, plasma membrane	22.62	36.68
CDX92857	Canola	endoplasmic reticulum, extracellular, plasma membrane	20.26	35.37
CDY18925	Canola	plastid	10.41	35.36
CDY29873	Canola	endoplasmic reticulum, extracellular, plasma membrane	20.1	35.24
CDY19014	Canola	endoplasmic reticulum, extracellular	20.42	34.96
CDX84641	Canola	cytosol	10.66	34.93
CDX79566	Canola	cytosol	10.58	34.57
CDY17260	Canola	cytosol	10.74	34.46
CDX84306	Canola	cytosol	10.74	34.2
CDY45052	Canola	mitochondrion	25.71	31.63
CDX74745	Canola	cytosol	12.21	31.58
CDY03591	Canola	cytosol, mitochondrion, plastid	25.55	31.43
CDY33415	Canola	cytosol, mitochondrion	25.79	31.2
CDY42204	Canola	cytosol, mitochondrion, plastid	25.87	30.55
CDY37046	Canola	cytosol	12.04	28.96
CDX95077	Canola	cytosol	10.01	28.54
CDX93578	Canola	cytosol	9.93	28.37
CDY31186	Canola	cytosol	9.85	27.88
CDY37590	Canola	cytosol	11.55	27.79
CDX71438	Canola	cytosol	9.68	27.74
CDY38662	Canola	cytosol	11.64	27.71
CDY04504	Canola	cytosol	9.68	27.55
CDX83275	Canola	cytosol	9.68	27.48
CDX79393	Canola	cytosol	11.8	27.41
CDY57698	Canola	cytosol	11.8	27.31
CDY28494	Canola	plastid	13.91	26.39
CDY34176	Canola	plastid	13.91	26.39
CDY27380	Canola	nucleus	12.29	20.35
CDX89934	Canola	cytosol	0.33	1.53

Protein Annotations

Gene3D:1.10.8.60	Gene3D:2.60.200.20	Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078GBL5	UniProt:A0A078GBL5
InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	EnsemblPlants:CDY22053	ProteinID:CDY22053	ProteinID:CDY22053.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
EnsemblPlantsGene:GSBRNA2T00018431001	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF70
SMART:SM00382	InterPro:SMAD_FHA_dom_sf	SUPFAM:SSF49879	SUPFAM:SSF52540	UniParc:UPI0004EE296D	SEG:seg

Description

BnaA09g00820DBnaA09g00820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBL5]

Coordinates

chrLK032127:-:363436..370110

Molecular Weight (calculated)

132831.0 Da

IEP (calculated)

5.800

GRAVY (calculated)

-0.390

Length

1229 amino acids

Sequence
(BLAST)

0001: MVETRSSSSA SKRFCSSSSP EPSASSPRPS KRSKVKIDAA STAIESASAA AEPAGSSSAS EVPIENQGPG SDPGSESGEP ELRSSDPQQG VDAAEKPVVL
0101: TDVPLREASP ETDANPEVDV LATPTVAEEV VADGEKSKAG KKRAKAPWAK LLSQYPQNPH RIMRGPVFTV GRRGCDLSIK DQSMPSSLCE LKQAENGGPS
0201: VATLEITGNG VLVQVNGKCY QKGALVHLRG GDEVIFNISG RHAYIFQPLK DENQAAPDRA SSQILFEARG GRVHSETRAG ESSAVDGASI LASLSKYRNL
0301: HLRPPIAKSA KRQQNPEVPQ EPPSCNDCTS DTDMNDADSN NDHAAAIASV EKAAASTSYT ANENLNADGS GLDPFQEADG ISKLLDERRE VRELLKEFDI
0401: SSTISTRRQA FKDSLRGGVL MAQNIDVSLD NFPYFLSATT KDVLIASMYV HMKGGSKFAK YASDLPTTSP RILLSGPAGS EIYQEMLAKA LAKNFGAKLM
0501: IVDSLLLPGG SPAREAESSK EGSRRERLSM LAKRAVQAAQ ALQHKKPTSS VDADITGGST LGSQALPKQE VSTATSKSDR VKFLGPSSSA ISSLQGPPLR
0601: GPTIGFQGKV VLAFEDNSSS KIGIRFDRPV PDGNDLGGLC EEDHGFFCAA SSLRLDGSSG DDADKLAINE IFEVALSEAE GGSLILFLKD IEKSLVGNSD
0701: VYATLKGKLE SLPENIVVMA SQTQLDTRKE KAHPGGFLFT KFGGNQTALL DLAFPDNFSK LHDRSKETPK SMKQITRLFP NKVAIQLPQD EALLVDWKEK
0801: LDRDTELLKV QANITSILGV LTKNRLDCPD LGTLCIKDQT LLPESAEKVV GWAFSHHLMN CSEPIVKDNK LVISAESITY GLQMLQGVQN ENKSLKKSLK
0901: DVVTENEFEK KLLSDVIPPS DIGVSFDDIG ALKNVKDTLK ELVMLPLQRP ELFDKGQLTK PTKGILLFGP PGTGKTMLAK AVATEAGANF INISMSSITS
1001: KWFGEGEKYV KAVFSLASKI APSVIFVDEV DSMLGRRENP GEHEAMRKMK NEFMINWDGL RTKDRERVLV LAATNRPFDL DEAVIRRLPR RLMVNLPDAT
1101: NRAKILSVIL AKEEIGPDVD LEAIANMTDG YSGSDLKNLC VTAAHLPIRE ILEKEKKEKT AAEAENRPTP PLYSCTDIRP LTMTDFKAAH DQVCASVSTD
1201: SSNMNELQQW NELYGEGGSR KKTSLSYFM

Best Arabidopsis Sequence Match ( AT4G02480.1 )
(BLAST)

0001: MVETRRSSSA SKRFCASSSS PEASSSQRPN KRSKVKIDAA ASSLEPATAE PAGSSSASEV PIENQGPASD PGSESGEPEL GSSDPQAMDA EKPVVTTDVP
0101: VMENSPETDA NPEVEVLATP TVAGEAVADA DKSKAAKKRA LKAPWAKLLS QYSQNPHRVI RGPVFTVGRR GCDLSIRDQA MPSTLCELKQ SEHGGPSVAS
0201: LEILGNGVIV HVNGKCYQKS TCVHLRGGDE VIFSLNGKHA YIFQPVKDEN LAAPDRASSL SICEARGAPL KGVHVETRAG DVDGASDVDG ASILASLSKL
0301: RSFHLLPPIA KAGKRQQNPA VPVVPSSFND CISDTDMNDA DSNNDHAAVA SVEKIAAAST PGTANENLNV DGSGLDPFQE ADGGNVPAAG YEIRPIVHLL
0401: GESSSFDIRG SISRLLDERR EVKEFLREFD LSSTISTRRQ AFKDSLRGGV LNAQNIDISF ENFPYYLSAT TKGVLMISMY VHMNGGSKYA NFATDLTTAC
0501: PRILLSGPSG SEIYQEMLAK ALAKQFGAKL MIVDSLLLPG GSPAREAESS KEGSRRERLS MLAKRAVQAA QVLQHKKPTS SVDADITGGS TLSSQALPKQ
0601: EVSTATSKSY TFKAGDRVKF VGPSASAISS LQGQLRGPAI GSQGKVALAF EDNCASKIGI RFDRPVQDGN DLGGLCEEDH GFFCAASSLR LEGSSSDDAD
0701: KLAVNEIFEV ALSESEGGSL ILFLKDIEKS LVGNSDVYAT LKSKLETLPE NIVVIASQTQ LDSRKEKSHP GGFLFTKFGG NQTALLDLAF PDNFGKLHDR
0801: SKETPKSMKQ ITRLFPNKIA IQLPQEEALL SDWKEKLDRD TEILKVQANI TSILAVLAKN KLDCPDLGTL CIKDQTLPSE SVEKVVGWAF GHHLMICTEP
0901: IVKDNKLVIS AESISYGLQT LHDIQNENKS LKKSLKDVVT ENEFEKKLLS DVIPPSDIGV SFDDIGALEN VKETLKELVM LPLQRPELFD KGQLTKPTKG
1001: ILLFGPPGTG KTMLAKAVAT EAGANFINIS MSSITSKWFG EGEKYVKAVF SLASKIAPSV IFVDEVDSML GRRENPGEHE AMRKMKNEFM VNWDGLRTKD
1101: RERVLVLAAT NRPFDLDEAV IRRLPRRLMV NLPDATNRSK ILSVILAKEE IAPDVDLEAI ANMTDGYSGS DLKNLCVTAA HFPIREILEK EKKEKTAAQA
1201: ENRPTPPLYS CTDVRSLTMN DFKAAHDQVC ASVSSDSSNM NELQQWNELY GEGGSRKKTS LSYFM

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WM93]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.