CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0673500-01	Rice	cytosol	89.83	88.29
TraesCS3B01G305600.2	Wheat	cytosol	84.86	86.58
TraesCS3A01G271900.1	Wheat	cytosol	85.11	85.75
TraesCS3D01G271500.1	Wheat	cytosol	84.37	85.0
EES01499	Sorghum	cytosol	77.67	82.15
GSMUA_Achr10P...	Banana	cytosol	75.68	78.81
Solyc02g070440.2.1	Tomato	cytosol	71.22	74.35
PGSC0003DMT400054532	Potato	cytosol	71.22	73.97
KRH58481	Soybean	cytosol	73.45	73.45
VIT_10s0003g03500.t01	Wine grape	cytosol	72.21	73.3
KRH42362	Soybean	cytosol, endoplasmic reticulum	73.45	73.09
HORVU3Hr1G061800.1	Barley	cytosol, plastid	84.12	72.9
CDX84641	Canola	cytosol	66.75	71.73
Zm00001d011563_P019	Maize	mitochondrion	93.3	71.62
CDY17260	Canola	cytosol	67.99	71.54
CDX79566	Canola	cytosol	66.25	71.01
CDX84306	Canola	cytosol	67.49	70.47
Bra005414.1-P	Field mustard	cytosol	68.49	70.41
AT2G34560.2	Thale cress	cytosol	67.25	68.96
Bra022979.1-P	Field mustard	plastid	66.75	46.62
EES00346	Sorghum	cytosol	37.22	34.4
EER87773	Sorghum	cytosol	36.23	29.8
EES01274	Sorghum	cytosol	37.97	29.48
KXG20883	Sorghum	endoplasmic reticulum	27.79	28.64
KXG19781	Sorghum	cytosol	35.98	27.26
KXG23422	Sorghum	nucleus	36.48	21.37
KXG32842	Sorghum	cytosol	31.76	16.52
EES20020	Sorghum	endoplasmic reticulum	31.27	14.96
KXG32925	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	30.77	14.94
EES00021	Sorghum	endoplasmic reticulum	30.52	14.52
OQU76102	Sorghum	mitochondrion	32.01	13.33
EES05524	Sorghum	plastid	32.01	13.07
EES16128	Sorghum	cytosol, plastid	29.53	12.77
OQU79278	Sorghum	cytosol, plastid	27.54	12.04
OQU90457	Sorghum	cytosol, plastid	32.51	11.97
EER92288	Sorghum	cytosol	32.75	11.89
KXG29076	Sorghum	plastid	33.25	10.85

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:50.3.6	EntrezGene:8068000	UniProt:A0A1W0VYX7	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_core	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlants:OQU87315
ProteinID:OQU87315	ProteinID:OQU87315.1	InterPro:P-loop_NTPase	PFAM:PF00004	PANTHER:PTHR23074	PANTHER:PTHR23074:SF92
SMART:SM00382	EnsemblPlantsGene:SORBI_3003G252900	SUPFAM:SSF52540	UniParc:UPI0001A84AA8	RefSeq:XP_002458300.1	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:59173550..59181167

Molecular Weight (calculated)

45248.2 Da

IEP (calculated)

5.703

GRAVY (calculated)

-0.449

Length

403 amino acids

Sequence
(BLAST)

001: MADGEPSLTR WTFEDFVVYY ETRLGIRREA NGDDGDEGPT PRGSDHAAGH RPAAARANGG GADLAVFEQF ERMERKVEIR NGAIEDGPPQ KPLLPSFESA
101: EMRNLAETLL RDIIRGSPDV KWESIKGLEN AKRLLKEAVV MPIKYPKYFT GLLSPWKGIL LFGPPGTGKT MLAKAVATEC KTTFFNISAS SIVSKWRGDS
201: EKLVKVLFEL ARHHAPSTIF LDEIDAIISQ RGEARSEHEA SRRLKTELLI QMDGLTKTDE LVFVLAATNL PWELDAAMLR RLEKRILVPL PEPDARQAMF
301: EELLPSTPGK MEIPYNVLVE KTEGYSGSDI RLVCKEAAMQ PLRRLMTVLE RRQEEVPEDE LPEVGPVTTE DIELALRNTR PSAHLHAHRY EKFNQDYGSH
401: VHG

Best Arabidopsis Sequence Match ( AT2G34560.2 )
(BLAST)

001: MATDEPSQTR WSFLEFKTFY DAKFGRKKLP EEDVSNKDQP EDGSSNGNNG DVNNNSSPVT NQDGNTALAN GNVIREKPKK SMFPPFESAE TRTLAESLSR
101: DIIRGNPNIK WESIKGLENA KKLLKEAVVM PIKYPTYFNG LLTPWKGILL FGPPGTGKTM LAKAVATECN TTFFNISASS VVSKWRGDSE KLIRVLFDLA
201: RHHAPSTIFL DEIDAIISQR GGEGRSEHEA SRRLKTELLI QMDGLQKTNE LVFVLAATNL PWELDAAMLR RLEKRILVPL PDPEARRGMF EMLIPSQPGD
301: EPLPHDVLVE KSEGYSGSDI RILCKEAAMQ PLRRTLAILE DREDVVPEDE LPKIGPILPE DIDRALSNTR PSAHLHAHLY DKFNDDYGSQ ILK

Arabidopsis Description

AT2G34560 protein [Source:UniProtKB/TrEMBL;Acc:B9DGC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.