CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032579.1-P	Field mustard	plastid	90.65	87.1
Os11t0661400-01	Rice	cytosol	18.51	84.65
Zm00001d029385_P001	Maize	cytosol	13.79	79.58
CDX89933	Canola	plastid	82.12	78.29
CDY18129	Canola	cytosol, plastid	83.21	75.54
CDX91317	Canola	plastid	71.87	74.86
CDX97266	Canola	plastid	74.95	73.03
CDX90936	Canola	plastid	71.96	72.49
AT1G02890.1	Thale cress	plastid	81.76	72.31
Zm00001d049686_P001	Maize	plastid	15.43	71.13
CDY18018	Canola	plastid	76.13	68.77
CDY22053	Canola	plastid	75.5	67.7
CDY50381	Canola	plastid	72.14	66.19
GSMUA_Achr11P...	Banana	cytosol	42.01	65.67
TraesCS1B01G120800.1	Wheat	cytosol	14.7	64.03
HORVU7Hr1G026880.14	Barley	cytosol	25.23	59.78
KRH71559	Soybean	cytosol	59.98	59.76
Os03t0344700-01	Rice	cytosol	42.01	59.74
KRH71560	Soybean	nucleus	65.43	58.0
Solyc09g074950.2.1	Tomato	plastid	64.79	57.72
KRH31895	Soybean	nucleus	64.7	57.18
VIT_07s0005g00200.t01	Wine grape	plastid	66.7	57.11
GSMUA_Achr11P...	Banana	cytosol	46.55	57.06
KRH31896	Soybean	nucleus	63.34	56.93
Solyc06g084530.2.1	Tomato	extracellular, nucleus	64.52	56.83
GSMUA_Achr8P33760_001	Banana	cytosol	56.53	56.43
GSMUA_Achr8P10090_001	Banana	cytosol	53.81	54.55
GSMUA_Achr3P00740_001	Banana	mitochondrion	56.72	54.49
TraesCS7B01G028300.1	Wheat	cytosol	38.48	53.74
CDX92656	Canola	cytosol	20.96	53.6
HORVU2Hr1G019730.5	Barley	cytosol, plastid	50.18	52.67
Zm00001d007139_P007	Maize	cytosol, plastid	50.0	52.13
TraesCS2A01G113900.1	Wheat	cytosol	51.63	51.68
TraesCS2B01G132900.3	Wheat	cytosol, plastid	51.36	51.45
Os07t0672500-02	Rice	cytosol, plastid	50.45	51.43
KXG29076	Sorghum	plastid	57.62	51.42
EES16128	Sorghum	cytosol, plastid	43.19	51.07
TraesCS4D01G145100.12	Wheat	plastid	56.53	50.73
TraesCS4A01G169300.15	Wheat	plastid	56.62	50.61
OQU90457	Sorghum	cytosol, plastid	50.0	50.37
TraesCS2D01G114500.1	Wheat	cytosol, plastid	51.63	50.18
Zm00001d007698_P002	Maize	plastid	57.44	50.0
TraesCS4B01G126300.7	Wheat	nucleus	56.99	49.92
Zm00001d048689_P004	Maize	plastid	56.44	49.6
TraesCS4A01G142800.3	Wheat	cytosol	48.37	48.5
HORVU4Hr1G033300.1	Barley	cytosol	56.9	48.42
TraesCS4B01G155600.1	Wheat	cytosol	48.28	48.36
TraesCS4D01G168600.1	Wheat	cytosol	48.46	48.24
EER92288	Sorghum	cytosol	48.28	47.93
TraesCS7D01G127200.1	Wheat	cytosol	42.92	47.87
TraesCS7A01G128400.2	Wheat	cytosol, plastid	43.74	47.53
Zm00001d029120_P004	Maize	cytosol	47.82	46.8
Zm00001d047494_P007	Maize	cytosol	46.55	46.38
HORVU4Hr1G046420.6	Barley	cytosol, plastid	48.28	46.06
CDY24618	Canola	endoplasmic reticulum	11.71	45.91
OQU79278	Sorghum	cytosol, plastid	37.3	44.58
CDY71574	Canola	endoplasmic reticulum, plasma membrane	15.15	42.6
CDX92836	Canola	endoplasmic reticulum, plasma membrane	15.06	42.46
CDY29857	Canola	endoplasmic reticulum, plasma membrane	15.06	42.46
CDY19035	Canola	endoplasmic reticulum	14.97	42.09
CDY30236	Canola	endoplasmic reticulum	14.97	42.09
CDY55344	Canola	endoplasmic reticulum	14.97	42.09
CDY14372	Canola	endoplasmic reticulum	14.7	40.81
CDY38752	Canola	endoplasmic reticulum	14.25	40.67
CDY56163	Canola	extracellular, vacuole	29.58	40.5
CDY51824	Canola	extracellular, plasma membrane	29.49	40.32
CDY49165	Canola	extracellular, plasma membrane	28.49	40.2
CDY20251	Canola	endoplasmic reticulum	14.61	40.05
CDY47077	Canola	endoplasmic reticulum, plasma membrane	14.07	39.85
CDY19639	Canola	extracellular, vacuole	28.95	39.73
CDY08360	Canola	endoplasmic reticulum	29.76	39.47
CDY38192	Canola	plasma membrane	29.76	39.47
CDX96166	Canola	cytosol	23.77	38.59
CDX84641	Canola	cytosol	12.25	36.0
CDY18925	Canola	plastid	11.8	35.91
CDX79566	Canola	cytosol	12.16	35.64
CDY17260	Canola	cytosol	12.34	35.51
CDX84306	Canola	cytosol	12.34	35.23
CDX89214	Canola	extracellular, plasma membrane	24.23	35.22
CDX92857	Canola	endoplasmic reticulum, extracellular, plasma membrane	21.78	34.09
CDY29873	Canola	endoplasmic reticulum, extracellular, plasma membrane	21.51	33.81
CDY19014	Canola	endoplasmic reticulum, extracellular	21.96	33.7
CDY03591	Canola	cytosol, mitochondrion, plastid	28.68	31.63
CDY45052	Canola	mitochondrion	28.49	31.43
CDY33415	Canola	cytosol, mitochondrion	28.86	31.3
CDX74745	Canola	cytosol	13.16	30.53
CDY42204	Canola	cytosol, mitochondrion, plastid	28.77	30.45
CDY37590	Canola	cytosol	13.79	29.75
CDY38662	Canola	cytosol	13.88	29.65
CDX79393	Canola	cytosol	14.16	29.49
CDX95077	Canola	cytosol	11.52	29.47
CDY57698	Canola	cytosol	14.16	29.38
CDX93578	Canola	cytosol	11.43	29.3
CDY37046	Canola	cytosol	13.16	28.38
CDX71438	Canola	cytosol	10.98	28.21
CDY04504	Canola	cytosol	10.98	28.01
CDX83275	Canola	cytosol	10.98	27.94
CDY31186	Canola	cytosol	10.98	27.88
CDY28494	Canola	plastid	15.7	26.7
CDY34176	Canola	plastid	15.7	26.7
CDY27380	Canola	nucleus	13.16	19.54
CDX89934	Canola	cytosol	0.36	1.53

Protein Annotations

Gene3D:1.10.8.60	Gene3D:2.60.200.20	Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078H1B2	UniProt:A0A078H1B2
InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	EnsemblPlants:CDY32485	ProteinID:CDY32485	ProteinID:CDY32485.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
EnsemblPlantsGene:GSBRNA2T00052461001	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23074	PANTHER:PTHR23074:SF70
SMART:SM00382	InterPro:SMAD_FHA_dom_sf	SUPFAM:SSF49879	SUPFAM:SSF52540	UniParc:UPI0004EF3E36	SEG:seg

Description

BnaA09g51110DBnaA09g51110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1B2]

Coordinates

chrLK032295:-:187176..193231

Molecular Weight (calculated)

121408.0 Da

IEP (calculated)

8.708

GRAVY (calculated)

-0.381

Length

1102 amino acids

Sequence
(BLAST)

0001: MVETRRSSSS ASKQLSPPPP ETPSSHSRPT KRSKAVSKSG EPELRASHPK TSDAERPMEN CCDTHIINPQ VQVLSEADKS KRGKKRSKAS PWAKLLSQYP
0101: QNPHRVMRGA VFTVGRRGCD LSIKDQSIPS VLCELRHSEH GEPSVASLEI VGNGVLVQVN GKIYQRRACV HLRGGDEVVF STLGKHAYII QSLKDENLAP
0201: PPDRASSFSI FGEQSAPLKG LHVETRAAGE DPSKFDSRGS ISKLPVDDRR EVKEMPKECD SSSASVSTRR QAHKDCLRAG VLNPQEIEDS FENFPYYLSG
0301: TTKDVLITST YVHMNCGSKF GKYAADLSTV CPRILLSGPA GSEIYQEMLA KSLAKKCGAK LMIVDTLLLP GGSTAKEADS TIESSRRERF SVLAKRAVQA
0401: AHVTVLKHKK PTPSVVADIT GGSTLSSQPV LRQEVSTASS KSYTFKTGDR VKFVGSSISS LPSFHSPLRY CLGPVLGFHG KVVLAFEDNA SSKIGVRFDK
0501: PIADGNDLGG LCEKDRGFFC AASSLRLDSY SSNDVDKLAI NEIFEVASNE SENGSLILFL KDIEKSVSGR IDVYATLKSK LENLPEKIVV IASQTQLDSR
0601: KEKSHPGGFL FTKLGSNQTA LLDLAFPENF GGRLQDRNKE MSKPVKQITK LFPNKVTIQL PEDEAFLLDW KEKLERDAEI LKAQANIAII RAVLSKNRLE
0701: CPALETLCIK DQSLPLDRVE KVVGWAFSFH LMSCSEPTIK DNKLIISVES ITYGLQVLHG IQNENKSTKK SLKDVVTENE FEKKLLSDVI PPSDIGVSFD
0801: DIGALENVKD TLKELVMLPL QRPELFGKGQ LTKPTKGILL FGPPGTGKTM LAKAVATEAG ANFINISMSS ITSKWFGEGE KYVKAVFSLA SKIAPSVIFV
0901: DEVDSMLGRR ENPGEHEAMR KMKNEFMINW DGLRTKDKER VLVLAATNRP FDLDEAVIRR LPRRLMVNLP DSANRSKILS VILAKEEMAE DVDIEAIANM
1001: TDGYSGSDLK NLCVTAAHLP IREILEKEKK ERSVAQAENR PMPLLYNSKD IRPLNMNDFK TAHEQVCASV STDSSNMNEL QQWNELYGEG GSRKKTSLSY
1101: FL

Best Arabidopsis Sequence Match ( AT1G02890.1 )
(BLAST)

0001: MVDTRRSSSA SKRFCAATSS SSRPTKRSKA AAEPASSSSA SEVPIDNQAP VSDPGSISGD PELRTSDPQS NDAERPVTTT DVPAMETDTN PELEGLVTPT
0101: PAGEVVVEAE KSKSSKKRIA KAPWAKLLSQ FPQNPHLVMR GSVFTVGRRA CDLCIRDHSM PNVLCELRQS EHGGPSVASL EIIGNGVLVQ VNGKIYQRST
0201: CVHLRGGDEI IFTTPGKHAY IFQPLKDENL AAPDRTSSLS LFEAQSAPLK GLHVETRARD SSSVDGTASL LASISKLQNV PFLPPTAKSV KRQQNSEVPV
0301: LPSSCDDFIL DVDLNDADSN NDHAAIASME KTVASTSCAA NDDHDADGNG MDPFQEPEAG NIPDPAYEIR PILSLLGDPS EFDLRGSISK ILVDERREVR
0401: EMPKEYERPS ASVLTRRQAH KDSLRGGILN PQDIEVSFEN FPYFLSGTTK DVLMISTYAH IKYGKEYAEY ASDLPTACPR ILLSGPSGSE IYQEMLAKAL
0501: AKQCGAKLMI VDSLLLPGGS TPKEADTTKE SSRRERLSVL AKRAVQAAQA AVLQHKKPIS SVEAGITGGS TLSSQAVRRQ EVSTATSKSY TFKAGDRVRF
0601: LGPSTSSLAS LRAPPRGPAT GFQGKVLLAF EGNGSSKIGV RFDRSIPDGN DLGGLCEEDH GFFCTASSLR LESSSSDDAD KLAINEIFEV AFNESERGSL
0701: ILFLKDIEKS VSGNTDVYIT LKSKLENLPE NIVVIASQTQ LDNRKEKSHP GGFLFTKFGS NQTALLDLAF PDTFGGRLQD RNTEMPKAVK QITRLFPNKV
0801: TIQLPEDEAS LVDWKDKLER DTEILKAQAN ITSIRAVLSK NQLVCPDIEI LCIKDQTLPS DSVEKVVGFA FNHHLMNCSE PTVKDNKLII SAESITYGLQ
0901: LLHEIQNENK STKKSLKDVV TENEFEKKLL SDVIPPSDIG VSFSDIGALE NVKDTLKELV MLPLQRPELF GKGQLTKPTK GILLFGPPGT GKTMLAKAVA
1001: TEAGANFINI SMSSITSKWF GEGEKYVKAV FSLASKIAPS VIFVDEVDSM LGRRENPGEH EAMRKMKNEF MINWDGLRTK DKERVLVLAA TNRPFDLDEA
1101: VIRRLPRRLM VNLPDSANRS KILSVILAKE EMAEDVDLEA IANMTDGYSG SDLKNLCVTA AHLPIREILE KEKKERSVAQ AENRAMPQLY SSTDVRPLNM
1201: NDFKTAHDQV CASVASDSSN MNELQQWNEL YGEGGSRKKT SLSYFM

Arabidopsis Description

AAA-type ATPase family protein [Source:UniProtKB/TrEMBL;Acc:F4HZ82]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.