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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY17260 Canola cytosol 97.15 97.91
Bra005414.1-P Field mustard cytosol 97.15 95.66
CDX84641 Canola cytosol 91.45 94.13
CDX79566 Canola cytosol 90.67 93.09
AT2G34560.2 Thale cress cytosol 89.12 87.53
VIT_10s0003g03500.t01 Wine grape cytosol 75.65 73.55
Solyc02g070440.2.1 Tomato cytosol 73.06 73.06
PGSC0003DMT400054532 Potato cytosol 72.54 72.16
KRH58481 Soybean cytosol 73.83 70.72
GSMUA_Achr10P... Banana cytosol 70.73 70.54
KRH42362 Soybean cytosol, endoplasmic reticulum 73.83 70.37
TraesCS3B01G305600.2 Wheat cytosol 71.24 69.62
Os01t0757400-02 Rice cytosol 69.43 69.43
TraesCS3A01G294400.1 Wheat cytosol 67.88 69.31
EES01499 Sorghum cytosol 68.39 69.29
HORVU3Hr1G072910.6 Barley cytosol 67.1 68.88
TraesCS3A01G271900.1 Wheat cytosol 71.24 68.75
TraesCS3D01G271500.1 Wheat cytosol 70.98 68.5
TraesCS3B01G329000.2 Wheat cytosol 67.88 67.7
GSMUA_Achr7P25300_001 Banana cytosol 71.24 67.57
Os01t0673500-01 Rice cytosol 71.76 67.56
OQU87315 Sorghum cytosol 70.47 67.49
Zm00001d043410_P002 Maize cytosol 67.88 63.13
TraesCS3D01G294200.1 Wheat plastid 68.39 59.59
HORVU3Hr1G061800.1 Barley cytosol, plastid 70.47 58.49
Zm00001d011563_P019 Maize mitochondrion 70.98 52.19
CDY18925 Canola plastid 35.23 37.57
CDX95077 Canola cytosol 37.05 33.18
CDX93578 Canola cytosol 36.79 33.02
CDY31186 Canola cytosol 36.79 32.72
CDX71438 Canola cytosol 36.01 32.4
CDX83275 Canola cytosol 36.27 32.33
CDY04504 Canola cytosol 36.01 32.18
CDY37590 Canola cytosol 39.9 30.14
CDY38662 Canola cytosol 39.9 29.84
CDX79393 Canola cytosol 40.41 29.49
CDY57698 Canola cytosol 39.9 29.0
CDX74745 Canola cytosol 35.49 28.84
CDY19035 Canola endoplasmic reticulum 29.02 28.57
CDY71574 Canola endoplasmic reticulum, plasma membrane 29.02 28.57
CDY29857 Canola endoplasmic reticulum, plasma membrane 28.76 28.39
CDX92836 Canola endoplasmic reticulum, plasma membrane 28.76 28.39
CDY30236 Canola endoplasmic reticulum 28.76 28.32
CDY55344 Canola endoplasmic reticulum 28.76 28.32
CDY38752 Canola endoplasmic reticulum 27.72 27.72
CDY14372 Canola endoplasmic reticulum 28.5 27.71
CDY20251 Canola endoplasmic reticulum 28.5 27.36
CDY37046 Canola cytosol 36.01 27.2
CDY47077 Canola endoplasmic reticulum, plasma membrane 27.2 26.99
CDY24618 Canola endoplasmic reticulum 18.91 25.98
CDX92656 Canola cytosol 26.42 23.67
CDY28494 Canola plastid 38.08 22.69
CDY34176 Canola plastid 37.82 22.53
CDY27380 Canola nucleus 36.01 18.73
CDX96166 Canola cytosol 31.87 18.11
CDY49165 Canola extracellular, plasma membrane 32.64 16.13
CDY19639 Canola extracellular, vacuole 33.16 15.94
CDY56163 Canola extracellular, vacuole 33.16 15.9
CDY51824 Canola extracellular, plasma membrane 33.16 15.88
CDY38192 Canola plasma membrane 32.64 15.16
CDY08360 Canola endoplasmic reticulum 32.38 15.04
CDY45052 Canola mitochondrion 33.42 12.91
CDY03591 Canola cytosol, mitochondrion, plastid 32.9 12.71
CDX89214 Canola extracellular, plasma membrane 24.61 12.53
CDX91317 Canola plastid 33.94 12.38
CDY32485 Canola plastid 35.23 12.34
CDX90936 Canola plastid 34.46 12.16
CDY33415 Canola cytosol, mitochondrion 31.35 11.91
CDY42204 Canola cytosol, mitochondrion, plastid 31.61 11.72
CDX89933 Canola plastid 34.72 11.59
CDX97266 Canola plastid 33.94 11.58
CDY19014 Canola endoplasmic reticulum, extracellular 21.5 11.56
CDY18129 Canola cytosol, plastid 34.97 11.12
CDY50381 Canola plastid 34.46 11.07
CDY18018 Canola plastid 34.72 10.98
CDX92857 Canola endoplasmic reticulum, extracellular, plasma membrane 19.69 10.8
CDY22053 Canola plastid 34.2 10.74
CDY29873 Canola endoplasmic reticulum, extracellular, plasma membrane 19.17 10.56
CDX89934 Canola cytosol 0.26 0.38
Protein Annotations
EnsemblPlants:CDX84306EnsemblPlantsGene:GSBRNA2T00141410001Gene3D:1.10.8.60Gene3D:3.40.50.300GO:A0A078D4N5GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005524InterPro:AAA+_ATPaseInterPro:ATPase_AAA_coreInterPro:P-loop_NTPase
PANTHER:PTHR23074PANTHER:PTHR23074:SF92PFAM:PF00004ProteinID:CDX84306ProteinID:CDX84306.1SEG:seg
SMART:SM00382SUPFAM:SSF52540UniParc:UPI0004EEE3EFMapMan:50.3.6::
Description
BnaC04g10680D
Coordinates
chrLK031836:-:1697689..1700308
Molecular Weight (calculated)
43086.5 Da
IEP (calculated)
5.391
GRAVY (calculated)
-0.476
Length
386 amino acids
Sequence
(BLAST)
001: MTTDEPSLTR WSFLFGRKKL PEEPQESKPE DDGSSSNKEE DASQVATNPA QEGNTSLANG IREKPKPKKS MFPPFESAET RALAESLSRQ VIVDIIRGNP
101: NVKWESIKGL ENAKRLLKEA VVMPIKYPSY FNGLLSPWKG ILLFGPPGTG KTMLAKAVAT ECNTTFFNIS ASSVVSKWRG DSEKLIRVLF DLARHHAPAT
201: IFLDEIDAII SQRGGEGRSE HEASRRLKTE LLIQMDGLQK TNELVFVLAA TNLPWELDAA MLRRLEKRIL VPLPDPEARR GMFEMLLPSQ PGDEPLPHDV
301: LVEKSEGYSG SDIRILCKEA AMQPLRRTLA SLEDTEEIVP EDELPKVGPI LPEDIDRALS NTRPSAHLHA HLYDKFNDDY GSQILK
Best Arabidopsis Sequence Match ( AT2G34560.1 )
(BLAST)
001: MATDEPSQTR WSFLFGRKKL PEEDVSNKDQ PEDGSSNGNN GDVNNNSSPV TNQDGNTALA NGNVIREKPK KSMFPPFESA ETRTLAESLS RDIIRGNPNI
101: KWESIKGLEN AKKLLKEAVV MPIKYPTYFN GLLTPWKGIL LFGPPGTGKT MLAKAVATEC NTTFFNISAS SVVSKWRGDS EKLIRVLFDL ARHHAPSTIF
201: LDEIDAIISQ RGGEGRSEHE ASRRLKTELL IQMDGLQKTN ELVFVLAATN LPWELDAAML RRLEKRILVP LPDPEARRGM FEMLIPSQPG DEPLPHDVLV
301: EKSEGYSGSD IRILCKEAAM QPLRRTLAIL EDREDVVPED ELPKIGPILP EDIDRALSNT RPSAHLHAHL YDKFNDDYGS QILK
Arabidopsis Description
AT2G34560 protein [Source:UniProtKB/TrEMBL;Acc:B9DGC0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.